Skip Header

Contribute Send feedback
Read comments (?) or add your own

E5SXJ9 (E5SXJ9_TRISP) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Glycerol-3-phosphate dehydrogenase [NAD(P)+ ] [NAD+], cytoplasmic EMBL EFV50507.1
Gene names
ORF Names:Tsp_09858 EMBL EFV50507.1
OrganismTrichinella spiralis (Trichina worm) [Complete proteome] EMBL EFV50507.1
Taxonomic identifier6334 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Ecdysozoa › Nematoda › Enoplea › Trichocephalida › Trichinellidae › Trichinella

Protein attributes

Sequence length256 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. RuleBase RU000437

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EFV50507.1

Sequences

Sequence LengthMass (Da)Tools
E5SXJ9 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: BAE83D95BFE42E1F

FASTA25628,026
        10         20         30         40         50         60 
MAVPQQFLAK TCENIVGKIK PTAIAVTTIK GIEVDEKGKM CVSSVIIQKI LNIPVAALNG 

        70         80         90        100        110        120 
ANIAPEVAEK HFCEATIGVQ REQDGQLLKQ VFNIPTFHVN VVRDLQTVEY CGALKNVVAC 

       130        140        150        160        170        180 
AAGLVDGLKF GTNTKSAVIR IGFLEMINFI KQFVGEPSMD TFHESCGIAD LIATCFSGRN 

       190        200        210        220        230        240 
RKVCEAFVNG GRTIEELEKE LLGGQKLQGP YTAAQIYVAL ERRGLVDKYP LITTVHKICS 

       250 
QQWEPKMLIE VLCSQK

« Hide

References

[1]"The draft genome of the parasitic nematode Trichinella spiralis."
Mitreva M., Jasmer D.P., Zarlenga D.S., Wang Z., Abubucker S., Martin J., Taylor C.M., Yin Y., Fulton L., Minx P., Yang S.P., Warren W.C., Fulton R.S., Bhonagiri V., Zhang X., Hallsworth-Pepin K., Clifton S.W., McCarter J.P. expand/collapse author list , Appleton J., Mardis E.R., Wilson R.K.
Nat. Genet. 43:228-235(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ISS 195 EMBL EFV50507.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		ABIR02001940 Genomic DNA. Translation: EFV50507.1.
RefSeqXP_003370644.1. XM_003370596.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaEFV50507; EFV50507; EFV50507.
GeneID10907875.
KEGGtsp:Tsp_09858.

Organism-specific databases

CTD10907875.

Phylogenomic databases

KOK00006.
OMAHRICTEQ.

Family and domain databases

Gene3D1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
InterProIPR008927. 6-PGluconate_DH_C-like.
IPR013328. DH_multihelical.
IPR006168. G3P_DH_NAD-dep.
IPR006109. G3P_DH_NAD-dep_C.
IPR017751. G3P_DH_NAD-dep_euk.
IPR011128. G3P_DH_NAD-dep_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERPTHR11728. PTHR11728. 1 hit.
PfamPF07479. NAD_Gly3P_dh_C. 1 hit.
PF01210. NAD_Gly3P_dh_N. 1 hit.
[Graphical view]
PRINTSPR00077. GPDHDRGNASE.
SUPFAMSSF48179. 6DGDH_C_like. 1 hit.
TIGRFAMsTIGR03376. glycerol3P_DH. 1 hit.
PROSITEPS00957. NAD_G3PDH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE5SXJ9_TRISP
AccessionPrimary (citable) accession number: E5SXJ9
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: April 3, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info