E5RYE7 (E5RYE7_TRISP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Anaerobic ribonucleoside-triphosphate reductase, beta subunit EMBL EFV62449.1

Gene names

ORF Names:

Tsp_07198 EMBL EFV62449.1

Organism

Trichinella spiralis (Trichina worm) [Complete proteome] EMBL EFV62449.1

Taxonomic identifier

6334 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Nematoda › Enoplea › Enoplia › Trichocephalida › Trichinellidae › Trichinella

Protein attributes

Sequence length	453 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EFV62449.1

Ontologies

Keywords
Ligand	GTP-binding RuleBase RU000323 Nucleotide-binding
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	GTP catabolic process Inferred from electronic annotation. Source: GOC
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	GTP binding Inferred from electronic annotation. Source: UniProtKB-KW GTPase activity Inferred from electronic annotation. Source: InterPro translation elongation factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E5RYE7 [UniParc]. Last modified March 8, 2011. Version 1. Checksum: 3C22E596B995DD55	FASTA	453	50,518
	10 20 30 40 50 60 MYYLSQMSLK QVVKRSFSPF VTKLFAADYF RIEYELSNTL IYRKFCTQAM KENFNIGTIG 70 80 90 100 110 120 HIDHGKTTLT AALTKVLSKT TNTKFVPFDE IDKAPEEQQR GITISIAHVG YETKKRKYSH 130 140 150 160 170 180 TDCPGHKDFI KNMICGATQM DAAILVVDAA EGTMPQTREH VMLAKQVGVQ RIVVFINKAE 190 200 210 220 230 240 MVDADLLELV KLEVCELLDE FGFDSSKAPV VVGSALMALD QVDGDFGQRS VERLLEELDK 250 260 270 280 290 300 LEAPKRDTNA SLILPVSSSF VVTGRGTVVV GTIEKGILRK GDKVQLVGAG KCLDTIVSDI 310 320 330 340 350 360 QIFKRPVKEV RAGDHVGVLC RHVHHSDVER GMWMTTPNSV PICNHFEAQA YFLKPEESGI 370 380 390 400 410 420 TSCPIRTGFT QKIMCTTWDQ TGRLVLTNTD MVMPGDNFIM QCILQRPMPL QVGLHFTLMH 430 440 450 GCSTIVRGVV TSLFNNLPVY SLKDTKTLTK KVQ

References

[1]

"The draft genome of the parasitic nematode Trichinella spiralis." Mitreva M., Jasmer D.P., Zarlenga D.S., Wang Z., Abubucker S., Martin J., Taylor C.M., Yin Y., Fulton L., Minx P., Yang S.P., Warren W.C., Fulton R.S., Bhonagiri V., Zhang X., Hallsworth-Pepin K., Clifton S.W., McCarter J.P. , Appleton J., Mardis E.R., Wilson R.K. Nat. Genet. 43:228-235(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ISS 195 EMBL EFV62449.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	ABIR02000027 Genomic DNA. Translation: EFV62449.1.
RefSeq	XP_003381497.1. XM_003381449.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	EFV62449; EFV62449; EFV62449.
GeneID	10898140.
KEGG	tsp:Tsp_07198.
Organism-specific databases
CTD	10898140.
Phylogenomic databases
KO	K02358.
Family and domain databases
InterPro	IPR000795. EF_GTP-bd_dom. IPR005225. Small_GTP-bd_dom. IPR009001. Transl_elong_EF1A/Init_IF2_C. IPR004161. Transl_elong_EFTu/EF1A_2. IPR004541. Transl_elong_EFTu/EF1A_bac/org. IPR004160. Transl_elong_EFTu/EF1A_C. IPR009000. Transl_elong_init/rib_B-barrel. [Graphical view]
PANTHER	PTHR23115:SF31. PTHR23115:SF31. 1 hit.
Pfam	PF00009. GTP_EFTU. 1 hit. PF03144. GTP_EFTU_D2. 1 hit. PF03143. GTP_EFTU_D3. 1 hit. [Graphical view]
PRINTS	PR00315. ELONGATNFCT.
SUPFAM	SSF50465. Elong_init_C. 1 hit. SSF50447. Translat_factor. 1 hit.
TIGRFAMs	TIGR00231. small_GTP. 1 hit.
PROSITE	PS00301. EFACTOR_GTP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E5RYE7_TRISP

Accession

Primary (citable) accession number: E5RYE7

Entry history

Integrated into UniProtKB/TrEMBL:	March 8, 2011
Last sequence update:	March 8, 2011
Last modified:	April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)