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E5S6M6

- E5S6M6_TRISP

UniProt

E5S6M6 - E5S6M6_TRISP

Protein
Submitted name:

Succinate dehydrogenase, flavoprotein subunit

Gene

Tsp_06974

Organism
Trichinella spiralis (Trichina worm)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 20 (01 Oct 2014)
      Sequence version 1 (08 Mar 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. flavin adenine dinucleotide binding Source: InterPro
    2. oxidoreductase activity, acting on the CH-CH group of donors Source: InterPro
    3. phosphatidylserine decarboxylase activity Source: InterPro

    GO - Biological processi

    1. electron transport chain Source: InterPro
    2. phospholipid biosynthetic process Source: InterPro
    3. tricarboxylic acid cycle Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Succinate dehydrogenase, flavoprotein subunitImported
    Gene namesi
    ORF Names:Tsp_06974Imported
    OrganismiTrichinella spiralis (Trichina worm)Imported
    Taxonomic identifieri6334 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaEnopleaDorylaimiaTrichocephalidaTrichinellidaeTrichinella
    ProteomesiUP000006823: Unassembled WGS sequence

    Structurei

    3D structure databases

    ProteinModelPortaliE5S6M6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK00234.
    OMAiSELRINM.

    Family and domain databases

    Gene3Di1.20.58.100. 1 hit.
    3.90.700.10. 1 hit.
    InterProiIPR003953. FAD_bind_dom.
    IPR003952. FRD_SDH_FAD_BS.
    IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
    IPR003817. PS_Dcarbxylase.
    IPR027477. Succ_DH/fumarate_Rdtase_cat.
    IPR011281. Succ_DH_flav_su_fwd.
    IPR014006. Succ_Dhase_FrdA_Gneg.
    [Graphical view]
    PfamiPF00890. FAD_binding_2. 1 hit.
    PF02666. PS_Dcarbxylase. 2 hits.
    PF02910. Succ_DH_flav_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF46977. SSF46977. 1 hit.
    SSF56425. SSF56425. 1 hit.
    TIGRFAMsiTIGR01816. sdhA_forward. 1 hit.
    TIGR01812. sdhA_frdA_Gneg. 1 hit.
    PROSITEiPS00504. FRD_SDH_FAD_BINDING. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E5S6M6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MMSKLSSVNV NLLKRCLFFN PQAYSSYESR RFVSGYEIVD HTYDAVIVGA    50
    GGAGLRAAMG LVEAGFKTAV VTKLFPTRSH TVAAQGGVNA ALGNMEPDDW 100
    RWHFYDTVKG SDWLGDQDAI HYMCREAPRA VLELENYGMP FSRTKEGKIY 150
    QRAFGGQSLD YGRGGQAHRT CCVADRTGHS MLHTLYGRTL AYDCKYFIEY 200
    LALDLLMNKN RCVGVIAWNL EDGKLHRFHS NNTILATGGY GRAYFSCTSA 250
    HTCTGDGTAM VSRAGLPNAD MEFVQFHPTG IYGAGCLITE GVRGEGGYLI 300
    NSKGERFMER YAPNAKDLAS RDVVSRAMAI EIREGRGVGA QKDHIYLQLH 350
    HLPANLIHDR LPGIAETAHI FAGVDCTKEP IPVLPTVHYN MGGIPTNHTA 400
    QVLTFKPGSG DQIIQGLYAA GETAAHSVHG ANRLGANSLL DLVIFGRACA 450
    LTIAKTCKPG EKFPDLPANA GERSVANLDK LRQANGTITV ADLRLKMQKT 500
    MQEHASVFRT GEVLQEGCKK MEGIYKQLEN VKLSDRGLIW NTDLVEAIEL 550
    QNLMLNAVQT INCAEARKES RGAHAREDFK QRIDEFDYSK PLDGQTKLPF 600
    EKHWRKHSMV WMDEVTGRTR IEYRPVIDKT LDKAEVDWVQ PKVSPADGVV 650
    QWCGKISDGV LSQIKGITYH INDFFGQVEI PGIDFEDLKT NKKGMRHGSL 700
    SDLSYSPGYD TEKGRKMGDF RLGSSVVLIF EAPADFHFSV SSGQRIKYGE 750
    MLGDINSQAY NLESS 765
    Length:765
    Mass (Da):84,641
    Last modified:March 8, 2011 - v1
    Checksum:iA31A4EBF81F38C2A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    ABIR02000599 Genomic DNA. Translation: EFV59576.1.
    RefSeqiXP_003380827.1. XM_003380779.1.

    Genome annotation databases

    EnsemblMetazoaiEFV59576; EFV59576; EFV59576.
    GeneIDi10903265.
    KEGGitsp:Tsp_06974.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    ABIR02000599 Genomic DNA. Translation: EFV59576.1 .
    RefSeqi XP_003380827.1. XM_003380779.1.

    3D structure databases

    ProteinModelPortali E5S6M6.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai EFV59576 ; EFV59576 ; EFV59576 .
    GeneIDi 10903265.
    KEGGi tsp:Tsp_06974.

    Organism-specific databases

    CTDi 10903265.

    Phylogenomic databases

    KOi K00234.
    OMAi SELRINM.

    Family and domain databases

    Gene3Di 1.20.58.100. 1 hit.
    3.90.700.10. 1 hit.
    InterProi IPR003953. FAD_bind_dom.
    IPR003952. FRD_SDH_FAD_BS.
    IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
    IPR003817. PS_Dcarbxylase.
    IPR027477. Succ_DH/fumarate_Rdtase_cat.
    IPR011281. Succ_DH_flav_su_fwd.
    IPR014006. Succ_Dhase_FrdA_Gneg.
    [Graphical view ]
    Pfami PF00890. FAD_binding_2. 1 hit.
    PF02666. PS_Dcarbxylase. 2 hits.
    PF02910. Succ_DH_flav_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46977. SSF46977. 1 hit.
    SSF56425. SSF56425. 1 hit.
    TIGRFAMsi TIGR01816. sdhA_forward. 1 hit.
    TIGR01812. sdhA_frdA_Gneg. 1 hit.
    PROSITEi PS00504. FRD_SDH_FAD_BINDING. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ISS 195Imported.

    Entry informationi

    Entry nameiE5S6M6_TRISP
    AccessioniPrimary (citable) accession number: E5S6M6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 8, 2011
    Last sequence update: March 8, 2011
    Last modified: October 1, 2014
    This is version 20 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3