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Protein
Submitted name:

Putative SET domain protein

Gene

Tsp_09848

Organism
Trichinella spiralis (Trichina worm)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. histone-lysine N-methyltransferase activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative SET domain proteinImported
Gene namesi
ORF Names:Tsp_09848Imported
OrganismiTrichinella spiralis (Trichina worm)Imported
Taxonomic identifieri6334 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaEnopleaDorylaimiaTrichocephalidaTrichinellidaeTrichinella
ProteomesiUP000006823 Componenti: Unassembled WGS sequence

Family & Domainsi

Sequence similaritiesi

Contains 1 SET domain.UniRule annotation

Phylogenomic databases

InParanoidiE5SXI9.
KOiK11428.

Family and domain databases

InterProiIPR016858. Hist_H4-K20_MeTrfase.
IPR001214. SET_dom.
[Graphical view]
PANTHERiPTHR22884:SF11. PTHR22884:SF11. 1 hit.
PfamiPF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00317. SET. 1 hit.
[Graphical view]
PROSITEiPS51571. SAM_MT43_PR_SET. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E5SXI9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSSGLKAFF KTQKVAAIDD ADSKKVYEIS IGKLAVEQKT DDPNCDNVKR
60 70 80 90 100
EKSSKVKIKS GKSKVNNNQK LSSVQISTTC NRAAVESTEQ RDLVEVDKQL
110 120 130 140 150
ARKNAREASS IKTTVGKKEP RQLEKKTVSA NKRVVVQSGS LPILLSTDHH
160 170 180 190 200
DIDHNKNDPL KNSTFPNGVP VVEAVGEVKI ENGENLLRTS TKVGNSKKNS
210 220 230 240 250
TKKKNSCNSR QITEFFTVRK SGRKTASELQ EEKFDKLKKA ILSVCQDGLE
260 270 280 290 300
VCEFPVKGRG VIATKKFYRD DFVVEYRGEL IDSTEAQRRE RDYQNSSQVG
310 320 330 340 350
CYMYYFSYKG KRYCVDATPE SSHYGRLLNH SAKDPNVKSK IVNIDDNPRI
360 370 380
IFVAKRDVEI GEELLYDYGD RRKDAIRAHP WLVCS
Length:385
Mass (Da):43,386
Last modified:March 7, 2011 - v1
Checksum:i94ED87F313E564A1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ABIR02001940 Genomic DNA. Translation: EFV50497.1.
RefSeqiXP_003370634.1. XM_003370586.1.

Genome annotation databases

EnsemblMetazoaiEFV50497; EFV50497; EFV50497.
GeneIDi10907865.
KEGGitsp:Tsp_09848.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ABIR02001940 Genomic DNA. Translation: EFV50497.1.
RefSeqiXP_003370634.1. XM_003370586.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiEFV50497; EFV50497; EFV50497.
GeneIDi10907865.
KEGGitsp:Tsp_09848.

Organism-specific databases

CTDi10907865.

Phylogenomic databases

InParanoidiE5SXI9.
KOiK11428.

Family and domain databases

InterProiIPR016858. Hist_H4-K20_MeTrfase.
IPR001214. SET_dom.
[Graphical view]
PANTHERiPTHR22884:SF11. PTHR22884:SF11. 1 hit.
PfamiPF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00317. SET. 1 hit.
[Graphical view]
PROSITEiPS51571. SAM_MT43_PR_SET. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ISS 195Imported.

Entry informationi

Entry nameiE5SXI9_TRISP
AccessioniPrimary (citable) accession number: E5SXI9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 7, 2011
Last sequence update: March 7, 2011
Last modified: March 31, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.