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E6PBS1

- E6PBS1_TETTH

UniProt

E6PBS1 - E6PBS1_TETTH

Protein
Submitted name:

40S ribosomal protein rpS3e

Gene
N/A
Organism
Tetrahymena thermophila
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. RNA binding Source: InterPro
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    40S ribosomal protein rpS3eImported
    OrganismiTetrahymena thermophilaImported
    Taxonomic identifieri5911 [NCBI]
    Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

    Subcellular locationi

    GO - Cellular componenti

    1. small ribosomal subunit Source: InterPro

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4BPEX-ray3.70C1-243[»]
    4BPNX-ray3.70C1-243[»]
    4BPOX-ray3.70C1-243[»]
    4BPPX-ray3.70C1-243[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S3P family.UniRule annotation

    Phylogenomic databases

    KOiK02985.

    Family and domain databases

    Gene3Di3.30.1140.32. 1 hit.
    3.30.300.20. 1 hit.
    InterProiIPR015946. KH_dom-like_a/b.
    IPR004044. KH_dom_type_2.
    IPR009019. KH_prok-type.
    IPR001351. Ribosomal_S3_C.
    IPR005703. Ribosomal_S3_euk/arc.
    [Graphical view]
    PfamiPF07650. KH_2. 1 hit.
    PF00189. Ribosomal_S3_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF54814. SSF54814. 1 hit.
    SSF54821. SSF54821. 1 hit.
    TIGRFAMsiTIGR01008. rpsC_E_A. 1 hit.
    PROSITEiPS50823. KH_TYPE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E6PBS1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDKTTRAINK KKKFVADGVF NAELHSFFSK SLQDAGYAGI EVRRTPTKTE    50
    IRIKATKPQQ VIGVEGKKHK ELTQFLQKRF GYSDDQIQIW AEPIKFKGLC 100
    ASAQVEAMNY KLLKDVPVRL AANYIIKSVI QDGAKGCEII ISGKLKQQRA 150
    KTMKFKQGYM ICTGQPKNDY IDVAVRHVFF KQGIMGVKVK IMLPYEPNPA 200
    KKFGVKTPIP DNVIIHPPKQ ITDDKEIRTA VEQQQPAQPE QQQ 243
    Length:243
    Mass (Da):27,531
    Last modified:March 8, 2011 - v1
    Checksum:iFBEE0BBCB866194C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BK007910 mRNA. Translation: DAA33967.1.
    RefSeqiXP_001030083.3. XM_001030083.3.
    UniGeneiTth.3505.

    Genome annotation databases

    GeneIDi7830325.
    KEGGitet:TTHERM_01151500.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BK007910 mRNA. Translation: DAA33967.1 .
    RefSeqi XP_001030083.3. XM_001030083.3.
    UniGenei Tth.3505.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4BPE X-ray 3.70 C 1-243 [» ]
    4BPN X-ray 3.70 C 1-243 [» ]
    4BPO X-ray 3.70 C 1-243 [» ]
    4BPP X-ray 3.70 C 1-243 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 7830325.
    KEGGi tet:TTHERM_01151500.

    Phylogenomic databases

    KOi K02985.

    Family and domain databases

    Gene3Di 3.30.1140.32. 1 hit.
    3.30.300.20. 1 hit.
    InterProi IPR015946. KH_dom-like_a/b.
    IPR004044. KH_dom_type_2.
    IPR009019. KH_prok-type.
    IPR001351. Ribosomal_S3_C.
    IPR005703. Ribosomal_S3_euk/arc.
    [Graphical view ]
    Pfami PF07650. KH_2. 1 hit.
    PF00189. Ribosomal_S3_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54814. SSF54814. 1 hit.
    SSF54821. SSF54821. 1 hit.
    TIGRFAMsi TIGR01008. rpsC_E_A. 1 hit.
    PROSITEi PS50823. KH_TYPE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1."
      Rabl J., Leibundgut M., Ataide S.F., Haag A., Ban N.
      Science 331:730-736(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
    2. "The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A."
      Weisser M., Voigts-Hoffmann F., Rabl J., Leibundgut M., Ban N.
      Nat. Struct. Mol. Biol. 20:1015-1017(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.70 ANGSTROMS).

    Entry informationi

    Entry nameiE6PBS1_TETTH
    AccessioniPrimary (citable) accession number: E6PBS1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3