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Protein
Submitted name:

Putative SNF2 family N-domain protein

Gene

Tsp_11538

Organism
Trichinella spiralis (Trichina worm)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Putative SNF2 family N-domain proteinImported
Gene namesi
ORF Names:Tsp_11538Imported
OrganismiTrichinella spiralis (Trichina worm)Imported
Taxonomic identifieri6334 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaEnopleaDorylaimiaTrichocephalidaTrichinellidaeTrichinella
Proteomesi
  • UP000006823 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini240 – 405Helicase ATP-bindingInterPro annotationAdd BLAST166
Domaini1271 – 1421Helicase C-terminalInterPro annotationAdd BLAST151

Phylogenomic databases

eggNOGiKOG0388. Eukaryota.
KOG0391. Eukaryota.
COG0553. LUCA.
InParanoidiE5SPU4.
KOiK11661.
OrthoDBiEOG091G045T.

Family and domain databases

CDDicd00079. HELICc. 1 hit.
InterProiView protein in InterPro
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR000330. SNF2_N.
PfamiView protein in Pfam
PF00271. Helicase_C. 1 hit.
PF00176. SNF2_N. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SUPFAMiSSF52540. SSF52540. 4 hits.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.

Sequencei

Sequence statusi: Complete.

E5SPU4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLVNNNNIII VVDVADMGGI SSSASSDKES NDSDVDDDAD SVENTTEVVG
60 70 80 90 100
VPETSSWTEV MFLSSSERMM NSSRIFTNNA ALKLSTETKE NSISKPRVGK
110 120 130 140 150
VKTLLEEQSE LDGNKAAGES NAAGNIYDTD RNVSTSSKKQ VEEEKAESST
160 170 180 190 200
SPFTADEEET VTELDDYTQS NETSSWINYQ KLQSENVEER REGLAHIAEE
210 220 230 240 250
VERLQPKGYT LETTTVNTRI PFLLKFSLRE YQHVGLDWLV MLDSRGLNGI
260 270 280 290 300
LADEMGLGKT IQTIALLAHH ACQNNIWGPH LIIVPTTVIL NWEMEFKKWC
310 320 330 340 350
PAFKIFTYYG STKERKEKRK GWNRPNAFHV CITSYKLVIR DYSTFRRKAW
360 370 380 390 400
QYMILDEAQH IKNYKSERWQ MLLHFRARRR LLLTGTPLQN SVMELWSLMH
410 420 430 440 450
FLMPDIFCSD KDFREWFSNP LTGMVEGTME FNDQVIKRLH HVLRPFLLRR
460 470 480 490 500
LKSEVETQLP KKYEHLIKCS LSKRQRYLYD EFMSRSNTKA QLATGSIFNI
510 520 530 540 550
ISVLMQLRKV CNHPNLFEQR PVMSPLVLDP IIYRPPSLVC DLPSKCNLEI
560 570 580 590 600
LPLRLNVLQQ EFSSGFACNC SGKLFSTKFE QPCKIESLPQ ISELPVGLFN
610 620 630 640 650
FKSLFLDNRN TTALLDNSRA VVKENSNMKD SSDQKLTAVI PLKKRCSTSN
660 670 680 690 700
GVVVSRPASV DVSPKGAGSS VKSEEKPKVI YWRLNPIGGV NASGGRVGTT
710 720 730 740 750
RVLRPIYTAT TSRMPRPALA SRGPCAAGPS LVRLVRPSFG AVATRAPAVA
760 770 780 790 800
ATPAASQQCR SPATVQSYHG GALRPRLGTT SRPPMACRQS FLQQMVRPNG
810 820 830 840 850
GSPTKPLSAR AFLDYRLQTA GAVEASGRTT TGMIHVRLPG SNPTSFSGQS
860 870 880 890 900
SALSTASSLR VGAGAKVNIR CSVPNQNILM PRGALIQLHA GKLCIPIRPV
910 920 930 940 950
PPPASTASNS SSSGTAVVEN VQLKKTPMAA LPSSTTYERG RRKQQQQLQP
960 970 980 990 1000
QPQQRQQPTG QQRQISSEES PAFLSPVENC NRRVTRRRKA TSQVESSSFA
1010 1020 1030 1040 1050
DSPDDDFNVA AESKKIALRS GATVGSGSKR RRSAAVVAST SSRSDSSKLR
1060 1070 1080 1090 1100
RSTRSSFKAA VEKNSNIFAP STHSDDHHYN NEDEGEELPS RSGDVERMDG
1110 1120 1130 1140 1150
TSTQGTVSFD PEAETSLEKA ILKLLNKQVN DLWSEITLSK AETKLRIQNN
1160 1170 1180 1190 1200
LINQNRERCL ARPMYGSDLR MAFTIEKRSV PLSRTLEDIF QSVRFLLQQF
1210 1220 1230 1240 1250
LVYVPAALIS EPLFRPTYRS CAVEYAEVAM RTSMNRLLKN KLDVFRAVEY
1260 1270 1280 1290 1300
AQRLCFPELR LIEYDCGKLQ SLSALLRRLQ AEGHRCLIFT QMARMLDILE
1310 1320 1330 1340 1350
AFLSYHGYMY LRLDGATNIE RRQMLMERFN HDKKILCFIL STRSGGVGVN
1360 1370 1380 1390 1400
LTGADTVIFY DSDWNPTMDA QAQDRCHRIG QTRDVHIYRL ICERTIEENI
1410 1420 1430 1440 1450
LLKATQKRKL GELAIDEGGF KADFFHNTNI KELFDMEESV FVRDVSDADI
1460 1470 1480 1490 1500
QQAMSKVEDD NDAIAARIAV DEAQAEERAD EEEDDENATS GQKKSDAVQN
1510 1520 1530 1540 1550
ANDNSVAESS DPDVLRVLEE MKDVLSKMSE VERYALEYIE EERAFEFSEE
1560 1570 1580 1590 1600
LKGVDNEIEE RKMALMQAHY SEMRSARAMQ EAEAGEEFAI TYDRRDAFAK
1610 1620 1630 1640 1650
VRDGDFNGES VKNSGKVSLL LTKEEGVTSV VAKSSTSSSV PATKCSLSNE
1660
KFPIRTRRTR NNNSTVD
Length:1,667
Mass (Da):186,800
Last modified:March 8, 2011 - v1
Checksum:iD1B4251852E1178A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ABIR02001442 Genomic DNA. Translation: EFV53166.1.
RefSeqiXP_003373126.1. XM_003373078.1.

Genome annotation databases

EnsemblMetazoaiEFV53166; EFV53166; EFV53166.
GeneIDi10902037.
KEGGitsp:Tsp_11538.

Similar proteinsi

Entry informationi

Entry nameiE5SPU4_TRISP
AccessioniPrimary (citable) accession number: E5SPU4
Entry historyiIntegrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: October 25, 2017
This is version 31 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported