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Protein
Submitted name:

Putative SET domain protein

Gene

Tsp_01566

Organism
Trichinella spiralis (Trichina worm)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Putative SET domain proteinImported
Gene namesi
ORF Names:Tsp_01566Imported
OrganismiTrichinella spiralis (Trichina worm)Imported
Taxonomic identifieri6334 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaEnopleaDorylaimiaTrichocephalidaTrichinellidaeTrichinella
Proteomesi
  • UP000006823 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini390 – 502CXCInterPro annotationAdd BLAST113
Domaini504 – 619SETInterPro annotationAdd BLAST116

Phylogenomic databases

eggNOGiKOG1079. Eukaryota.
COG2940. LUCA.
InParanoidiE5SCV7.
KOiK11430.
OrthoDBiEOG091G09L0.

Family and domain databases

InterProiView protein in InterPro
IPR026489. CXC_dom.
IPR001214. SET_dom.
PfamiView protein in Pfam
PF00856. SET. 1 hit.
SMARTiView protein in SMART
SM00317. SET. 1 hit.
PROSITEiView protein in PROSITE
PS51633. CXC. 1 hit.
PS50280. SET. 1 hit.

Sequencei

Sequence statusi: Complete.

E5SCV7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDILYSRKRL VGRTRVEKSA EGTPTLEETK MMMDIYDEIM KDYKQPVSKV
60 70 80 90 100
KVNDSYLSNY EALVQDLWRD SQRMPYPNED RVSVVDVDTV SCFNEKSENP
110 120 130 140 150
SNSYNLFVMK IDEKTNSHTK NWMMIPKNFL GRPCYDLRTL RDDQQENNDH
160 170 180 190 200
RFLPDFAFYK LVLKASEVFY NQNITDQWSG ELILPNDRLF TIIHHLFPHK
210 220 230 240 250
LSANNLKELF IHIFCMLNEK KGNNKLQHLN DRESIFVKAF CPICFQFCCT
260 270 280 290 300
THGESLVDPM YVHNYNPKLN KKSKVKDPCG KFCYLKSLDK NTVRVLRHNS
310 320 330 340 350
SKSKASKVKL EWTAEKEEML RALESLFGSN SCIIAECLNT PYCSEVYARI
360 370 380 390 400
VKSESVASTS WKIEEEKWKM PEIPQKMVKS EAYSTRSCVN NKVLLYSSGS
410 420 430 440 450
SDTDSDWDSD GEGMEAYKPC YCRGRCRDNA NCSCNEREYC EKYCRCSDNC
460 470 480 490 500
SKKYLGCNCK GVCHRKVCLC MKNNRECDPT LCKNCGGNQL LICKNDFMQN
510 520 530 540 550
GIRRRLYVCE SNVHGLGLFT TEDIAAGDFI CEYRGEILTK AEAQRRGKIY
560 570 580 590 600
DSRGMSFLFM LNTDFDLDAT RFGSVARFIN HSKIPNCVPQ VKMVLGSHRI
610 620 630
AFYATRNIEA NEELFFNYGV LPECVKLLLE RLS
Length:633
Mass (Da):73,325
Last modified:March 8, 2011 - v1
Checksum:i097881E351BC2589
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ABIR02000824 Genomic DNA. Translation: EFV57371.1.
RefSeqiXP_003377384.1. XM_003377336.1.

Genome annotation databases

EnsemblMetazoaiEFV57371; EFV57371; EFV57371.
GeneIDi10911633.
KEGGitsp:Tsp_01566.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiE5SCV7_TRISP
AccessioniPrimary (citable) accession number: E5SCV7
Entry historyiIntegrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: July 5, 2017
This is version 27 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported