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E5SA29

- E5SA29_TRISP

UniProt

E5SA29 - E5SA29_TRISP

Protein

Alpha-amylase

Gene

Tsp_00603

Organism
Trichinella spiralis (Trichina worm)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotationSAAS annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    ORF Names:Tsp_00603Imported
    OrganismiTrichinella spiralis (Trichina worm)Imported
    Taxonomic identifieri6334 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaEnopleaDorylaimiaTrichocephalidaTrichinellidaeTrichinella
    ProteomesiUP000006823: Unassembled WGS sequence

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    KOiK01176.
    OMAiGRCGFIN.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    E5SA29-1 [UniParc]FASTAAdd to Basket

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    MLKKRIAVEA SIIPQIYDEE ATVVSAEPSA SGQFSFFREV RNEYSPLGPM    50
    VKWTPTMQRR ANIKPTVVRE TSSACERKGR VSTVRLCLHC SKIKLALKIK 100
    KANYTLKQWF SKCGLRSTGG SSADSGHTGK DIKKKQLVNQ DVCLDQILVL 150
    FFAYSMQKHF TRLIAWLLLV VHWQVVIGDG DKVSDDCFDE LQTDPRRPVA 200
    VHLFEWKWTD IANECETFLK DTGIGLIQVS PPNEHAVFEH KGDYSWWLRY 250
    QPVSYLLHSR SGTEKEFIDM VQRCMKVGIK ILVDGVINHM VGANMKGCGS 300
    GGSSYNSTPF KESFPAVPYG PSDFNDNICN HDIKNYDNAA EVRNCRLVSL 350
    VDLKLSKVEV QQKIADYLNH LIDIGVAGFR IDAAKHMWPD DIRNILKRVN 400
    HLNPAYYPKD KCAFVFHEVI DQGAEAIQGS EYVDFGRITN FRYGLDLSAA 450
    VMRNENFLYF KNFGPEWNYW KSHDVLVFVD NHDNQRGSGG GGKVLTYKTP 500
    KMYKLAVSFM LAWNYGIPRL MSSYYFNGHD MGPPSFGRPD FKTKSPTFTP 550
    DGLCNQSSGW VCEHRWHEIK RMTLFSASVA GLPNTNIISD HHRIAFSRGS 600
    NGFYALNNDP HNAWVVQVQT SLPAGFYCDF MTGSVTNKGC SGKTIEVTTD 650
    GKVKLVVEPE TAVAISVASK LTLPPSYKRT VVLIHFPTIE GQNVFIRGGV 700
    HSSHRKGCKT DVIDTPCSIP IIHIEDVQSS WKKFIHWRSD DYFLDWSTGD 750
    NAEGSSTIGT PLAWSTNIKN QVGYQWENKY GEHYWFMNVL MDCNRTESGW 800
    FEFQSAMDSS NLVESAIKQT KCNGDGGVAE PPFTTTFHAA RCGFVNVFQF 850
    NTSACTIEKR LSMQYIAMLL SFTVIIVIIH AHETDAAVMH FCFTNQIIVN 900
    LVILRLSVLI FCGIHFLFIA FYDVILNICY DSGVVMVAFV LMRNEGNSTH 950
    VYIVYM 956
    Length:956
    Mass (Da):108,022
    Last modified:March 8, 2011 - v1
    Checksum:i4973A99B515B61CC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    ABIR02000742 Genomic DNA. Translation: EFV58315.1.
    RefSeqiXP_003376440.1. XM_003376392.1.

    Genome annotation databases

    EnsemblMetazoaiEFV58315; EFV58315; EFV58315.
    GeneIDi10901925.
    KEGGitsp:Tsp_00603.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    ABIR02000742 Genomic DNA. Translation: EFV58315.1 .
    RefSeqi XP_003376440.1. XM_003376392.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai EFV58315 ; EFV58315 ; EFV58315 .
    GeneIDi 10901925.
    KEGGi tsp:Tsp_00603.

    Organism-specific databases

    CTDi 10901925.

    Phylogenomic databases

    KOi K01176.
    OMAi GRCGFIN.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ISS 195Imported.

    Entry informationi

    Entry nameiE5SA29_TRISP
    AccessioniPrimary (citable) accession number: E5SA29
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3