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E5S6M6 (E5S6M6_TRISP) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:Tsp_06974 EMBL EFV59576.1
OrganismTrichinella spiralis (Trichina worm) [Complete proteome] EMBL EFV59576.1
Taxonomic identifier6334 [NCBI]
Taxonomic lineageEukaryotaMetazoaEcdysozoaNematodaEnopleaDorylaimiaTrichocephalidaTrichinellidaeTrichinella

Protein attributes

Sequence length765 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EFV59576.1

Sequences

Sequence LengthMass (Da)Tools
E5S6M6 [UniParc].

Last modified March 8, 2011. Version 1.
Checksum: A31A4EBF81F38C2A

FASTA76584,641
        10         20         30         40         50         60 
MMSKLSSVNV NLLKRCLFFN PQAYSSYESR RFVSGYEIVD HTYDAVIVGA GGAGLRAAMG 

        70         80         90        100        110        120 
LVEAGFKTAV VTKLFPTRSH TVAAQGGVNA ALGNMEPDDW RWHFYDTVKG SDWLGDQDAI 

       130        140        150        160        170        180 
HYMCREAPRA VLELENYGMP FSRTKEGKIY QRAFGGQSLD YGRGGQAHRT CCVADRTGHS 

       190        200        210        220        230        240 
MLHTLYGRTL AYDCKYFIEY LALDLLMNKN RCVGVIAWNL EDGKLHRFHS NNTILATGGY 

       250        260        270        280        290        300 
GRAYFSCTSA HTCTGDGTAM VSRAGLPNAD MEFVQFHPTG IYGAGCLITE GVRGEGGYLI 

       310        320        330        340        350        360 
NSKGERFMER YAPNAKDLAS RDVVSRAMAI EIREGRGVGA QKDHIYLQLH HLPANLIHDR 

       370        380        390        400        410        420 
LPGIAETAHI FAGVDCTKEP IPVLPTVHYN MGGIPTNHTA QVLTFKPGSG DQIIQGLYAA 

       430        440        450        460        470        480 
GETAAHSVHG ANRLGANSLL DLVIFGRACA LTIAKTCKPG EKFPDLPANA GERSVANLDK 

       490        500        510        520        530        540 
LRQANGTITV ADLRLKMQKT MQEHASVFRT GEVLQEGCKK MEGIYKQLEN VKLSDRGLIW 

       550        560        570        580        590        600 
NTDLVEAIEL QNLMLNAVQT INCAEARKES RGAHAREDFK QRIDEFDYSK PLDGQTKLPF 

       610        620        630        640        650        660 
EKHWRKHSMV WMDEVTGRTR IEYRPVIDKT LDKAEVDWVQ PKVSPADGVV QWCGKISDGV 

       670        680        690        700        710        720 
LSQIKGITYH INDFFGQVEI PGIDFEDLKT NKKGMRHGSL SDLSYSPGYD TEKGRKMGDF 

       730        740        750        760 
RLGSSVVLIF EAPADFHFSV SSGQRIKYGE MLGDINSQAY NLESS 

« Hide

References

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
ABIR02000599 Genomic DNA. Translation: EFV59576.1.
RefSeqXP_003380827.1. XM_003380779.1.

3D structure databases

ProteinModelPortalE5S6M6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaEFV59576; EFV59576; EFV59576.
GeneID10903265.
KEGGtsp:Tsp_06974.

Organism-specific databases

CTD10903265.

Phylogenomic databases

KOK00234.
OMAINVFGKR.

Family and domain databases

Gene3D1.20.58.100. 1 hit.
3.90.700.10. 1 hit.
InterProIPR003953. FAD_bind_dom.
IPR003952. FRD_SDH_FAD_BS.
IPR015939. Fum_Rdtase/Succ_DH_flav-like_C.
IPR003817. PS_Dcarbxylase.
IPR027477. Succ_DH/fumarate_Rdtase_cat.
IPR011281. Succ_DH_flav_su_fwd.
IPR014006. Succ_Dhase_FrdA_Gneg.
[Graphical view]
PfamPF00890. FAD_binding_2. 1 hit.
PF02666. PS_Dcarbxylase. 2 hits.
PF02910. Succ_DH_flav_C. 1 hit.
[Graphical view]
SUPFAMSSF46977. SSF46977. 1 hit.
SSF56425. SSF56425. 1 hit.
TIGRFAMsTIGR01816. sdhA_forward. 1 hit.
TIGR01812. sdhA_frdA_Gneg. 1 hit.
PROSITEPS00504. FRD_SDH_FAD_BINDING. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE5S6M6_TRISP
AccessionPrimary (citable) accession number: E5S6M6
Entry history
Integrated into UniProtKB/TrEMBL: March 8, 2011
Last sequence update: March 8, 2011
Last modified: March 19, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)