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E5SMQ4

- E5SMQ4_TRISP

UniProt

E5SMQ4 - E5SMQ4_TRISP

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Protein
Submitted name:

Histone deacetylase 2

Gene

Tsp_08614

Organism
Trichinella spiralis (Trichina worm)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. hydrolase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Histone deacetylase 2Imported
Gene namesi
ORF Names:Tsp_08614Imported
OrganismiTrichinella spiralis (Trichina worm)Imported
Taxonomic identifieri6334 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaEnopleaDorylaimiaTrichocephalidaTrichinellidaeTrichinella
ProteomesiUP000006823: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliE5SMQ4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiE5SMQ4.
KOiK11418.
OMAiDIIVYNA.

Family and domain databases

Gene3Di3.40.800.20. 1 hit.
InterProiIPR000286. His_deacetylse.
IPR023801. His_deacetylse_dom.
[Graphical view]
PANTHERiPTHR10625. PTHR10625. 1 hit.
PfamiPF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PRINTSiPR01270. HDASUPER.

Sequencei

Sequence statusi: Complete.

E5SMQ4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDITEKDFER INSSKLYAPL KEQGLHSFVF DPIYDIRFFG IEKLHPFDAG
60 70 80 90 100
KWGRVYNKLV KRGYINEQHI CRPREAQYDD LLIVHSKSYL STLHWNVLIA
110 120 130 140 150
RIMEVPLLIF FPACVIDRKV LKSFRYQTGG TVLAVRLAIE CGAAVNLGGG
160 170 180 190 200
FHHCSSKSGG GFCPYADITL AIKFLFAQRL VEKVMIVDLD AHQGNGHERD
210 220 230 240 250
FLTSTDNVYI LDMYNCDIYP RDVKAKKAIR KAVEIKSQTS DQRYFSLLKK
260 270 280 290 300
ALDEAVLEFQ PQLVLYNAGT DSLTNDPLGN LDLSPTAILQ RDELIFKTFR
310 320 330 340 350
KSNPAVPIAM VFSGGYQRNS AEFSNSQDKL KKQAKLRRTG NQVTSIPPMR

NSPSSAVII
Length:359
Mass (Da):40,620
Last modified:March 8, 2011 - v1
Checksum:i8FD20FF894F28137
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ABIR02001301 Genomic DNA. Translation: EFV53946.1.
RefSeqiXP_003373888.1. XM_003373840.1.

Genome annotation databases

EnsemblMetazoaiEFV53946; EFV53946; EFV53946.
GeneIDi10907049.
KEGGitsp:Tsp_08614.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ABIR02001301 Genomic DNA. Translation: EFV53946.1 .
RefSeqi XP_003373888.1. XM_003373840.1.

3D structure databases

ProteinModelPortali E5SMQ4.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai EFV53946 ; EFV53946 ; EFV53946 .
GeneIDi 10907049.
KEGGi tsp:Tsp_08614.

Organism-specific databases

CTDi 10907049.

Phylogenomic databases

InParanoidi E5SMQ4.
KOi K11418.
OMAi DIIVYNA.

Family and domain databases

Gene3Di 3.40.800.20. 1 hit.
InterProi IPR000286. His_deacetylse.
IPR023801. His_deacetylse_dom.
[Graphical view ]
PANTHERi PTHR10625. PTHR10625. 1 hit.
Pfami PF00850. Hist_deacetyl. 1 hit.
[Graphical view ]
PRINTSi PR01270. HDASUPER.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ISS 195Imported.

Entry informationi

Entry nameiE5SMQ4_TRISP
AccessioniPrimary (citable) accession number: E5SMQ4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: October 29, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3