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E6PBR9 (E6PBR9_TETTH) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
40S ribosomal protein SA HAMAP-Rule MF_03015
OrganismTetrahymena thermophila EMBL DAA33965.1
Taxonomic identifier5911 [NCBI]
Taxonomic lineageEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

Protein attributes

Sequence length241 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits By similarity. HAMAP-Rule MF_03015

Subunit structure

Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (25S, 5.8S and 5S). Interacts with ribosomal protein S21 By similarity. HAMAP-Rule MF_03015

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_03015.

Sequence similarities

Belongs to the ribosomal protein S2P family. RuleBase RU003631 HAMAP-Rule MF_03015

Sequences

Sequence LengthMass (Da)Tools
E6PBR9 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: A9903E147B825EF6

FASTA24127,498
        10         20         30         40         50         60 
MATQRKQDDI KRLLASNCHQ ATINLNNQMK RYISHKGVNG IHYINIEETW QKIKLAARVI 

        70         80         90        100        110        120 
AAVQHPEDVM VVCSRIYGQR AAIKFAGYTH CKSTSSSRWT PGTLTNYQTL KYEEPRVLIV 

       130        140        150        160        170        180 
TDPRSDFQAI KEASYVNIPV IALCDSDSPL AYVDVVIPCN NRSTESISMI YWMIAREVKI 

       190        200        210        220        230        240 
LRGELSKDEE WEVMVDLFYH KTLPTAEQKE AEEEEGAEGA EEKVAEVKEG EAEQNTDNKN 


W 

« Hide

References

[1]"Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1."
Rabl J., Leibundgut M., Ataide S.F., Haag A., Ban N.
Science 331:730-736(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (3.93 ANGSTROMS).
[2]"Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1."
Rabl J., Leibundgut M., Ataide S.F., Haag A., Ban N.
Science 0:0-0(2011)
Cited for: NUCLEOTIDE SEQUENCE.
[3]"The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A."
Weisser M., Voigts-Hoffmann F., Rabl J., Leibundgut M., Ban N.
Nat. Struct. Mol. Biol. 20:1015-1017(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (3.70 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BK007908 mRNA. Translation: DAA33965.1.
RefSeqXP_001014441.2. XM_001014441.2.
UniGeneTth.3056.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2XZMX-ray3.93B1-241[»]
2XZNX-ray3.93B1-241[»]
4BPEX-ray3.70B1-241[»]
4BPNX-ray3.70B1-241[»]
4BPOX-ray3.70B1-241[»]
4BPPX-ray3.70B1-241[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7838059.
KEGGtet:TTHERM_00522630.

Family and domain databases

HAMAPMF_03015. Ribosomal_S2_euk.
InterProIPR001865. Ribosomal_S2.
IPR018130. Ribosomal_S2_CS.
IPR027498. Ribosomal_S2_euk.
IPR005707. Ribosomal_S2_euk/arc.
IPR023591. Ribosomal_S2_flav_dom.
[Graphical view]
PANTHERPTHR11489. PTHR11489. 1 hit.
PfamPF00318. Ribosomal_S2. 1 hit.
[Graphical view]
PRINTSPR00395. RIBOSOMALS2.
SUPFAMSSF52313. SSF52313. 1 hit.
TIGRFAMsTIGR01012. Sa_S2_E_A. 1 hit.
PROSITEPS00963. RIBOSOMAL_S2_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE6PBR9_TETTH
AccessionPrimary (citable) accession number: E6PBR9
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: March 19, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)