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E6PBS0

- E6PBS0_TETTH

UniProt

E6PBS0 - E6PBS0_TETTH

Protein
Submitted name:

40S ribosomal protein rpS2e

Gene
N/A
Organism
Tetrahymena thermophila
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. RNA binding Source: InterPro
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    40S ribosomal protein rpS2eImported
    OrganismiTetrahymena thermophilaImported
    Taxonomic identifieri5911 [NCBI]
    Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

    Subcellular locationi

    GO - Cellular componenti

    1. small ribosomal subunit Source: InterPro

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4BPEX-ray3.70E1-296[»]
    4BPNX-ray3.70E1-296[»]
    4BPOX-ray3.70E1-296[»]
    4BPPX-ray3.70E1-296[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S5P family.UniRule annotation

    Phylogenomic databases

    KOiK02981.

    Family and domain databases

    Gene3Di3.30.160.20. 1 hit.
    3.30.230.10. 1 hit.
    InterProiIPR014720. dsRNA-bd_dom.
    IPR000851. Ribosomal_S5.
    IPR005324. Ribosomal_S5_C.
    IPR020568. Ribosomal_S5_D2-typ_fold.
    IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
    IPR005711. Ribosomal_S5_euk/arc.
    IPR013810. Ribosomal_S5_N.
    [Graphical view]
    PANTHERiPTHR13718. PTHR13718. 1 hit.
    PfamiPF00333. Ribosomal_S5. 1 hit.
    PF03719. Ribosomal_S5_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF54211. SSF54211. 1 hit.
    TIGRFAMsiTIGR01020. rpsE_arch. 1 hit.
    PROSITEiPS50881. S5_DSRBD. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E6PBS0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAQRTEKRGF GNKKGPRGDR RGDKNDWQPQ TKLGRLVKYG KISSLDEIFK    50
    YSIPIKEPEI IDHFYPKNKD VQAEHKLMEE VLQITPVQKQ TQAGQRTRFK 100
    GFVVVGDSNG HIGLGWKVAK EVQGAIKGAI THAKLNMVPV RKGYWGNKIA 150
    NAHTIPQKIT GKSGSVRIRL VPAPRGTGIV AAPIPKKVLQ FAGVQDIYTS 200
    SQGCTRTRGN FLKATYYALA NTYRYLTPDF WGKPEDNELP FETFSEFLHT 250
    KAQKKEPKQY ENKREKKHFD RPRREHGDRQ PRGEKKTEEV PATEAQ 296
    Length:296
    Mass (Da):33,680
    Last modified:March 8, 2011 - v1
    Checksum:i38414CCBC0823C44
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BK007909 mRNA. Translation: DAA33966.1.
    RefSeqiXP_001017127.3. XM_001017127.3.
    UniGeneiTth.1535.

    Genome annotation databases

    GeneIDi7844600.
    KEGGitet:TTHERM_00193740.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BK007909 mRNA. Translation: DAA33966.1 .
    RefSeqi XP_001017127.3. XM_001017127.3.
    UniGenei Tth.1535.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4BPE X-ray 3.70 E 1-296 [» ]
    4BPN X-ray 3.70 E 1-296 [» ]
    4BPO X-ray 3.70 E 1-296 [» ]
    4BPP X-ray 3.70 E 1-296 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 7844600.
    KEGGi tet:TTHERM_00193740.

    Phylogenomic databases

    KOi K02981.

    Family and domain databases

    Gene3Di 3.30.160.20. 1 hit.
    3.30.230.10. 1 hit.
    InterProi IPR014720. dsRNA-bd_dom.
    IPR000851. Ribosomal_S5.
    IPR005324. Ribosomal_S5_C.
    IPR020568. Ribosomal_S5_D2-typ_fold.
    IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
    IPR005711. Ribosomal_S5_euk/arc.
    IPR013810. Ribosomal_S5_N.
    [Graphical view ]
    PANTHERi PTHR13718. PTHR13718. 1 hit.
    Pfami PF00333. Ribosomal_S5. 1 hit.
    PF03719. Ribosomal_S5_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54211. SSF54211. 1 hit.
    TIGRFAMsi TIGR01020. rpsE_arch. 1 hit.
    PROSITEi PS50881. S5_DSRBD. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1."
      Rabl J., Leibundgut M., Ataide S.F., Haag A., Ban N.
      Science 331:730-736(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
    2. "The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A."
      Weisser M., Voigts-Hoffmann F., Rabl J., Leibundgut M., Ban N.
      Nat. Struct. Mol. Biol. 20:1015-1017(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.70 ANGSTROMS).

    Entry informationi

    Entry nameiE6PBS0_TETTH
    AccessioniPrimary (citable) accession number: E6PBS0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3