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E5SXX1 (E5SXX1_TRISP) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:Tsp_09977 EMBL EFV50394.1
OrganismTrichinella spiralis (Trichina worm) [Complete proteome] EMBL EFV50394.1
Taxonomic identifier6334 [NCBI]
Taxonomic lineageEukaryotaMetazoaEcdysozoaNematodaEnopleaDorylaimiaTrichocephalidaTrichinellidaeTrichinella

Protein attributes

Sequence length1845 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EFV50394.1

Sequences

Sequence LengthMass (Da)Tools
E5SXX1 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: CE464A6F16D6FA8E

FASTA1,845207,016
        10         20         30         40         50         60 
MLNKCATQLI VKYCFIFERS KVMYKCVRNI FFLALYGLVW QLLLNTASAS NKAFVQPSVK 

        70         80         90        100        110        120 
NKFTKRKVWK LMKDPQLDKS VIHKEFRTND NNSPSVPMPD TRVRTEPIKQ HKMRCPIISG 

       130        140        150        160        170        180 
FTIREELKFS NIAAFNDSHS YTKGCTVGFR QLSDNVLEWN LKHMCSQYGH VSEVKVFFHP 

       190        200        210        220        230        240 
KTGVHLHLAR VVFDDQKSAE NCITHYNQRV HQGKRGRGFF DPDGRIINKL YEDALRELDQ 

       250        260        270        280        290        300 
AGLSSPRGVP PNAVDVMQMH SGLPSTSYGS DQSSHSYMKH EMPVVMADPR QQQTSVQNRS 

       310        320        330        340        350        360 
THQTGMYPPH SQPQPPPTPQ QQHSIGTPMP PPPSQVWASA PPPPPPPPSA TVPAAHPGTN 

       370        380        390        400        410        420 
YWQNTPPPPP SMMPPPPPPQ PPMMHMMGSA PSPITPSFFN VPPPPLPPLP PRPPPPASHF 

       430        440        450        460        470        480 
NYMQPPPGYD RNVSGSQSPY LSRTVGEKLG PPSSTAHPPA SGQQQQQQQQ QQQQQQQQQP 

       490        500        510        520        530        540 
MSQQQAVLQQ SRSSTSYTNN ERLSQRSSKD QNRSNTMSSS SCSGSTKYNV NGDERRSPRD 

       550        560        570        580        590        600 
PRDRSSYQRH HDRSSREVEK FSLPQQRHSS VEVASKGGSS ASSTPSSVVS KIAPVTGDNV 

       610        620        630        640        650        660 
SEDDHDVERK ESPESGESNN TVAVLEAKQV VAEMAVHSWR LVKYRRTPTK CSHGNMLPRK 

       670        680        690        700        710        720 
SDKSTTVCVY CENEMEANRH VDLSGDHFQL HSEEKEEDVD NVKEMNLMKS PDTVAAEVSS 

       730        740        750        760        770        780 
PCEKMDTLKR PKIGDNVIQS TDHNDTLTVT SAVSVDSDPV VTTVTSTITT PVATTSSTPT 

       790        800        810        820        830        840 
ASSDVDEFKI RSITDLDSFT MGDNVEERFK RKRGFSDVFA GVKEKPKSVN LLPTKPKPRT 

       850        860        870        880        890        900 
VASPPPAETE PVRNASPPPA KIKPVVSVAA QSSDAQSPSP PVSKDDSSSA PTTPKQDDDP 

       910        920        930        940        950        960 
VDERVLEEFC QDMFQTLRKD LTQKLLHSVA FVAFDNWWTK MEEQKHGSGG QWSVKKSEKE 

       970        980        990       1000       1010       1020 
YERPKKIIRR ISSPPPEEQQ PFVLPKFKRK SAPSDKQEQK STHEKGKTDK LSPVDRLTKR 

      1030       1040       1050       1060       1070       1080 
RAEKRAIERE SEEEDDLEPE EEQLGKEAKQ QRVSDDDNDD DDDDDDDDDD DNIVDGDEDE 

      1090       1100       1110       1120       1130       1140 
DALMGNSDFS ASVLFGLGAG VEEQRRTPPG RAEKELNRKN KSSKRKQKNK KRGGNQNSRR 

      1150       1160       1170       1180       1190       1200 
RRTRSSSPDS DDNFSLTSAD SGDDDDTSSF SENWSSSSSS SSSSSSSSDE DSDNPPTPHP 

      1210       1220       1230       1240       1250       1260 
TRKADGSDYD EEDHSDDDTE EEEEEEDGFE LQSDEGRSSS NGRRIAKRRR ASTRNKRHLQ 

      1270       1280       1290       1300       1310       1320 
NGNVEKDLNF NDDNNNNNNN EDEEEEDDDD GDDEDDDFDS ADSRKGSFGG SRSARSQNNR 

      1330       1340       1350       1360       1370       1380 
KHASSNRKSK RGKRSSSVVV INLDEEDFRT SSDHAAEVSD QERALMTMPY TTCHDHPYLP 

      1390       1400       1410       1420       1430       1440 
KANKLKHQQE LASSLAAVVA VEKGKQKQKQ KQKKQKKRRE KSELSELEEE EDNDDELLVE 

      1450       1460       1470       1480       1490       1500 
REQIEGEGEG EEEEEEEYED EEEDMDVDVE VEEERVRRKK RREDRENGDG EEGRAADDEK 

      1510       1520       1530       1540       1550       1560 
RKRKKEKQRR RGRQRKISAT NDDDDDDSIM LLTKQEAKQL SGDELEELEN VVVGSEGKAK 

      1570       1580       1590       1600       1610       1620 
CKISSVDSLC PKSAPVFKKR DTWSERKILY NLIEPALDEE EVNALRDVFM ELIRGKEMNA 

      1630       1640       1650       1660       1670       1680 
ATFSLVHWST GDYMPYRVLV VNRSSGRGGC NRGSCISSQS AVNSNNNRRS GENPTGSVRT 

      1690       1700       1710       1720       1730       1740 
EGYCKLSQKE KMSRRAGRRA GAIRRRNLGS AVSPFGLAER AQNGGKTPER GDLLLNLPQH 

      1750       1760       1770       1780       1790       1800 
ANESNKSLEL RAHARSFQRR VLSSFGSDVE SDLLKYNQLK IHGFGLFAME DIGPDEMIIE 

      1810       1820       1830       1840 
YVGQKIRLTV AEKRELHTCS ALTTIRWSTP QNTATRPGLL TTAAR 

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References

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
ABIR02001952 Genomic DNA. Translation: EFV50394.1.
RefSeqXP_003370766.1. XM_003370718.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaEFV50394; EFV50394; EFV50394.
GeneID10908078.
KEGGtsp:Tsp_09977.

Organism-specific databases

CTD10908078.

Phylogenomic databases

KOK11422.
OMAENEMEAN.

Family and domain databases

Gene3D3.30.70.330. 1 hit.
InterProIPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
[Graphical view]
PfamPF00076. RRM_1. 1 hit.
[Graphical view]
SMARTSM00360. RRM. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE5SXX1_TRISP
AccessionPrimary (citable) accession number: E5SXX1
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: March 19, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)