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E4WID1

- E4WID1_RHOE1

UniProt

E4WID1 - E4WID1_RHOE1

Protein
Submitted name:

Putative ATP-dependent DNA ligase

Gene

REQ_26630

Organism
Rhodococcus equi (strain 103S) (Corynebacterium equi)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (08 Feb 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciREQU685727:GHKP-2566-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative ATP-dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:REQ_26630Imported
    OrganismiRhodococcus equi (strain 103S) (Corynebacterium equi)Imported
    Taxonomic identifieri685727 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeRhodococcus
    ProteomesiUP000006892: Chromosome

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiVEVKYGQ.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E4WID1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSAAPTPPAP MLATLGKPPA GEGWAFEMKW DGQRAVTDVR DGGVRLFSRN    50
    GNDITTAFPE LTGPIAEAVD DHAVVLDGEI VALDAKGRPS FGRLQRRMHV 100
    ARPTTQLRND FPVIYYAFDV LALDGESTIG RTYLERRRML DDLRISGRQV 150
    QVPPFWTGVD GHRMLDLARE HHLEGVVAKR VDSTYRPGRR APEWIKTPLR 200
    KNTEAVVVGW VDGSGAARHG VGSLLLGAYD DDGRLVYIGH VGTGFTTALR 250
    RSLREQLATL ERPASPLAAP PPSRDAKDAH WVEPQLVGDV EYREYTGGSL 300
    RHPSWKGLRD DKTPAEVDLP GRH 323
    Length:323
    Mass (Da):35,612
    Last modified:February 8, 2011 - v1
    Checksum:iD8208804CE11A347
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN563149 Genomic DNA. Translation: CBH48688.1.
    RefSeqiYP_004007369.1. NC_014659.1.

    Genome annotation databases

    EnsemblBacteriaiCBH48688; CBH48688; REQ_26630.
    GeneIDi9965230.
    KEGGireq:REQ_26630.
    PATRICi42662761. VBIRhoEqu141084_2659.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN563149 Genomic DNA. Translation: CBH48688.1 .
    RefSeqi YP_004007369.1. NC_014659.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBH48688 ; CBH48688 ; REQ_26630 .
    GeneIDi 9965230.
    KEGGi req:REQ_26630.
    PATRICi 42662761. VBIRhoEqu141084_2659.

    Phylogenomic databases

    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi VEVKYGQ.

    Enzyme and pathway databases

    BioCyci REQU685727:GHKP-2566-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 103SImported.

    Entry informationi

    Entry nameiE4WID1_RHOE1
    AccessioniPrimary (citable) accession number: E4WID1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 8, 2011
    Last sequence update: February 8, 2011
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3