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E4WID1

- E4WID1_RHOE1

UniProt

E4WID1 - E4WID1_RHOE1

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Protein
Submitted name:

Putative ATP-dependent DNA ligase

Gene

REQ_26630

Organism
Rhodococcus equi (strain 103S) (Corynebacterium equi)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciREQU685727:GHKP-2566-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:REQ_26630Imported
OrganismiRhodococcus equi (strain 103S) (Corynebacterium equi)Imported
Taxonomic identifieri685727 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeRhodococcus
ProteomesiUP000006892: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OMAiVEVKYGQ.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E4WID1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSAAPTPPAP MLATLGKPPA GEGWAFEMKW DGQRAVTDVR DGGVRLFSRN
60 70 80 90 100
GNDITTAFPE LTGPIAEAVD DHAVVLDGEI VALDAKGRPS FGRLQRRMHV
110 120 130 140 150
ARPTTQLRND FPVIYYAFDV LALDGESTIG RTYLERRRML DDLRISGRQV
160 170 180 190 200
QVPPFWTGVD GHRMLDLARE HHLEGVVAKR VDSTYRPGRR APEWIKTPLR
210 220 230 240 250
KNTEAVVVGW VDGSGAARHG VGSLLLGAYD DDGRLVYIGH VGTGFTTALR
260 270 280 290 300
RSLREQLATL ERPASPLAAP PPSRDAKDAH WVEPQLVGDV EYREYTGGSL
310 320
RHPSWKGLRD DKTPAEVDLP GRH
Length:323
Mass (Da):35,612
Last modified:February 8, 2011 - v1
Checksum:iD8208804CE11A347
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN563149 Genomic DNA. Translation: CBH48688.1.
RefSeqiWP_013416275.1. NC_014659.1.
YP_004007369.1. NC_014659.1.

Genome annotation databases

EnsemblBacteriaiCBH48688; CBH48688; REQ_26630.
GeneIDi9965230.
KEGGireq:REQ_26630.
PATRICi42662761. VBIRhoEqu141084_2659.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN563149 Genomic DNA. Translation: CBH48688.1 .
RefSeqi WP_013416275.1. NC_014659.1.
YP_004007369.1. NC_014659.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBH48688 ; CBH48688 ; REQ_26630 .
GeneIDi 9965230.
KEGGi req:REQ_26630.
PATRICi 42662761. VBIRhoEqu141084_2659.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.
OMAi VEVKYGQ.

Enzyme and pathway databases

BioCyci REQU685727:GHKP-2566-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 103SImported.

Entry informationi

Entry nameiE4WID1_RHOE1
AccessioniPrimary (citable) accession number: E4WID1
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: October 29, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3