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E6PBR9

- E6PBR9_TETTH

UniProt

E6PBR9 - E6PBR9_TETTH

Protein

40S ribosomal protein SA

Gene
N/A
Organism
Tetrahymena thermophila
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 20 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.UniRule annotation

    GO - Molecular functioni

    1. structural constituent of ribosome Source: UniProtKB-HAMAP

    GO - Biological processi

    1. ribosomal small subunit assembly Source: UniProtKB-HAMAP
    2. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinUniRule annotationSAAS annotationImported

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    40S ribosomal protein SAUniRule annotation
    OrganismiTetrahymena thermophilaImported
    Taxonomic identifieri5911 [NCBI]
    Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytosolic small ribosomal subunit Source: UniProtKB-HAMAP

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Interactioni

    Subunit structurei

    Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (25S, 5.8S and 5S). Interacts with ribosomal protein S21.UniRule annotation

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2XZMX-ray3.93B1-241[»]
    2XZNX-ray3.93B1-241[»]
    4BPEX-ray3.70B1-241[»]
    4BPNX-ray3.70B1-241[»]
    4BPOX-ray3.70B1-241[»]
    4BPPX-ray3.70B1-241[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S2P family.UniRule annotation

    Phylogenomic databases

    KOiK02998.

    Family and domain databases

    HAMAPiMF_03015. Ribosomal_S2_euk.
    InterProiIPR001865. Ribosomal_S2.
    IPR018130. Ribosomal_S2_CS.
    IPR027498. Ribosomal_S2_euk.
    IPR005707. Ribosomal_S2_euk/arc.
    IPR023591. Ribosomal_S2_flav_dom.
    [Graphical view]
    PANTHERiPTHR11489. PTHR11489. 1 hit.
    PfamiPF00318. Ribosomal_S2. 1 hit.
    [Graphical view]
    PRINTSiPR00395. RIBOSOMALS2.
    SUPFAMiSSF52313. SSF52313. 1 hit.
    TIGRFAMsiTIGR01012. Sa_S2_E_A. 1 hit.
    PROSITEiPS00963. RIBOSOMAL_S2_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E6PBR9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MATQRKQDDI KRLLASNCHQ ATINLNNQMK RYISHKGVNG IHYINIEETW    50
    QKIKLAARVI AAVQHPEDVM VVCSRIYGQR AAIKFAGYTH CKSTSSSRWT 100
    PGTLTNYQTL KYEEPRVLIV TDPRSDFQAI KEASYVNIPV IALCDSDSPL 150
    AYVDVVIPCN NRSTESISMI YWMIAREVKI LRGELSKDEE WEVMVDLFYH 200
    KTLPTAEQKE AEEEEGAEGA EEKVAEVKEG EAEQNTDNKN W 241
    Length:241
    Mass (Da):27,498
    Last modified:March 8, 2011 - v1
    Checksum:iA9903E147B825EF6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BK007908 mRNA. Translation: DAA33965.1.
    RefSeqiXP_001014441.2. XM_001014441.2.
    UniGeneiTth.3056.

    Genome annotation databases

    GeneIDi7838059.
    KEGGitet:TTHERM_00522630.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BK007908 mRNA. Translation: DAA33965.1 .
    RefSeqi XP_001014441.2. XM_001014441.2.
    UniGenei Tth.3056.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2XZM X-ray 3.93 B 1-241 [» ]
    2XZN X-ray 3.93 B 1-241 [» ]
    4BPE X-ray 3.70 B 1-241 [» ]
    4BPN X-ray 3.70 B 1-241 [» ]
    4BPO X-ray 3.70 B 1-241 [» ]
    4BPP X-ray 3.70 B 1-241 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 7838059.
    KEGGi tet:TTHERM_00522630.

    Phylogenomic databases

    KOi K02998.

    Family and domain databases

    HAMAPi MF_03015. Ribosomal_S2_euk.
    InterProi IPR001865. Ribosomal_S2.
    IPR018130. Ribosomal_S2_CS.
    IPR027498. Ribosomal_S2_euk.
    IPR005707. Ribosomal_S2_euk/arc.
    IPR023591. Ribosomal_S2_flav_dom.
    [Graphical view ]
    PANTHERi PTHR11489. PTHR11489. 1 hit.
    Pfami PF00318. Ribosomal_S2. 1 hit.
    [Graphical view ]
    PRINTSi PR00395. RIBOSOMALS2.
    SUPFAMi SSF52313. SSF52313. 1 hit.
    TIGRFAMsi TIGR01012. Sa_S2_E_A. 1 hit.
    PROSITEi PS00963. RIBOSOMAL_S2_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1."
      Rabl J., Leibundgut M., Ataide S.F., Haag A., Ban N.
      Science 331:730-736(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.93 ANGSTROMS).
    2. "The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A."
      Weisser M., Voigts-Hoffmann F., Rabl J., Leibundgut M., Ban N.
      Nat. Struct. Mol. Biol. 20:1015-1017(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.70 ANGSTROMS).

    Entry informationi

    Entry nameiE6PBR9_TETTH
    AccessioniPrimary (citable) accession number: E6PBR9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 20 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3