E5SCV7 (E5SCV7_TRISP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative SET domain protein EMBL EFV57371.1

Gene names

ORF Names:

Tsp_01566 EMBL EFV57371.1

Organism

Trichinella spiralis (Trichina worm) [Complete proteome] EMBL EFV57371.1

Taxonomic identifier

6334 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Nematoda › Enoplea › Enoplia › Trichocephalida › Trichinellidae › Trichinella

Protein attributes

Sequence length	633 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities	Contains 1 SET domain. SAAS SAAS001214 RuleBase RU004538
Caution	The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EFV57371.1

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	E5SCV7 [UniParc]. Last modified March 8, 2011. Version 1. Checksum: 097881E351BC2589	FASTA	633	73,325
	10 20 30 40 50 60 MDILYSRKRL VGRTRVEKSA EGTPTLEETK MMMDIYDEIM KDYKQPVSKV KVNDSYLSNY 70 80 90 100 110 120 EALVQDLWRD SQRMPYPNED RVSVVDVDTV SCFNEKSENP SNSYNLFVMK IDEKTNSHTK 130 140 150 160 170 180 NWMMIPKNFL GRPCYDLRTL RDDQQENNDH RFLPDFAFYK LVLKASEVFY NQNITDQWSG 190 200 210 220 230 240 ELILPNDRLF TIIHHLFPHK LSANNLKELF IHIFCMLNEK KGNNKLQHLN DRESIFVKAF 250 260 270 280 290 300 CPICFQFCCT THGESLVDPM YVHNYNPKLN KKSKVKDPCG KFCYLKSLDK NTVRVLRHNS 310 320 330 340 350 360 SKSKASKVKL EWTAEKEEML RALESLFGSN SCIIAECLNT PYCSEVYARI VKSESVASTS 370 380 390 400 410 420 WKIEEEKWKM PEIPQKMVKS EAYSTRSCVN NKVLLYSSGS SDTDSDWDSD GEGMEAYKPC 430 440 450 460 470 480 YCRGRCRDNA NCSCNEREYC EKYCRCSDNC SKKYLGCNCK GVCHRKVCLC MKNNRECDPT 490 500 510 520 530 540 LCKNCGGNQL LICKNDFMQN GIRRRLYVCE SNVHGLGLFT TEDIAAGDFI CEYRGEILTK 550 560 570 580 590 600 AEAQRRGKIY DSRGMSFLFM LNTDFDLDAT RFGSVARFIN HSKIPNCVPQ VKMVLGSHRI 610 620 630 AFYATRNIEA NEELFFNYGV LPECVKLLLE RLS

References

[1]

"The draft genome of the parasitic nematode Trichinella spiralis." Mitreva M., Jasmer D.P., Zarlenga D.S., Wang Z., Abubucker S., Martin J., Taylor C.M., Yin Y., Fulton L., Minx P., Yang S.P., Warren W.C., Fulton R.S., Bhonagiri V., Zhang X., Hallsworth-Pepin K., Clifton S.W., McCarter J.P. , Appleton J., Mardis E.R., Wilson R.K. Nat. Genet. 43:228-235(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ISS 195 EMBL EFV57371.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	ABIR02000824 Genomic DNA. Translation: EFV57371.1.
RefSeq	XP_003377384.1. XM_003377336.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	EFV57371; EFV57371; EFV57371.
GeneID	10911633.
KEGG	tsp:Tsp_01566.
Organism-specific databases
CTD	10911633.
Phylogenomic databases
KO	K11430.
Family and domain databases
InterPro	IPR026489. CXC_dom. IPR001214. SET_dom. [Graphical view]
Pfam	PF00856. SET. 1 hit. [Graphical view]
SMART	SM00317. SET. 1 hit. [Graphical view]
PROSITE	PS51633. CXC. 1 hit. PS50280. SET. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E5SCV7_TRISP

Accession

Primary (citable) accession number: E5SCV7

Entry history

Integrated into UniProtKB/TrEMBL:	March 8, 2011
Last sequence update:	March 8, 2011
Last modified:	April 3, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)