Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

E5S8E6

- E5S8E6_TRISP

UniProt

E5S8E6 - E5S8E6_TRISP

Protein
Submitted name:

Glutamate decarboxylase

Gene

Tsp_00016

Organism
Trichinella spiralis (Trichina worm)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. carboxy-lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Glutamate decarboxylaseImported
    Gene namesi
    ORF Names:Tsp_00016Imported
    OrganismiTrichinella spiralis (Trichina worm)Imported
    Taxonomic identifieri6334 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaEnopleaDorylaimiaTrichocephalidaTrichinellidaeTrichinella
    ProteomesiUP000006823: Unassembled WGS sequence

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    KOiK01580.
    OMAiEYLYTKI.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 2 hits.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    E5S8E6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNTSENRMIE ENQKLMENKF YNDILPLNRS GWLTTEMFIK AVVDLLLEFI    50
    KETNNPNTKV INFHHPTELI AKLDLRIPIN PTSLQKVIED CKEVLKYQVR 100
    TGHPRFFNQL STGLDLISMI GEWLTATVNT NIPGGAISNL YAVNAARHYM 150
    FPRCKAIGMV ETPNLAMFTS EDSHYSIRGA AALVGIGVDN CFPIPVDEKG 200
    KMIPSKLEEE VILAKKNGYV PFFVCAVGGT TVYGAFDPIN EIANICKKYR 250
    MWLHVDAAWG GGILLSKKHR HLANGIEKAD SVTWNPHKLM GALLQCSACL 300
    ICHEGLLFQC NQMCADYLFQ QDKPYDVSYD SGDKAIQCGR HNDVFKLWIM 350
    WRAKGMNGFE QQVNRLMELA KYFTEKIKKT PGYELIMENP EFLNICFWYV 400
    PKNVRHLEST EKKARLDKVA PKIKAKMMSS GSTMVGYQPD KDKPNFFRMI 450
    ISNPATTYED LDFFIEEIIR LGESL 475
    Length:475
    Mass (Da):54,096
    Last modified:March 8, 2011 - v1
    Checksum:i5013451E18B1C449
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    ABIR02000706 Genomic DNA. Translation: EFV58939.1.
    RefSeqiXP_003375816.1. XM_003375768.1.

    Genome annotation databases

    EnsemblMetazoaiEFV58939; EFV58939; EFV58939.
    GeneIDi10901288.
    KEGGitsp:Tsp_00016.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    ABIR02000706 Genomic DNA. Translation: EFV58939.1 .
    RefSeqi XP_003375816.1. XM_003375768.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai EFV58939 ; EFV58939 ; EFV58939 .
    GeneIDi 10901288.
    KEGGi tsp:Tsp_00016.

    Organism-specific databases

    CTDi 10901288.

    Phylogenomic databases

    KOi K01580.
    OMAi EYLYTKI.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 2 hits.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ISS 195Imported.

    Entry informationi

    Entry nameiE5S8E6_TRISP
    AccessioniPrimary (citable) accession number: E5S8E6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3