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Protein
Submitted name:

Oxoglutarate dehydrogenase

Gene

Tsp_07708

Organism
Trichinella spiralis (Trichina worm)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Oxoglutarate dehydrogenaseImported
Gene namesi
ORF Names:Tsp_07708Imported
OrganismiTrichinella spiralis (Trichina worm)Imported
Taxonomic identifieri6334 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaEnopleaDorylaimiaTrichocephalidaTrichinellidaeTrichinella
ProteomesiUP000006823 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi6334.EFV59227.

Structurei

3D structure databases

ProteinModelPortaliE5S7M0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiE5S7M0.
KOiK00164.
OMAiKEYNKDR.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR002759. RNase_P/MRP_subunit.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF01900. RNase_P_Rpp14. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

E5S7M0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLLFVVLAE KDLNREFLLP NTTYIGGDRS VLTLGEILQR LKKIYCHHIG
60 70 80 90 100
VEYMHLSNRE QYLWIRKHFE TPSIMELTPD EQKRLFKRLI QFLAKKWPAE
110 120 130 140 150
KRFGLEGCEV LIPAMKQVID CTAALGVDTF VIGMPHRGRL NILANVCRQE
160 170 180 190 200
LEAIFCQFST LQPEDEGSGD VKYHLGVCIE RLNSASGKPI KISVVANPSH
210 220 230 240 250
LEAVDPVVQG KTRAEQFYRN DARGDKVMSI LLHGDAAFSG QGIVYETFDI
260 270 280 290 300
SGLPAYTCHG SIHFIVNKYN YNFAYFISTI SFISARQIGF TTDPRFSRSS
310 320 330 340 350
PYCTDVAKVV NAPIFHVNAD DPEAVMHVCT VASQWRNKFK KDVVCYRRHG
360 370 380 390 400
HNEQDEPSFT QPLMYQKIAK ALPVMDKYAQ KLINAGVVNQ EYVQAEMDHY
410 420 430 440 450
VEIMETAYSN SQKEMFVRNR DWLDSPWKTF FPYDVDLKLK PTGVSVEVLQ
460 470 480 490 500
HIGNIFSAVP KNFRLHSGLE RVLRGRAQMV QSGTSDWALA EAFAFGSLLG
510 520 530 540 550
EGFHVRLSGQ DVERGTFSHR HHVLHDQNVD KNTVEPLNEL WPGKQAQYTV
560 570 580 590 600
CNSSLSEFGV LGFEVGFSLS NPNALVIWEA QFGDFSNNAH GQAKWIRQSG
610 620 630 640 650
IVCLLPHGYE GMGPEHSSAR LERFLQLCCD DEERMKPPGP EFEGRQLMET
660 670 680 690 700
NMIVANCTTP ANFFHLLRRQ MLLPFRKPLI VMTPKSLLRH PEARSPFEDY
710 720 730 740 750
LENTRFKRLI PEDGPASENP EQVKRLVFCS GKLYYELKKE RNNKKLDSDV
760 770 780 790 800
ALCRVEQLSP FPYDLVKEQA EKYKNAQLIW AQEEHKNMGA WLYVHPRLLT
810 820 830 840 850
ALNNGRSVKY AGRAPSASTA TGNKYHHMRE QNKVIADTLE VTMPGIEQKQ
860 870 880 890 900
AGKLYHLFSC AFQFQFIHHY KMVKAKFRYC VFQLILDPSV ELPHSSVTSS
910 920 930 940 950
TIYGAVIAAI KSVFGECGLG QCKHLLKVKV FEDELGIVVI RVLDAHLQTL
960 970 980 990 1000
ITSTPFVRQI SRIPAILKCL FIGGSIRACA KATLNYHRNN LIKDLPKASL
1010 1020 1030 1040 1050
SDSSMIMNTK VFPFHYNQTV PHDYFGFYRL KSSENFPQLI PSFSFVLSAS

ECSTDVP
Length:1,057
Mass (Da):120,216
Last modified:March 8, 2011 - v1
Checksum:iD6732F610A3AD555
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ABIR02000668 Genomic DNA. Translation: EFV59227.1.
RefSeqiXP_003381157.1. XM_003381109.1.

Genome annotation databases

EnsemblMetazoaiEFV59227; EFV59227; EFV59227.
GeneIDi10903599.
KEGGitsp:Tsp_07708.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ABIR02000668 Genomic DNA. Translation: EFV59227.1.
RefSeqiXP_003381157.1. XM_003381109.1.

3D structure databases

ProteinModelPortaliE5S7M0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6334.EFV59227.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiEFV59227; EFV59227; EFV59227.
GeneIDi10903599.
KEGGitsp:Tsp_07708.

Organism-specific databases

CTDi10903599.

Phylogenomic databases

InParanoidiE5S7M0.
KOiK00164.
OMAiKEYNKDR.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR002759. RNase_P/MRP_subunit.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF01900. RNase_P_Rpp14. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ISS 195Imported.

Entry informationi

Entry nameiE5S7M0_TRISP
AccessioniPrimary (citable) accession number: E5S7M0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: June 24, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.