E6NI94 (E6NI94_HELPK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase, biosynthetic EMBL BAJ56497.1

Gene names

Name:	alr EMBL BAJ56497.1
Ordered Locus Names:	HPF30_0400

Organism

Helicobacter pylori (strain F30) [Complete proteome] [HAMAP] EMBL BAJ56497.1

Taxonomic identifier

866345 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter › Helicobacter pylori

Protein attributes

Sequence length	377 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS011079
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E6NI94 [UniParc]. Last modified March 8, 2011. Version 1. Checksum: F8508456CE40FC4C	FASTA	377	41,935
	10 20 30 40 50 60 MLKRASFVEV NTASLRHNFS TVKSIVPKDA HIMAVVKANA YGVGAIKASE IFLQEGANYL 70 80 90 100 110 120 GVATLDEALE LRSHFSKTPI LILGYSPNPN ASMLIDNDLS AMIFSLEQAE VFSQMALKSQ 130 140 150 160 170 180 KRLKIHLKID TGMHRLGLEP NFKSIEIIKK IRALKGLEIE GIFTHLSNAD SNIKTHAKNQ 190 200 210 220 230 240 MKAFNAFLEQ LLNQKIEFQY RHAYNSAGIL SLCNGNENRF LNLYRPGIML YGFYPSNGMK 250 260 270 280 290 300 ETCPTILKNV ISLKAQIVQI RSVKKGEFIG YGEHFYTNEE TLVGVLALGY ADGLMRALGN 310 320 330 340 350 360 RIQVAINNQL APLIGKVCMD QCFVKLNNIQ AKEGDEVILF GDKSAKANDA SEIAALLNTI 370 PYETISTLSK RLERVYI

References

[1]

"Birth and death of genes linked to chromosomal inversion." Furuta Y., Kawai M., Yahara K., Takahashi N., Handa N., Tsuru T., Oshima K., Yoshida M., Azuma T., Hattori M., Uchiyama I., Kobayashi I. Proc. Natl. Acad. Sci. U.S.A. 108:1501-1506(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: F30.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP011941 Genomic DNA. Translation: BAJ56497.1.
RefSeq	YP_005774145.1. NC_017365.1.
3D structure databases
ProteinModelPortal	E6NI94.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAJ56497; BAJ56497; HPF30_0400.
GeneID	12353759.
KEGG	hpf:HPF30_0400.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E6NI94_HELPK

Accession

Primary (citable) accession number: E6NI94

Entry history

Integrated into UniProtKB/TrEMBL:	March 8, 2011
Last sequence update:	March 8, 2011
Last modified:	May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)