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E4WE24 (E4WE24_RHOE1) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:REQ_10780 EMBL CBH47178.1
OrganismRhodococcus equi (strain 103S) (Corynebacterium equi) [Complete proteome] [HAMAP] EMBL CBH47178.1
Taxonomic identifier685727 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeRhodococcus

Protein attributes

Sequence length746 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
E4WE24 [UniParc].

Last modified February 8, 2011. Version 1.
Checksum: 5AB60441B72DB5AF

FASTA74682,267
        10         20         30         40         50         60 
MPTRTIDGRR VAVSRLDKVL YPATANGPAV TKGEVIDYYE AIAPAMLPHV VDRPVTRKRW 

        70         80         90        100        110        120 
PNGVDEPSFF EKNLAASAPD WLTRHAVHHK DRAVRYPVID SAAALVWIGQ QAALEVHVPQ 

       130        140        150        160        170        180 
WRFVDGEPGP ATRLVFDLDP GDGVGLAECA RVAAAVRDLV ASLGWTAYPV TSGSKGIHVY 

       190        200        210        220        230        240 
VPLDRTLAPG GASTVARKVA TSLEQLHPDL VTATMAKSVR AGRVFVDWSQ NNAAKTTIAP 

       250        260        270        280        290        300 
YSLRGRAAPT VAAPRTWDEL EDPGLRHLRF DEVLDRFRRD GDLIADLDPR MDALTEYRRK 

       310        320        330        340        350        360 
RDADRTPEPI PQTAAEGGEG NSFVIQEHHA RRLHYDFRLE RDGVMVSWAV PRGLPTSSKE 

       370        380        390        400        410        420 
NRLAVHTEDH PLEYASFAGS IPKGEYGGGT VSIWDAGTYE PEKWRDDEVI VRLSGQRAQG 

       430        440        450        460        470        480 
RYALIRTEGD QWLMHLMKDD GGATDLPRGL APMLATAGTL DGLEPEQWAF EGKWDGIRLI 

       490        500        510        520        530        540 
VEFDGTTVRL RGRAGNDVTE RYPALQALAA ALDGHRVVLD GEVVSLDSHG NTSFPALQAG 

       550        560        570        580        590        600 
GVPQFRAFDI LYLDGVSLLR KRYDDRRRIL DALAAATVGL DVPPQLTGSV ADVRAQSKDL 

       610        620        630        640        650        660 
EGVVAKRRDS IYLPGRRGTA WIKTKNWLTQ EVVIGGWRRG RGAREAGIGS LLLGVPDKAG 

       670        680        690        700        710        720 
LRYVGRVGTG FSERERERLI ELLGPLERES SPFAGEVPDV DRDTVWVTPS VVGEVRYRER 

       730        740 
TDAGRLRHPA WRGLRDDKSP DDVRIE 

« Hide

References

[1]"The genome of a pathogenic rhodococcus: cooptive virulence underpinned by key gene acquisitions."
Letek M., Gonzalez P., Macarthur I., Rodriguez H., Freeman T.C., Valero-Rello A., Blanco M., Buckley T., Cherevach I., Fahey R., Hapeshi A., Holdstock J., Leadon D., Navas J., Ocampo A., Quail M.A., Sanders M., Scortti M.M. expand/collapse author list , Prescott J.F., Fogarty U., Meijer W.G., Parkhill J., Bentley S.D., Vazquez-Boland J.A.
PLoS Genet. 6:E1001145-E1001145(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 103S.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN563149 Genomic DNA. Translation: CBH47178.1.
RefSeqYP_004005863.1. NC_014659.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBH47178; CBH47178; REQ_10780.
GeneID9963974.
KEGGreq:REQ_10780.
PATRIC42659553. VBIRhoEqu141084_1076.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000222509.
KOK01971.
OMASKGIHLY.

Enzyme and pathway databases

BioCycREQU685727:GHKP-1039-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE4WE24_RHOE1
AccessionPrimary (citable) accession number: E4WE24
Entry history
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: April 16, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)