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E5RHU3

- E5RHU3_HUMAN

UniProt

E5RHU3 - E5RHU3_HUMAN

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Protein
Submitted name:

Syndecan-2

Gene

SDC2

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Biological processi

  1. dendrite morphogenesis Source: Ensembl
  2. regulation of dendrite morphogenesis Source: Ensembl
  3. response to caffeine Source: Ensembl
  4. response to hypoxia Source: Ensembl
  5. wound healing Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Syndecan-2Imported
Gene namesi
Name:SDC2Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 8

Organism-specific databases

HGNCiHGNC:10659. SDC2.

Subcellular locationi

GO - Cellular componenti

  1. membrane Source: InterPro
  2. neuronal cell body Source: Ensembl
  3. synapse Source: Ensembl
Complete GO annotation...

Expressioni

Gene expression databases

ExpressionAtlasiE5RHU3. baseline and differential.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00530000063116.

Family and domain databases

InterProiIPR001050. Syndecan.
IPR027789. Syndecan/Neurexin_dom.
[Graphical view]
PANTHERiPTHR10915. PTHR10915. 1 hit.
PfamiPF01034. Syndecan. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

E5RHU3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MYLDNSSIEE ASGVYPIDDD DYASASGSGA DEDVESPELT TSRPLPKILL
60 70 80 90 100
TSAAPKVETT TLNIQNKIPA QTKSPEETDK EKVHLSDSER KMDPAEEDTN
110 120 130 140
VYTEKHSDSL FKRTEVLAAV IAGGVIGFLF AIFLILLLVY RMRKK
Length:145
Mass (Da):15,981
Last modified:June 26, 2013 - v2
Checksum:i9CD54A549102BB01
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei145 – 1451Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP003477 Genomic DNA. No translation available.
AP003548 Genomic DNA. No translation available.
KC877279 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000523877; ENSP00000429662; ENSG00000169439.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP003477 Genomic DNA. No translation available.
AP003548 Genomic DNA. No translation available.
KC877279 Genomic DNA. No translation available.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000523877 ; ENSP00000429662 ; ENSG00000169439 .

Organism-specific databases

HGNCi HGNC:10659. SDC2.
GenAtlasi Search...

Phylogenomic databases

GeneTreei ENSGT00530000063116.

Miscellaneous databases

ChiTaRSi SDC2. human.
NextBioi 35498470.

Gene expression databases

ExpressionAtlasi E5RHU3. baseline and differential.

Family and domain databases

InterProi IPR001050. Syndecan.
IPR027789. Syndecan/Neurexin_dom.
[Graphical view ]
PANTHERi PTHR10915. PTHR10915. 1 hit.
Pfami PF01034. Syndecan. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "DNA sequence and analysis of human chromosome 8."
    Nusbaum C., Mikkelsen T.S., Zody M.C., Asakawa S., Taudien S., Garber M., Kodira C.D., Schueler M.G., Shimizu A., Whittaker C.A., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Yang X., Allen N.R., Anderson S., Asakawa T.
    , Blechschmidt K., Bloom T., Borowsky M.L., Butler J., Cook A., Corum B., DeArellano K., DeCaprio D., Dooley K.T., Dorris L. III, Engels R., Glockner G., Hafez N., Hagopian D.S., Hall J.L., Ishikawa S.K., Jaffe D.B., Kamat A., Kudoh J., Lehmann R., Lokitsang T., Macdonald P., Major J.E., Matthews C.D., Mauceli E., Menzel U., Mihalev A.H., Minoshima S., Murayama Y., Naylor J.W., Nicol R., Nguyen C., O'Leary S.B., O'Neill K., Parker S.C., Polley A., Raymond C.K., Reichwald K., Rodriguez J., Sasaki T., Schilhabel M., Siddiqui R., Smith C.L., Sneddon T.P., Talamas J.A., Tenzin P., Topham K., Venkataraman V., Wen G., Yamazaki S., Young S.K., Zeng Q., Zimmer A.R., Rosenthal A., Birren B.W., Platzer M., Shimizu N., Lander E.S.
    Nature 439:331-335(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiE5RHU3_HUMAN
AccessioniPrimary (citable) accession number: E5RHU3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: June 26, 2013
Last modified: November 26, 2014
This is version 30 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3