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Protein
Submitted name:

UBX domain-containing protein 2B

Gene

UBXN2B

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
UBX domain-containing protein 2BImported
Gene namesi
Name:UBXN2BImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 8

Organism-specific databases

HGNCiHGNC:27035. UBXN2B.

PTM / Processingi

Proteomic databases

EPDiE5RJ36.
PaxDbiE5RJ36.

Expressioni

Gene expression databases

BgeeiE5RJ36.
ExpressionAtlasiE5RJ36. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000382507.

Structurei

3D structure databases

ProteinModelPortaliE5RJ36.
SMRiE5RJ36. Positions 140-178.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini141 – 19656SEPInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG2086. Eukaryota.
ENOG410YGXU. LUCA.
GeneTreeiENSGT00520000055567.

Family and domain databases

InterProiIPR012989. SEP_domain.
[Graphical view]
PfamiPF08059. SEP. 1 hit.
[Graphical view]
SMARTiSM00553. SEP. 1 hit.
[Graphical view]
SUPFAMiSSF102848. SSF102848. 1 hit.
PROSITEiPS51399. SEP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E5RJ36-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEGGGPEPG EQERRSSGPR PPSARDLQLA LAELYEDEVK CKSSKSNRPK
60 70 80 90 100
ATVFKSPRTP PQRFYSSEHE YSGLNIVRPS TGKIVNELFK EAREHGAVPL
110 120 130 140 150
NEATRASGDD KSKSFTGGGY RLGSSFCKRS EYIYGENQLQ DVQILLKLWS
160 170 180 190
NGFSLDDGEL RPYNEPTNAQ FLESVKRGVT LIACMPEIQQ LMLEIF
Length:196
Mass (Da):21,863
Last modified:February 8, 2011 - v1
Checksum:i2FE7EC6B7402535D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC009927 Genomic DNA. No translation available.
RefSeqiXP_005251223.1. XM_005251166.1.
UniGeneiHs.155572.

Genome annotation databases

EnsembliENST00000523409; ENSP00000428314; ENSG00000215114.
GeneIDi137886.
UCSCiuc064nbc.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC009927 Genomic DNA. No translation available.
RefSeqiXP_005251223.1. XM_005251166.1.
UniGeneiHs.155572.

3D structure databases

ProteinModelPortaliE5RJ36.
SMRiE5RJ36. Positions 140-178.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000382507.

Proteomic databases

EPDiE5RJ36.
PaxDbiE5RJ36.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000523409; ENSP00000428314; ENSG00000215114.
GeneIDi137886.
UCSCiuc064nbc.1. human.

Organism-specific databases

CTDi137886.
HGNCiHGNC:27035. UBXN2B.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG2086. Eukaryota.
ENOG410YGXU. LUCA.
GeneTreeiENSGT00520000055567.

Miscellaneous databases

ChiTaRSiUBXN2B. human.
GenomeRNAii137886.

Gene expression databases

BgeeiE5RJ36.
ExpressionAtlasiE5RJ36. baseline and differential.

Family and domain databases

InterProiIPR012989. SEP_domain.
[Graphical view]
PfamiPF08059. SEP. 1 hit.
[Graphical view]
SMARTiSM00553. SEP. 1 hit.
[Graphical view]
SUPFAMiSSF102848. SSF102848. 1 hit.
PROSITEiPS51399. SEP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "DNA sequence and analysis of human chromosome 8."
    Nusbaum C., Mikkelsen T.S., Zody M.C., Asakawa S., Taudien S., Garber M., Kodira C.D., Schueler M.G., Shimizu A., Whittaker C.A., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Yang X., Allen N.R., Anderson S., Asakawa T.
    , Blechschmidt K., Bloom T., Borowsky M.L., Butler J., Cook A., Corum B., DeArellano K., DeCaprio D., Dooley K.T., Dorris L. III, Engels R., Glockner G., Hafez N., Hagopian D.S., Hall J.L., Ishikawa S.K., Jaffe D.B., Kamat A., Kudoh J., Lehmann R., Lokitsang T., Macdonald P., Major J.E., Matthews C.D., Mauceli E., Menzel U., Mihalev A.H., Minoshima S., Murayama Y., Naylor J.W., Nicol R., Nguyen C., O'Leary S.B., O'Neill K., Parker S.C., Polley A., Raymond C.K., Reichwald K., Rodriguez J., Sasaki T., Schilhabel M., Siddiqui R., Smith C.L., Sneddon T.P., Talamas J.A., Tenzin P., Topham K., Venkataraman V., Wen G., Yamazaki S., Young S.K., Zeng Q., Zimmer A.R., Rosenthal A., Birren B.W., Platzer M., Shimizu N., Lander E.S.
    Nature 439:331-335(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
  4. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  5. "Toward a comprehensive characterization of a human cancer cell phosphoproteome."
    Zhou H., Di Palma S., Preisinger C., Peng M., Polat A.N., Heck A.J., Mohammed S.
    J. Proteome Res. 12:260-271(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiE5RJ36_HUMAN
AccessioniPrimary (citable) accession number: E5RJ36
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: June 8, 2016
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.