E5AQK8 (E5AQK8_BURRH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Pseudouridine synthase RuleBase RU003886
EC=5.4.99.- RuleBase RU003886

Gene names

Ordered Locus Names:

RBRH_03713 EMBL CBW74890.1

Organism

Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454) [Complete proteome] [HAMAP]

Taxonomic identifier

882378 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia rhizoxinica

Protein attributes

Sequence length	373 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pseudouridine synthase rluA family. RuleBase RU004243

Ontologies

Keywords
Molecular function	Isomerase RuleBase RU003886 Lyase EMBL CBW74890.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pseudouridine synthesis Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro lyase activity Inferred from electronic annotation. Source: UniProtKB-KW pseudouridine synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E5AQK8 [UniParc]. Last modified February 8, 2011. Version 1. Checksum: 1DD6B636E090A26A	FASTA	373	40,489
	10 20 30 40 50 60 MTRSNDRPNA GVDPHDYSPS VSPARPDEQV ARVPPALAGE RLDKVLARLF PTFSRSRLQT 70 80 90 100 110 120 WIDAGRVTLD GAPARLRQSV PLGATVRLVP DLLPQALAFA PEPVPLPIVY EDETLVVIDK 130 140 150 160 170 180 PAGLVVHPAA GNWSGTLLNG LLHRYPDAAG LPRAGIVHRL DKDTSGLMVV ARTLAAQTDL 190 200 210 220 230 240 VRQLQARTVK RRYIAFAWGV TPPSGCIDAP IGRDPRERTR MAVLAGAAGK AARTHFKTVA 250 260 270 280 290 300 TGVWSGQPVS RLLCDLETGR THQIRVHLAH TGHPLLGDPL YGRVRNARQR PALPAGFARQ 310 320 330 340 350 360 ALHAWRLALV HPATHAPVAW RSAMPQDLAQ LAAVLELTDP PDDQAETIDF ARQHAYDDEG 370 GSIVADDEED EFE

References

[1]

"Complete genome sequence of Burkholderia rhizoxinica, an Endosymbiont of Rhizopus microsporus." Lackner G., Moebius N., Partida-Martinez L., Hertweck C. J. Bacteriol. 193:783-784(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 19002 / CIP 109453 / HKI 454.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FR687359 Genomic DNA. Translation: CBW74890.1.
RefSeq	YP_004029034.1. NC_014722.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CBW74890; CBW74890; RBRH_03713.
GeneID	9987725.
KEGG	brh:RBRH_03713.
PATRIC	45184510. VBIBurRhi170666_2046.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000275919.
KO	K06180.
Enzyme and pathway databases
BioCyc	BRHI882378:GJIB-1410-MONOMER.
Family and domain databases
Gene3D	3.10.290.10. 1 hit.
InterPro	IPR020103. PsdUridine_synth_cat_dom. IPR006225. PsdUridine_synth_RluC/D. IPR006224. PsdUridine_synth_RluC/D_CS. IPR006145. PsdUridine_synth_RsuA/RluD. IPR002942. S4_RNA-bd. [Graphical view]
Pfam	PF00849. PseudoU_synth_2. 1 hit. PF01479. S4. 1 hit. [Graphical view]
SMART	SM00363. S4. 1 hit. [Graphical view]
SUPFAM	SSF55120. PsdUridine_synth_cat_dom. 1 hit.
TIGRFAMs	TIGR00005. rluA_subfam. 1 hit.
PROSITE	PS01129. PSI_RLU. 1 hit. PS50889. S4. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E5AQK8_BURRH

Accession

Primary (citable) accession number: E5AQK8

Entry history

Integrated into UniProtKB/TrEMBL:	February 8, 2011
Last sequence update:	February 8, 2011
Last modified:	May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)