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E5S7M0

- E5S7M0_TRISP

UniProt

E5S7M0 - E5S7M0_TRISP

Protein
Submitted name:

Oxoglutarate dehydrogenase

Gene

Tsp_07708

Organism
Trichinella spiralis (Trichina worm)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: InterPro
    2. ribonuclease activity Source: InterPro
    3. thiamine pyrophosphate binding Source: InterPro

    GO - Biological processi

    1. tricarboxylic acid cycle Source: InterPro
    2. tRNA processing Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Oxoglutarate dehydrogenaseImported
    Gene namesi
    ORF Names:Tsp_07708Imported
    OrganismiTrichinella spiralis (Trichina worm)Imported
    Taxonomic identifieri6334 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaEnopleaDorylaimiaTrichocephalidaTrichinellidaeTrichinella
    ProteomesiUP000006823: Unassembled WGS sequence

    Structurei

    3D structure databases

    ProteinModelPortaliE5S7M0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK00164.
    OMAiDIAFIRI.

    Family and domain databases

    Gene3Di3.40.50.970. 2 hits.
    InterProiIPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR002759. RNase_P/MRP_subunit.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view]
    PANTHERiPTHR23152. PTHR23152. 1 hit.
    PfamiPF00676. E1_dh. 1 hit.
    PF01900. RNase_P_Rpp14. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTiSM00861. Transket_pyr. 1 hit.
    [Graphical view]
    SUPFAMiSSF52518. SSF52518. 2 hits.
    TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    E5S7M0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRLLFVVLAE KDLNREFLLP NTTYIGGDRS VLTLGEILQR LKKIYCHHIG     50
    VEYMHLSNRE QYLWIRKHFE TPSIMELTPD EQKRLFKRLI QFLAKKWPAE 100
    KRFGLEGCEV LIPAMKQVID CTAALGVDTF VIGMPHRGRL NILANVCRQE 150
    LEAIFCQFST LQPEDEGSGD VKYHLGVCIE RLNSASGKPI KISVVANPSH 200
    LEAVDPVVQG KTRAEQFYRN DARGDKVMSI LLHGDAAFSG QGIVYETFDI 250
    SGLPAYTCHG SIHFIVNKYN YNFAYFISTI SFISARQIGF TTDPRFSRSS 300
    PYCTDVAKVV NAPIFHVNAD DPEAVMHVCT VASQWRNKFK KDVVCYRRHG 350
    HNEQDEPSFT QPLMYQKIAK ALPVMDKYAQ KLINAGVVNQ EYVQAEMDHY 400
    VEIMETAYSN SQKEMFVRNR DWLDSPWKTF FPYDVDLKLK PTGVSVEVLQ 450
    HIGNIFSAVP KNFRLHSGLE RVLRGRAQMV QSGTSDWALA EAFAFGSLLG 500
    EGFHVRLSGQ DVERGTFSHR HHVLHDQNVD KNTVEPLNEL WPGKQAQYTV 550
    CNSSLSEFGV LGFEVGFSLS NPNALVIWEA QFGDFSNNAH GQAKWIRQSG 600
    IVCLLPHGYE GMGPEHSSAR LERFLQLCCD DEERMKPPGP EFEGRQLMET 650
    NMIVANCTTP ANFFHLLRRQ MLLPFRKPLI VMTPKSLLRH PEARSPFEDY 700
    LENTRFKRLI PEDGPASENP EQVKRLVFCS GKLYYELKKE RNNKKLDSDV 750
    ALCRVEQLSP FPYDLVKEQA EKYKNAQLIW AQEEHKNMGA WLYVHPRLLT 800
    ALNNGRSVKY AGRAPSASTA TGNKYHHMRE QNKVIADTLE VTMPGIEQKQ 850
    AGKLYHLFSC AFQFQFIHHY KMVKAKFRYC VFQLILDPSV ELPHSSVTSS 900
    TIYGAVIAAI KSVFGECGLG QCKHLLKVKV FEDELGIVVI RVLDAHLQTL 950
    ITSTPFVRQI SRIPAILKCL FIGGSIRACA KATLNYHRNN LIKDLPKASL 1000
    SDSSMIMNTK VFPFHYNQTV PHDYFGFYRL KSSENFPQLI PSFSFVLSAS 1050
    ECSTDVP 1057
    Length:1,057
    Mass (Da):120,216
    Last modified:March 8, 2011 - v1
    Checksum:iD6732F610A3AD555
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    ABIR02000668 Genomic DNA. Translation: EFV59227.1.
    RefSeqiXP_003381157.1. XM_003381109.1.

    Genome annotation databases

    EnsemblMetazoaiEFV59227; EFV59227; EFV59227.
    GeneIDi10903599.
    KEGGitsp:Tsp_07708.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    ABIR02000668 Genomic DNA. Translation: EFV59227.1 .
    RefSeqi XP_003381157.1. XM_003381109.1.

    3D structure databases

    ProteinModelPortali E5S7M0.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai EFV59227 ; EFV59227 ; EFV59227 .
    GeneIDi 10903599.
    KEGGi tsp:Tsp_07708.

    Organism-specific databases

    CTDi 10903599.

    Phylogenomic databases

    KOi K00164.
    OMAi DIAFIRI.

    Family and domain databases

    Gene3Di 3.40.50.970. 2 hits.
    InterProi IPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR002759. RNase_P/MRP_subunit.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view ]
    PANTHERi PTHR23152. PTHR23152. 1 hit.
    Pfami PF00676. E1_dh. 1 hit.
    PF01900. RNase_P_Rpp14. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTi SM00861. Transket_pyr. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52518. SSF52518. 2 hits.
    TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ISS 195Imported.

    Entry informationi

    Entry nameiE5S7M0_TRISP
    AccessioniPrimary (citable) accession number: E5S7M0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3