Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Pulmonary surfactant-associated protein C

Gene

SFTPC

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Pulmonary surfactant-associated protein CImported
Gene namesi
Name:SFTPCImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 8

Organism-specific databases

HGNCiHGNC:10802. SFTPC.

PTM / Processingi

Proteomic databases

PRIDEiE5RI64.

Expressioni

Gene expression databases

BgeeiE5RI64.
ExpressionAtlasiE5RI64. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliE5RI64.
SMRiE5RI64. Positions 34-144.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini41 – 144104BRICHOSInterPro annotationAdd
BLAST

Phylogenomic databases

GeneTreeiENSGT00390000017162.

Family and domain databases

InterProiIPR007084. BRICHOS_dom.
IPR001729. SP-C.
IPR015091. Surfactant_protein_propep.
[Graphical view]
PfamiPF04089. BRICHOS. 1 hit.
PF08999. SP_C-Propep. 1 hit.
[Graphical view]
SMARTiSM01039. BRICHOS. 1 hit.
SM00019. SF_P. 1 hit.
[Graphical view]
PROSITEiPS50869. BRICHOS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E5RI64-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDVGSKEVLM ESPPVLEMSI GAPEAQQRLA LSEHLVTTAT FSIGSTGLVV
60 70 80 90 100
YDYQQLLIAY KPAPGTCCYI MKIAPESIPS LEALTRKVHN FQMECSLQAK
110 120 130 140
PAVPTSKLGQ AEGRDAGSAP SGGDPAFLGM AVSTLCGEVP LYYI
Length:144
Mass (Da):15,251
Last modified:February 8, 2011 - v1
Checksum:i5DCA83062ED02A22
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC105206 Genomic DNA. No translation available.
RefSeqiNP_001304708.1. NM_001317779.1.
XP_011542915.1. XM_011544613.1.
UniGeneiHs.1074.

Genome annotation databases

EnsembliENST00000524255; ENSP00000429552; ENSG00000168484.
GeneIDi6440.
UCSCiuc064kye.1. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC105206 Genomic DNA. No translation available.
RefSeqiNP_001304708.1. NM_001317779.1.
XP_011542915.1. XM_011544613.1.
UniGeneiHs.1074.

3D structure databases

ProteinModelPortaliE5RI64.
SMRiE5RI64. Positions 34-144.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiE5RI64.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000524255; ENSP00000429552; ENSG00000168484.
GeneIDi6440.
UCSCiuc064kye.1. human.

Organism-specific databases

CTDi6440.
HGNCiHGNC:10802. SFTPC.
GenAtlasiSearch...

Phylogenomic databases

GeneTreeiENSGT00390000017162.

Miscellaneous databases

ChiTaRSiSFTPC. human.
GenomeRNAii6440.
NextBioi35498572.

Gene expression databases

BgeeiE5RI64.
ExpressionAtlasiE5RI64. baseline and differential.

Family and domain databases

InterProiIPR007084. BRICHOS_dom.
IPR001729. SP-C.
IPR015091. Surfactant_protein_propep.
[Graphical view]
PfamiPF04089. BRICHOS. 1 hit.
PF08999. SP_C-Propep. 1 hit.
[Graphical view]
SMARTiSM01039. BRICHOS. 1 hit.
SM00019. SF_P. 1 hit.
[Graphical view]
PROSITEiPS50869. BRICHOS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "DNA sequence and analysis of human chromosome 8."
    Nusbaum C., Mikkelsen T.S., Zody M.C., Asakawa S., Taudien S., Garber M., Kodira C.D., Schueler M.G., Shimizu A., Whittaker C.A., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Yang X., Allen N.R., Anderson S., Asakawa T.
    , Blechschmidt K., Bloom T., Borowsky M.L., Butler J., Cook A., Corum B., DeArellano K., DeCaprio D., Dooley K.T., Dorris L. III, Engels R., Glockner G., Hafez N., Hagopian D.S., Hall J.L., Ishikawa S.K., Jaffe D.B., Kamat A., Kudoh J., Lehmann R., Lokitsang T., Macdonald P., Major J.E., Matthews C.D., Mauceli E., Menzel U., Mihalev A.H., Minoshima S., Murayama Y., Naylor J.W., Nicol R., Nguyen C., O'Leary S.B., O'Neill K., Parker S.C., Polley A., Raymond C.K., Reichwald K., Rodriguez J., Sasaki T., Schilhabel M., Siddiqui R., Smith C.L., Sneddon T.P., Talamas J.A., Tenzin P., Topham K., Venkataraman V., Wen G., Yamazaki S., Young S.K., Zeng Q., Zimmer A.R., Rosenthal A., Birren B.W., Platzer M., Shimizu N., Lander E.S.
    Nature 439:331-335(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiE5RI64_HUMAN
AccessioniPrimary (citable) accession number: E5RI64
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: May 11, 2016
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.