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E6PBR9

- E6PBR9_TETTH

UniProt

E6PBR9 - E6PBR9_TETTH

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Protein
40S ribosomal protein SA
Gene
N/A
Organism
Tetrahymena thermophila
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits By similarity.UniRule annotation

GO - Molecular functioni

  1. structural constituent of ribosome Source: UniProtKB-HAMAP

GO - Biological processi

  1. ribosomal small subunit assembly Source: UniProtKB-HAMAP
  2. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationSAAS annotationsImported

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein SAUniRule annotation
OrganismiTetrahymena thermophilaImported
Taxonomic identifieri5911 [NCBI]
Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytosolic small ribosomal subunit Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotations

Interactioni

Subunit structurei

Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (25S, 5.8S and 5S). Interacts with ribosomal protein S21 By similarity.UniRule annotation

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2XZMX-ray3.93B1-241[»]
2XZNX-ray3.93B1-241[»]
4BPEX-ray3.70B1-241[»]
4BPNX-ray3.70B1-241[»]
4BPOX-ray3.70B1-241[»]
4BPPX-ray3.70B1-241[»]

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK02998.

Family and domain databases

HAMAPiMF_03015. Ribosomal_S2_euk.
InterProiIPR001865. Ribosomal_S2.
IPR018130. Ribosomal_S2_CS.
IPR027498. Ribosomal_S2_euk.
IPR005707. Ribosomal_S2_euk/arc.
IPR023591. Ribosomal_S2_flav_dom.
[Graphical view]
PANTHERiPTHR11489. PTHR11489. 1 hit.
PfamiPF00318. Ribosomal_S2. 1 hit.
[Graphical view]
PRINTSiPR00395. RIBOSOMALS2.
SUPFAMiSSF52313. SSF52313. 1 hit.
TIGRFAMsiTIGR01012. Sa_S2_E_A. 1 hit.
PROSITEiPS00963. RIBOSOMAL_S2_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E6PBR9-1 [UniParc]FASTAAdd to Basket

« Hide

MATQRKQDDI KRLLASNCHQ ATINLNNQMK RYISHKGVNG IHYINIEETW    50
QKIKLAARVI AAVQHPEDVM VVCSRIYGQR AAIKFAGYTH CKSTSSSRWT 100
PGTLTNYQTL KYEEPRVLIV TDPRSDFQAI KEASYVNIPV IALCDSDSPL 150
AYVDVVIPCN NRSTESISMI YWMIAREVKI LRGELSKDEE WEVMVDLFYH 200
KTLPTAEQKE AEEEEGAEGA EEKVAEVKEG EAEQNTDNKN W 241
Length:241
Mass (Da):27,498
Last modified:March 8, 2011 - v1
Checksum:iA9903E147B825EF6
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BK007908 mRNA. Translation: DAA33965.1.
RefSeqiXP_001014441.2. XM_001014441.2.
UniGeneiTth.3056.

Genome annotation databases

GeneIDi7838059.
KEGGitet:TTHERM_00522630.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BK007908 mRNA. Translation: DAA33965.1 .
RefSeqi XP_001014441.2. XM_001014441.2.
UniGenei Tth.3056.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
2XZM X-ray 3.93 B 1-241 [» ]
2XZN X-ray 3.93 B 1-241 [» ]
4BPE X-ray 3.70 B 1-241 [» ]
4BPN X-ray 3.70 B 1-241 [» ]
4BPO X-ray 3.70 B 1-241 [» ]
4BPP X-ray 3.70 B 1-241 [» ]
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 7838059.
KEGGi tet:TTHERM_00522630.

Phylogenomic databases

KOi K02998.

Family and domain databases

HAMAPi MF_03015. Ribosomal_S2_euk.
InterProi IPR001865. Ribosomal_S2.
IPR018130. Ribosomal_S2_CS.
IPR027498. Ribosomal_S2_euk.
IPR005707. Ribosomal_S2_euk/arc.
IPR023591. Ribosomal_S2_flav_dom.
[Graphical view ]
PANTHERi PTHR11489. PTHR11489. 1 hit.
Pfami PF00318. Ribosomal_S2. 1 hit.
[Graphical view ]
PRINTSi PR00395. RIBOSOMALS2.
SUPFAMi SSF52313. SSF52313. 1 hit.
TIGRFAMsi TIGR01012. Sa_S2_E_A. 1 hit.
PROSITEi PS00963. RIBOSOMAL_S2_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1."
    Rabl J., Leibundgut M., Ataide S.F., Haag A., Ban N.
    Science 331:730-736(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.93 ANGSTROMS).
  2. "The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A."
    Weisser M., Voigts-Hoffmann F., Rabl J., Leibundgut M., Ban N.
    Nat. Struct. Mol. Biol. 20:1015-1017(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.70 ANGSTROMS).

Entry informationi

Entry nameiE6PBR9_TETTH
AccessioniPrimary (citable) accession number: E6PBR9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: July 9, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3

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