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E5S8E6 (E5S8E6_TRISP) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:Tsp_00016 EMBL EFV58939.1
OrganismTrichinella spiralis (Trichina worm) [Complete proteome] EMBL EFV58939.1
Taxonomic identifier6334 [NCBI]
Taxonomic lineageEukaryotaMetazoaEcdysozoaNematodaEnopleaDorylaimiaTrichocephalidaTrichinellidaeTrichinella

Protein attributes

Sequence length475 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EFV58939.1

Ontologies

Sequences

Sequence LengthMass (Da)Tools
E5S8E6 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: 5013451E18B1C449

FASTA47554,096
        10         20         30         40         50         60 
MNTSENRMIE ENQKLMENKF YNDILPLNRS GWLTTEMFIK AVVDLLLEFI KETNNPNTKV 

        70         80         90        100        110        120 
INFHHPTELI AKLDLRIPIN PTSLQKVIED CKEVLKYQVR TGHPRFFNQL STGLDLISMI 

       130        140        150        160        170        180 
GEWLTATVNT NIPGGAISNL YAVNAARHYM FPRCKAIGMV ETPNLAMFTS EDSHYSIRGA 

       190        200        210        220        230        240 
AALVGIGVDN CFPIPVDEKG KMIPSKLEEE VILAKKNGYV PFFVCAVGGT TVYGAFDPIN 

       250        260        270        280        290        300 
EIANICKKYR MWLHVDAAWG GGILLSKKHR HLANGIEKAD SVTWNPHKLM GALLQCSACL 

       310        320        330        340        350        360 
ICHEGLLFQC NQMCADYLFQ QDKPYDVSYD SGDKAIQCGR HNDVFKLWIM WRAKGMNGFE 

       370        380        390        400        410        420 
QQVNRLMELA KYFTEKIKKT PGYELIMENP EFLNICFWYV PKNVRHLEST EKKARLDKVA 

       430        440        450        460        470 
PKIKAKMMSS GSTMVGYQPD KDKPNFFRMI ISNPATTYED LDFFIEEIIR LGESL 

« Hide

References

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
ABIR02000706 Genomic DNA. Translation: EFV58939.1.
RefSeqXP_003375816.1. XM_003375768.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaEFV58939; EFV58939; EFV58939.
GeneID10901288.
KEGGtsp:Tsp_00016.

Organism-specific databases

CTD10901288.

Phylogenomic databases

KOK01580.
OMAEYLYTKI.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 2 hits.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE5S8E6_TRISP
AccessionPrimary (citable) accession number: E5S8E6
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: May 14, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)