E5S7M0 (E5S7M0_TRISP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Oxoglutarate dehydrogenase EMBL EFV59227.1

Gene names

ORF Names:

Tsp_07708 EMBL EFV59227.1

Organism

Trichinella spiralis (Trichina worm) [Complete proteome] EMBL EFV59227.1

Taxonomic identifier

6334 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Nematoda › Enoplea › Enoplia › Trichocephalida › Trichinellidae › Trichinella

Protein attributes

Sequence length	1057 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EFV59227.1

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	tRNA processing Inferred from electronic annotation. Source: InterPro tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: InterPro ribonuclease activity Inferred from electronic annotation. Source: InterPro thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E5S7M0 [UniParc]. Last modified March 8, 2011. Version 1. Checksum: D6732F610A3AD555	FASTA	1,057	120,216
	10 20 30 40 50 60 MRLLFVVLAE KDLNREFLLP NTTYIGGDRS VLTLGEILQR LKKIYCHHIG VEYMHLSNRE 70 80 90 100 110 120 QYLWIRKHFE TPSIMELTPD EQKRLFKRLI QFLAKKWPAE KRFGLEGCEV LIPAMKQVID 130 140 150 160 170 180 CTAALGVDTF VIGMPHRGRL NILANVCRQE LEAIFCQFST LQPEDEGSGD VKYHLGVCIE 190 200 210 220 230 240 RLNSASGKPI KISVVANPSH LEAVDPVVQG KTRAEQFYRN DARGDKVMSI LLHGDAAFSG 250 260 270 280 290 300 QGIVYETFDI SGLPAYTCHG SIHFIVNKYN YNFAYFISTI SFISARQIGF TTDPRFSRSS 310 320 330 340 350 360 PYCTDVAKVV NAPIFHVNAD DPEAVMHVCT VASQWRNKFK KDVVCYRRHG HNEQDEPSFT 370 380 390 400 410 420 QPLMYQKIAK ALPVMDKYAQ KLINAGVVNQ EYVQAEMDHY VEIMETAYSN SQKEMFVRNR 430 440 450 460 470 480 DWLDSPWKTF FPYDVDLKLK PTGVSVEVLQ HIGNIFSAVP KNFRLHSGLE RVLRGRAQMV 490 500 510 520 530 540 QSGTSDWALA EAFAFGSLLG EGFHVRLSGQ DVERGTFSHR HHVLHDQNVD KNTVEPLNEL 550 560 570 580 590 600 WPGKQAQYTV CNSSLSEFGV LGFEVGFSLS NPNALVIWEA QFGDFSNNAH GQAKWIRQSG 610 620 630 640 650 660 IVCLLPHGYE GMGPEHSSAR LERFLQLCCD DEERMKPPGP EFEGRQLMET NMIVANCTTP 670 680 690 700 710 720 ANFFHLLRRQ MLLPFRKPLI VMTPKSLLRH PEARSPFEDY LENTRFKRLI PEDGPASENP 730 740 750 760 770 780 EQVKRLVFCS GKLYYELKKE RNNKKLDSDV ALCRVEQLSP FPYDLVKEQA EKYKNAQLIW 790 800 810 820 830 840 AQEEHKNMGA WLYVHPRLLT ALNNGRSVKY AGRAPSASTA TGNKYHHMRE QNKVIADTLE 850 860 870 880 890 900 VTMPGIEQKQ AGKLYHLFSC AFQFQFIHHY KMVKAKFRYC VFQLILDPSV ELPHSSVTSS 910 920 930 940 950 960 TIYGAVIAAI KSVFGECGLG QCKHLLKVKV FEDELGIVVI RVLDAHLQTL ITSTPFVRQI 970 980 990 1000 1010 1020 SRIPAILKCL FIGGSIRACA KATLNYHRNN LIKDLPKASL SDSSMIMNTK VFPFHYNQTV 1030 1040 1050 PHDYFGFYRL KSSENFPQLI PSFSFVLSAS ECSTDVP

References

[1]

"The draft genome of the parasitic nematode Trichinella spiralis." Mitreva M., Jasmer D.P., Zarlenga D.S., Wang Z., Abubucker S., Martin J., Taylor C.M., Yin Y., Fulton L., Minx P., Yang S.P., Warren W.C., Fulton R.S., Bhonagiri V., Zhang X., Hallsworth-Pepin K., Clifton S.W., McCarter J.P. , Appleton J., Mardis E.R., Wilson R.K. Nat. Genet. 43:228-235(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ISS 195 EMBL EFV59227.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	ABIR02000668 Genomic DNA. Translation: EFV59227.1.
RefSeq	XP_003381157.1. XM_003381109.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	EFV59227; EFV59227; EFV59227.
GeneID	10903599.
KEGG	tsp:Tsp_07708.
Organism-specific databases
CTD	10903599.
Phylogenomic databases
KO	K00164.
OMA	CNEDQRY.
Family and domain databases
InterPro	IPR011603. 2oxoglutarate_DH_E1. IPR001017. DH_E1. IPR002759. RNase_P/MRP_subunit. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
PANTHER	PTHR23152. PTHR23152. 1 hit.
Pfam	PF00676. E1_dh. 1 hit. PF01900. RNase_P_Rpp14. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E5S7M0_TRISP

Accession

Primary (citable) accession number: E5S7M0

Entry history

Integrated into UniProtKB/TrEMBL:	March 8, 2011
Last sequence update:	March 8, 2011
Last modified:	April 3, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)