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E6PBR8

- E6PBR8_TETTH

UniProt

E6PBR8 - E6PBR8_TETTH

Protein

40S ribosomal protein S3a

Gene
N/A
Organism
Tetrahymena thermophila
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 13 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: UniProtKB-HAMAP

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinUniRule annotationSAAS annotationImported

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    40S ribosomal protein S3aUniRule annotation
    OrganismiTetrahymena thermophilaImported
    Taxonomic identifieri5911 [NCBI]
    Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytosolic small ribosomal subunit Source: UniProtKB-HAMAP

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedUniRule annotation

    Interactioni

    Subunit structurei

    Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (25S, 5.8S and 5S).UniRule annotation

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4BPEX-ray3.7041-265[»]
    4BPNX-ray3.7041-265[»]
    4BPOX-ray3.7041-265[»]
    4BPPX-ray3.7041-265[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S3Ae family.UniRule annotation

    Phylogenomic databases

    KOiK02984.

    Family and domain databases

    HAMAPiMF_03122. Ribosomal_S3Ae_euk.
    InterProiIPR027500. Ribosomal_S1/3_euk.
    IPR001593. Ribosomal_S3Ae.
    IPR018281. Ribosomal_S3Ae_CS.
    [Graphical view]
    PfamiPF01015. Ribosomal_S3Ae. 1 hit.
    [Graphical view]
    PROSITEiPS01191. RIBOSOMAL_S3AE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    E6PBR8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTQGKNPGLK AGGGKKGAKK RTIDPLSRKE WYDFRAPIPF SSKSFGKTLV    50
    TKSSGNRIAS EEIKGRVVES TLADLKDNSN DKAWRKVKLV IDEVDGRNAK 100
    TSFYGLDITR DRLCSMIRKW QTLIEARVDC KTNDGYIIRV FTLAFTKKTS 150
    AGKQSSTSTC YAKSSQVRAI RRKINTFITN EAAKLGIAEF SKNLIGEDYT 200
    KKIEKETKNI FPLQNITIRK VKVLKRPKLD ATKIAELYSH EKKGEKATGR 250
    DGAPEEQAAQ NLLAQ 265
    Length:265
    Mass (Da):29,653
    Last modified:March 8, 2011 - v1
    Checksum:i375678EF31073E14
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BK007907 mRNA. Translation: DAA33964.1.
    RefSeqiXP_001014743.2. XM_001014743.2.
    UniGeneiTth.3212.

    Genome annotation databases

    GeneIDi7833425.
    KEGGitet:TTHERM_00047480.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BK007907 mRNA. Translation: DAA33964.1 .
    RefSeqi XP_001014743.2. XM_001014743.2.
    UniGenei Tth.3212.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4BPE X-ray 3.70 4 1-265 [» ]
    4BPN X-ray 3.70 4 1-265 [» ]
    4BPO X-ray 3.70 4 1-265 [» ]
    4BPP X-ray 3.70 4 1-265 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 7833425.
    KEGGi tet:TTHERM_00047480.

    Phylogenomic databases

    KOi K02984.

    Family and domain databases

    HAMAPi MF_03122. Ribosomal_S3Ae_euk.
    InterProi IPR027500. Ribosomal_S1/3_euk.
    IPR001593. Ribosomal_S3Ae.
    IPR018281. Ribosomal_S3Ae_CS.
    [Graphical view ]
    Pfami PF01015. Ribosomal_S3Ae. 1 hit.
    [Graphical view ]
    PROSITEi PS01191. RIBOSOMAL_S3AE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1."
      Rabl J., Leibundgut M., Ataide S.F., Haag A., Ban N.
      Science 331:730-736(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
    2. "The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A."
      Weisser M., Voigts-Hoffmann F., Rabl J., Leibundgut M., Ban N.
      Nat. Struct. Mol. Biol. 20:1015-1017(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (3.70 ANGSTROMS).

    Entry informationi

    Entry nameiE6PBR8_TETTH
    AccessioniPrimary (citable) accession number: E6PBR8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 13 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3