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E6PBR8 (E6PBR8_TETTH) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
40S ribosomal protein S3a HAMAP-Rule MF_03122
OrganismTetrahymena thermophila EMBL DAA33964.1
Taxonomic identifier5911 [NCBI]
Taxonomic lineageEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

Protein attributes

Sequence length265 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Subunit structure

Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (25S, 5.8S and 5S) By similarity. HAMAP-Rule MF_03122

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_03122.

Sequence similarities

Belongs to the ribosomal protein S3Ae family. RuleBase RU000668 HAMAP-Rule MF_03122

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed By similarity HAMAP-Rule MF_03122

Sequences

Sequence LengthMass (Da)Tools
E6PBR8 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: 375678EF31073E14

FASTA26529,653
        10         20         30         40         50         60 
MTQGKNPGLK AGGGKKGAKK RTIDPLSRKE WYDFRAPIPF SSKSFGKTLV TKSSGNRIAS 

        70         80         90        100        110        120 
EEIKGRVVES TLADLKDNSN DKAWRKVKLV IDEVDGRNAK TSFYGLDITR DRLCSMIRKW 

       130        140        150        160        170        180 
QTLIEARVDC KTNDGYIIRV FTLAFTKKTS AGKQSSTSTC YAKSSQVRAI RRKINTFITN 

       190        200        210        220        230        240 
EAAKLGIAEF SKNLIGEDYT KKIEKETKNI FPLQNITIRK VKVLKRPKLD ATKIAELYSH 

       250        260 
EKKGEKATGR DGAPEEQAAQ NLLAQ 

« Hide

References

[1]"Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1."
Rabl J., Leibundgut M., Ataide S.F., Haag A., Ban N.
Science 331:730-736(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A."
Weisser M., Voigts-Hoffmann F., Rabl J., Leibundgut M., Ban N.
Nat. Struct. Mol. Biol. 20:1015-1017(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (3.70 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BK007907 mRNA. Translation: DAA33964.1.
RefSeqXP_001014743.2. XM_001014743.2.
UniGeneTth.3212.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4BPEX-ray3.7041-265[»]
4BPNX-ray3.7041-265[»]
4BPOX-ray3.7041-265[»]
4BPPX-ray3.7041-265[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7833425.
KEGGtet:TTHERM_00047480.

Phylogenomic databases

KOK02984.

Family and domain databases

HAMAPMF_03122. Ribosomal_S3Ae_euk.
InterProIPR027500. Ribosomal_S1/3_euk.
IPR001593. Ribosomal_S3Ae.
IPR018281. Ribosomal_S3Ae_CS.
[Graphical view]
PfamPF01015. Ribosomal_S3Ae. 1 hit.
[Graphical view]
PROSITEPS01191. RIBOSOMAL_S3AE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE6PBR8_TETTH
AccessionPrimary (citable) accession number: E6PBR8
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: July 9, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)