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E5RHU3

- E5RHU3_HUMAN

UniProt

E5RHU3 - E5RHU3_HUMAN

Protein
Submitted name:

Syndecan-2

Gene

SDC2

Organism
Homo sapiens (Human)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
  1. Functioni

    GO - Biological processi

    1. dendrite morphogenesis Source: Ensembl
    2. regulation of dendrite morphogenesis Source: Ensembl
    3. response to caffeine Source: Ensembl
    4. response to hypoxia Source: Ensembl
    5. wound healing Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Syndecan-2Imported
    Gene namesi
    Name:SDC2Imported
    OrganismiHomo sapiens (Human)Imported
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 8

    Organism-specific databases

    HGNCiHGNC:10659. SDC2.

    Subcellular locationi

    GO - Cellular componenti

    1. membrane Source: InterPro
    2. neuronal cell body Source: Ensembl

    Expressioni

    Gene expression databases

    ArrayExpressiE5RHU3.

    Family & Domainsi

    Family and domain databases

    InterProiIPR001050. Syndecan.
    IPR027789. Syndecan/Neurexin_dom.
    [Graphical view]
    PANTHERiPTHR10915. PTHR10915. 1 hit.
    PfamiPF01034. Syndecan. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    E5RHU3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MYLDNSSIEE ASGVYPIDDD DYASASGSGA DEDVESPELT TSRPLPKILL    50
    TSAAPKVETT TLNIQNKIPA QTKSPEETDK EKVHLSDSER KMDPAEEDTN 100
    VYTEKHSDSL FKRTEVLAAV IAGGVIGFLF AIFLILLLVY RMRKK 145
    Length:145
    Mass (Da):15,981
    Last modified:June 26, 2013 - v2
    Checksum:i9CD54A549102BB01
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei145 – 1451Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP003477 Genomic DNA. No translation available.
    AP003548 Genomic DNA. No translation available.
    KC877279 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENST00000523877; ENSP00000429662; ENSG00000169439.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP003477 Genomic DNA. No translation available.
    AP003548 Genomic DNA. No translation available.
    KC877279 Genomic DNA. No translation available.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000523877 ; ENSP00000429662 ; ENSG00000169439 .

    Organism-specific databases

    HGNCi HGNC:10659. SDC2.
    GenAtlasi Search...

    Miscellaneous databases

    NextBioi 35498470.

    Gene expression databases

    ArrayExpressi E5RHU3.

    Family and domain databases

    InterProi IPR001050. Syndecan.
    IPR027789. Syndecan/Neurexin_dom.
    [Graphical view ]
    PANTHERi PTHR10915. PTHR10915. 1 hit.
    Pfami PF01034. Syndecan. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "DNA sequence and analysis of human chromosome 8."
      Nusbaum C., Mikkelsen T.S., Zody M.C., Asakawa S., Taudien S., Garber M., Kodira C.D., Schueler M.G., Shimizu A., Whittaker C.A., Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Yang X., Allen N.R., Anderson S., Asakawa T.
      , Blechschmidt K., Bloom T., Borowsky M.L., Butler J., Cook A., Corum B., DeArellano K., DeCaprio D., Dooley K.T., Dorris L. III, Engels R., Glockner G., Hafez N., Hagopian D.S., Hall J.L., Ishikawa S.K., Jaffe D.B., Kamat A., Kudoh J., Lehmann R., Lokitsang T., Macdonald P., Major J.E., Matthews C.D., Mauceli E., Menzel U., Mihalev A.H., Minoshima S., Murayama Y., Naylor J.W., Nicol R., Nguyen C., O'Leary S.B., O'Neill K., Parker S.C., Polley A., Raymond C.K., Reichwald K., Rodriguez J., Sasaki T., Schilhabel M., Siddiqui R., Smith C.L., Sneddon T.P., Talamas J.A., Tenzin P., Topham K., Venkataraman V., Wen G., Yamazaki S., Young S.K., Zeng Q., Zimmer A.R., Rosenthal A., Birren B.W., Platzer M., Shimizu N., Lander E.S.
      Nature 439:331-335(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    3. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiE5RHU3_HUMAN
    AccessioniPrimary (citable) accession number: E5RHU3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 8, 2011
    Last sequence update: June 26, 2013
    Last modified: October 1, 2014
    This is version 28 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3