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E6PBS0 (E6PBS0_TETTH) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismTetrahymena thermophila EMBL DAA33966.1
Taxonomic identifier5911 [NCBI]
Taxonomic lineageEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

Protein attributes

Sequence length296 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Miscellaneous

The sequence shown here is derived from an EMBL/GenBank/DDBJ third party annotation (TPA) entry. EMBL DAA33966.1

Sequence similarities

Belongs to the ribosomal protein S5P family. RuleBase RU003823

Sequences

Sequence LengthMass (Da)Tools
E6PBS0 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: 38414CCBC0823C44

FASTA29633,680
        10         20         30         40         50         60 
MAQRTEKRGF GNKKGPRGDR RGDKNDWQPQ TKLGRLVKYG KISSLDEIFK YSIPIKEPEI 

        70         80         90        100        110        120 
IDHFYPKNKD VQAEHKLMEE VLQITPVQKQ TQAGQRTRFK GFVVVGDSNG HIGLGWKVAK 

       130        140        150        160        170        180 
EVQGAIKGAI THAKLNMVPV RKGYWGNKIA NAHTIPQKIT GKSGSVRIRL VPAPRGTGIV 

       190        200        210        220        230        240 
AAPIPKKVLQ FAGVQDIYTS SQGCTRTRGN FLKATYYALA NTYRYLTPDF WGKPEDNELP 

       250        260        270        280        290 
FETFSEFLHT KAQKKEPKQY ENKREKKHFD RPRREHGDRQ PRGEKKTEEV PATEAQ 

« Hide

References

[1]"Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1."
Rabl J., Leibundgut M., Ataide S.F., Haag A., Ban N.
Science 0:0-0(2011)
Cited for: NUCLEOTIDE SEQUENCE.
[2]"The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A."
Weisser M., Voigts-Hoffmann F., Rabl J., Leibundgut M., Ban N.
Nat. Struct. Mol. Biol. 20:1015-1017(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (3.70 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BK007909 mRNA. Translation: DAA33966.1.
RefSeqXP_001017127.3. XM_001017127.3.
UniGeneTth.1535.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4BPEX-ray3.70E1-296[»]
4BPNX-ray3.70E1-296[»]
4BPOX-ray3.70E1-296[»]
4BPPX-ray3.70E1-296[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7844600.
KEGGtet:TTHERM_00193740.

Family and domain databases

Gene3D3.30.160.20. 1 hit.
3.30.230.10. 1 hit.
InterProIPR014720. dsRNA-bd_dom.
IPR000851. Ribosomal_S5.
IPR005324. Ribosomal_S5_C.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR005711. Ribosomal_S5_euk/arc.
IPR013810. Ribosomal_S5_N.
[Graphical view]
PANTHERPTHR13718. PTHR13718. 1 hit.
PfamPF00333. Ribosomal_S5. 1 hit.
PF03719. Ribosomal_S5_C. 1 hit.
[Graphical view]
SUPFAMSSF54211. SSF54211. 1 hit.
TIGRFAMsTIGR01020. rpsE_arch. 1 hit.
PROSITEPS50881. S5_DSRBD. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE6PBS0_TETTH
AccessionPrimary (citable) accession number: E6PBS0
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: December 11, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)