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E5S8E6

- E5S8E6_TRISP

UniProt

E5S8E6 - E5S8E6_TRISP

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Protein
Submitted name:

Glutamate decarboxylase

Gene

Tsp_00016

Organism
Trichinella spiralis (Trichina worm)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

Cofactori

Note: Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Glutamate decarboxylaseImported
Gene namesi
ORF Names:Tsp_00016Imported
OrganismiTrichinella spiralis (Trichina worm)Imported
Taxonomic identifieri6334 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaEnopleaDorylaimiaTrichocephalidaTrichinellidaeTrichinella
ProteomesiUP000006823: Unassembled WGS sequence

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

InParanoidiE5S8E6.
KOiK01580.
OMAiEYLYTKI.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 2 hits.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

E5S8E6-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MNTSENRMIE ENQKLMENKF YNDILPLNRS GWLTTEMFIK AVVDLLLEFI
60 70 80 90 100
KETNNPNTKV INFHHPTELI AKLDLRIPIN PTSLQKVIED CKEVLKYQVR
110 120 130 140 150
TGHPRFFNQL STGLDLISMI GEWLTATVNT NIPGGAISNL YAVNAARHYM
160 170 180 190 200
FPRCKAIGMV ETPNLAMFTS EDSHYSIRGA AALVGIGVDN CFPIPVDEKG
210 220 230 240 250
KMIPSKLEEE VILAKKNGYV PFFVCAVGGT TVYGAFDPIN EIANICKKYR
260 270 280 290 300
MWLHVDAAWG GGILLSKKHR HLANGIEKAD SVTWNPHKLM GALLQCSACL
310 320 330 340 350
ICHEGLLFQC NQMCADYLFQ QDKPYDVSYD SGDKAIQCGR HNDVFKLWIM
360 370 380 390 400
WRAKGMNGFE QQVNRLMELA KYFTEKIKKT PGYELIMENP EFLNICFWYV
410 420 430 440 450
PKNVRHLEST EKKARLDKVA PKIKAKMMSS GSTMVGYQPD KDKPNFFRMI
460 470
ISNPATTYED LDFFIEEIIR LGESL
Length:475
Mass (Da):54,096
Last modified:March 8, 2011 - v1
Checksum:i5013451E18B1C449
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ABIR02000706 Genomic DNA. Translation: EFV58939.1.
RefSeqiXP_003375816.1. XM_003375768.1.

Genome annotation databases

EnsemblMetazoaiEFV58939; EFV58939; EFV58939.
GeneIDi10901288.
KEGGitsp:Tsp_00016.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ABIR02000706 Genomic DNA. Translation: EFV58939.1 .
RefSeqi XP_003375816.1. XM_003375768.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai EFV58939 ; EFV58939 ; EFV58939 .
GeneIDi 10901288.
KEGGi tsp:Tsp_00016.

Organism-specific databases

CTDi 10901288.

Phylogenomic databases

InParanoidi E5S8E6.
KOi K01580.
OMAi EYLYTKI.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 2 hits.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ISS 195Imported.

Entry informationi

Entry nameiE5S8E6_TRISP
AccessioniPrimary (citable) accession number: E5S8E6
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: November 26, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3