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E5S6M6

- E5S6M6_TRISP

UniProt

E5S6M6 - E5S6M6_TRISP

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Protein
Submitted name:

Succinate dehydrogenase, flavoprotein subunit

Gene

Tsp_06974

Organism
Trichinella spiralis (Trichina worm)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. flavin adenine dinucleotide binding Source: InterPro
  2. oxidoreductase activity, acting on the CH-CH group of donors Source: InterPro
  3. phosphatidylserine decarboxylase activity Source: InterPro

GO - Biological processi

  1. electron transport chain Source: InterPro
  2. phospholipid biosynthetic process Source: InterPro
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Succinate dehydrogenase, flavoprotein subunitImported
Gene namesi
ORF Names:Tsp_06974Imported
OrganismiTrichinella spiralis (Trichina worm)Imported
Taxonomic identifieri6334 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaEnopleaDorylaimiaTrichocephalidaTrichinellidaeTrichinella
ProteomesiUP000006823: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliE5S6M6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiE5S6M6.
KOiK00234.
OMAiSELRINM.

Family and domain databases

Gene3Di1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProiIPR003953. FAD_bind_dom.
IPR003952. FRD_SDH_FAD_BS.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR003817. PS_Dcarbxylase.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
IPR011281. Succ_DH_flav_su_fwd.
IPR014006. Succ_Dhase_FrdA_Gneg.
[Graphical view]
PfamiPF00890. FAD_binding_2. 1 hit.
PF02666. PS_Dcarbxylase. 2 hits.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view]
SUPFAMiSSF46977. SSF46977. 1 hit.
SSF56425. SSF56425. 1 hit.
TIGRFAMsiTIGR01816. sdhA_forward. 1 hit.
TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITEiPS00504. FRD_SDH_FAD_BINDING. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E5S6M6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MMSKLSSVNV NLLKRCLFFN PQAYSSYESR RFVSGYEIVD HTYDAVIVGA
60 70 80 90 100
GGAGLRAAMG LVEAGFKTAV VTKLFPTRSH TVAAQGGVNA ALGNMEPDDW
110 120 130 140 150
RWHFYDTVKG SDWLGDQDAI HYMCREAPRA VLELENYGMP FSRTKEGKIY
160 170 180 190 200
QRAFGGQSLD YGRGGQAHRT CCVADRTGHS MLHTLYGRTL AYDCKYFIEY
210 220 230 240 250
LALDLLMNKN RCVGVIAWNL EDGKLHRFHS NNTILATGGY GRAYFSCTSA
260 270 280 290 300
HTCTGDGTAM VSRAGLPNAD MEFVQFHPTG IYGAGCLITE GVRGEGGYLI
310 320 330 340 350
NSKGERFMER YAPNAKDLAS RDVVSRAMAI EIREGRGVGA QKDHIYLQLH
360 370 380 390 400
HLPANLIHDR LPGIAETAHI FAGVDCTKEP IPVLPTVHYN MGGIPTNHTA
410 420 430 440 450
QVLTFKPGSG DQIIQGLYAA GETAAHSVHG ANRLGANSLL DLVIFGRACA
460 470 480 490 500
LTIAKTCKPG EKFPDLPANA GERSVANLDK LRQANGTITV ADLRLKMQKT
510 520 530 540 550
MQEHASVFRT GEVLQEGCKK MEGIYKQLEN VKLSDRGLIW NTDLVEAIEL
560 570 580 590 600
QNLMLNAVQT INCAEARKES RGAHAREDFK QRIDEFDYSK PLDGQTKLPF
610 620 630 640 650
EKHWRKHSMV WMDEVTGRTR IEYRPVIDKT LDKAEVDWVQ PKVSPADGVV
660 670 680 690 700
QWCGKISDGV LSQIKGITYH INDFFGQVEI PGIDFEDLKT NKKGMRHGSL
710 720 730 740 750
SDLSYSPGYD TEKGRKMGDF RLGSSVVLIF EAPADFHFSV SSGQRIKYGE
760
MLGDINSQAY NLESS
Length:765
Mass (Da):84,641
Last modified:March 8, 2011 - v1
Checksum:iA31A4EBF81F38C2A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
ABIR02000599 Genomic DNA. Translation: EFV59576.1.
RefSeqiXP_003380827.1. XM_003380779.1.

Genome annotation databases

EnsemblMetazoaiEFV59576; EFV59576; EFV59576.
GeneIDi10903265.
KEGGitsp:Tsp_06974.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
ABIR02000599 Genomic DNA. Translation: EFV59576.1 .
RefSeqi XP_003380827.1. XM_003380779.1.

3D structure databases

ProteinModelPortali E5S6M6.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai EFV59576 ; EFV59576 ; EFV59576 .
GeneIDi 10903265.
KEGGi tsp:Tsp_06974.

Organism-specific databases

CTDi 10903265.

Phylogenomic databases

InParanoidi E5S6M6.
KOi K00234.
OMAi SELRINM.

Family and domain databases

Gene3Di 1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProi IPR003953. FAD_bind_dom.
IPR003952. FRD_SDH_FAD_BS.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR003817. PS_Dcarbxylase.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
IPR011281. Succ_DH_flav_su_fwd.
IPR014006. Succ_Dhase_FrdA_Gneg.
[Graphical view ]
Pfami PF00890. FAD_binding_2. 1 hit.
PF02666. PS_Dcarbxylase. 2 hits.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view ]
SUPFAMi SSF46977. SSF46977. 1 hit.
SSF56425. SSF56425. 1 hit.
TIGRFAMsi TIGR01816. sdhA_forward. 1 hit.
TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITEi PS00504. FRD_SDH_FAD_BINDING. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ISS 195Imported.

Entry informationi

Entry nameiE5S6M6_TRISP
AccessioniPrimary (citable) accession number: E5S6M6
Entry historyi
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: October 29, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3