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E6PBS1 (E6PBS1_TETTH) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismTetrahymena thermophila EMBL DAA33967.1
Taxonomic identifier5911 [NCBI]
Taxonomic lineageEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

Protein attributes

Sequence length243 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S3P family. RuleBase RU003624

Sequences

Sequence LengthMass (Da)Tools
E6PBS1 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: FBEE0BBCB866194C

FASTA24327,531
        10         20         30         40         50         60 
MDKTTRAINK KKKFVADGVF NAELHSFFSK SLQDAGYAGI EVRRTPTKTE IRIKATKPQQ 

        70         80         90        100        110        120 
VIGVEGKKHK ELTQFLQKRF GYSDDQIQIW AEPIKFKGLC ASAQVEAMNY KLLKDVPVRL 

       130        140        150        160        170        180 
AANYIIKSVI QDGAKGCEII ISGKLKQQRA KTMKFKQGYM ICTGQPKNDY IDVAVRHVFF 

       190        200        210        220        230        240 
KQGIMGVKVK IMLPYEPNPA KKFGVKTPIP DNVIIHPPKQ ITDDKEIRTA VEQQQPAQPE 


QQQ 

« Hide

References

[1]"Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1."
Rabl J., Leibundgut M., Ataide S.F., Haag A., Ban N.
Science 331:730-736(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A."
Weisser M., Voigts-Hoffmann F., Rabl J., Leibundgut M., Ban N.
Nat. Struct. Mol. Biol. 20:1015-1017(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (3.70 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BK007910 mRNA. Translation: DAA33967.1.
RefSeqXP_001030083.3. XM_001030083.3.
UniGeneTth.3505.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4BPEX-ray3.70C1-243[»]
4BPNX-ray3.70C1-243[»]
4BPOX-ray3.70C1-243[»]
4BPPX-ray3.70C1-243[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7830325.
KEGGtet:TTHERM_01151500.

Phylogenomic databases

KOK02985.

Family and domain databases

Gene3D3.30.1140.32. 1 hit.
3.30.300.20. 1 hit.
InterProIPR015946. KH_dom-like_a/b.
IPR004044. KH_dom_type_2.
IPR009019. KH_prok-type.
IPR001351. Ribosomal_S3_C.
IPR005703. Ribosomal_S3_euk/arc.
[Graphical view]
PfamPF07650. KH_2. 1 hit.
PF00189. Ribosomal_S3_C. 1 hit.
[Graphical view]
SUPFAMSSF54814. SSF54814. 1 hit.
SSF54821. SSF54821. 1 hit.
TIGRFAMsTIGR01008. rpsC_E_A. 1 hit.
PROSITEPS50823. KH_TYPE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE6PBS1_TETTH
AccessionPrimary (citable) accession number: E6PBS1
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: July 9, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)