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E4WID1

- E4WID1_RHOE1

UniProt

E4WID1 - E4WID1_RHOE1

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Protein
Submitted name: Putative ATP-dependent DNA ligase
Gene
REQ_26630
Organism
Rhodococcus equi (strain 103S) (Corynebacterium equi)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciREQU685727:GHKP-2566-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:REQ_26630Imported
OrganismiRhodococcus equi (strain 103S) (Corynebacterium equi)Imported
Taxonomic identifieri685727 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeRhodococcus
ProteomesiUP000006892: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OMAiVEVKYGQ.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E4WID1-1 [UniParc]FASTAAdd to Basket

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MSAAPTPPAP MLATLGKPPA GEGWAFEMKW DGQRAVTDVR DGGVRLFSRN    50
GNDITTAFPE LTGPIAEAVD DHAVVLDGEI VALDAKGRPS FGRLQRRMHV 100
ARPTTQLRND FPVIYYAFDV LALDGESTIG RTYLERRRML DDLRISGRQV 150
QVPPFWTGVD GHRMLDLARE HHLEGVVAKR VDSTYRPGRR APEWIKTPLR 200
KNTEAVVVGW VDGSGAARHG VGSLLLGAYD DDGRLVYIGH VGTGFTTALR 250
RSLREQLATL ERPASPLAAP PPSRDAKDAH WVEPQLVGDV EYREYTGGSL 300
RHPSWKGLRD DKTPAEVDLP GRH 323
Length:323
Mass (Da):35,612
Last modified:February 8, 2011 - v1
Checksum:iD8208804CE11A347
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FN563149 Genomic DNA. Translation: CBH48688.1.
RefSeqiYP_004007369.1. NC_014659.1.

Genome annotation databases

EnsemblBacteriaiCBH48688; CBH48688; REQ_26630.
GeneIDi9965230.
KEGGireq:REQ_26630.
PATRICi42662761. VBIRhoEqu141084_2659.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FN563149 Genomic DNA. Translation: CBH48688.1 .
RefSeqi YP_004007369.1. NC_014659.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBH48688 ; CBH48688 ; REQ_26630 .
GeneIDi 9965230.
KEGGi req:REQ_26630.
PATRICi 42662761. VBIRhoEqu141084_2659.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.
OMAi VEVKYGQ.

Enzyme and pathway databases

BioCyci REQU685727:GHKP-2566-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 103S.

Entry informationi

Entry nameiE4WID1_RHOE1
AccessioniPrimary (citable) accession number: E4WID1
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: October 16, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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