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E5SMQ4

- E5SMQ4_TRISP

UniProt

E5SMQ4 - E5SMQ4_TRISP

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Protein
Submitted name: Histone deacetylase 2
Gene
Tsp_08614
Organism
Trichinella spiralis (Trichina worm)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. hydrolase activity Source: UniProtKB-KW
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Keywords - Molecular functioni

    HydrolaseSAAS annotations

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Histone deacetylase 2Imported
    Gene namesi
    ORF Names:Tsp_08614Imported
    OrganismiTrichinella spiralis (Trichina worm)Imported
    Taxonomic identifieri6334 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaEnopleaDorylaimiaTrichocephalidaTrichinellidaeTrichinella
    ProteomesiUP000006823: Unassembled WGS sequence

    Structurei

    3D structure databases

    ProteinModelPortaliE5SMQ4.

    Family & Domainsi

    Phylogenomic databases

    KOiK11418.
    OMAiDIIVYNA.

    Family and domain databases

    Gene3Di3.40.800.20. 1 hit.
    InterProiIPR000286. His_deacetylse.
    IPR023801. His_deacetylse_dom.
    [Graphical view]
    PANTHERiPTHR10625. PTHR10625. 1 hit.
    PfamiPF00850. Hist_deacetyl. 1 hit.
    [Graphical view]
    PRINTSiPR01270. HDASUPER.

    Sequencei

    Sequence statusi: Complete.

    E5SMQ4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDITEKDFER INSSKLYAPL KEQGLHSFVF DPIYDIRFFG IEKLHPFDAG    50
    KWGRVYNKLV KRGYINEQHI CRPREAQYDD LLIVHSKSYL STLHWNVLIA 100
    RIMEVPLLIF FPACVIDRKV LKSFRYQTGG TVLAVRLAIE CGAAVNLGGG 150
    FHHCSSKSGG GFCPYADITL AIKFLFAQRL VEKVMIVDLD AHQGNGHERD 200
    FLTSTDNVYI LDMYNCDIYP RDVKAKKAIR KAVEIKSQTS DQRYFSLLKK 250
    ALDEAVLEFQ PQLVLYNAGT DSLTNDPLGN LDLSPTAILQ RDELIFKTFR 300
    KSNPAVPIAM VFSGGYQRNS AEFSNSQDKL KKQAKLRRTG NQVTSIPPMR 350
    NSPSSAVII 359
    Length:359
    Mass (Da):40,620
    Last modified:March 8, 2011 - v1
    Checksum:i8FD20FF894F28137
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    ABIR02001301 Genomic DNA. Translation: EFV53946.1.
    RefSeqiXP_003373888.1. XM_003373840.1.

    Genome annotation databases

    EnsemblMetazoaiEFV53946; EFV53946; EFV53946.
    GeneIDi10907049.
    KEGGitsp:Tsp_08614.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    ABIR02001301 Genomic DNA. Translation: EFV53946.1 .
    RefSeqi XP_003373888.1. XM_003373840.1.

    3D structure databases

    ProteinModelPortali E5SMQ4.
    ModBasei Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai EFV53946 ; EFV53946 ; EFV53946 .
    GeneIDi 10907049.
    KEGGi tsp:Tsp_08614.

    Organism-specific databases

    CTDi 10907049.

    Phylogenomic databases

    KOi K11418.
    OMAi DIIVYNA.

    Family and domain databases

    Gene3Di 3.40.800.20. 1 hit.
    InterProi IPR000286. His_deacetylse.
    IPR023801. His_deacetylse_dom.
    [Graphical view ]
    PANTHERi PTHR10625. PTHR10625. 1 hit.
    Pfami PF00850. Hist_deacetyl. 1 hit.
    [Graphical view ]
    PRINTSi PR01270. HDASUPER.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ISS 195Imported.

    Entry informationi

    Entry nameiE5SMQ4_TRISP
    AccessioniPrimary (citable) accession number: E5SMQ4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: May 14, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

    Keywords - Technical termi

    Complete proteome

    External Data

    Dasty 3

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