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E4WE24

- E4WE24_RHOE1

UniProt

E4WE24 - E4WE24_RHOE1

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Protein
Submitted name:

Putative ATP-dependent DNA ligase

Gene
REQ_10780
Organism
Rhodococcus equi (strain 103S) (Corynebacterium equi)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciREQU685727:GHKP-1039-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:REQ_10780Imported
OrganismiRhodococcus equi (strain 103S) (Corynebacterium equi)Imported
Taxonomic identifieri685727 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeRhodococcus
ProteomesiUP000006892: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OMAiSKGIHLY.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E4WE24-1 [UniParc]FASTAAdd to Basket

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MPTRTIDGRR VAVSRLDKVL YPATANGPAV TKGEVIDYYE AIAPAMLPHV    50
VDRPVTRKRW PNGVDEPSFF EKNLAASAPD WLTRHAVHHK DRAVRYPVID 100
SAAALVWIGQ QAALEVHVPQ WRFVDGEPGP ATRLVFDLDP GDGVGLAECA 150
RVAAAVRDLV ASLGWTAYPV TSGSKGIHVY VPLDRTLAPG GASTVARKVA 200
TSLEQLHPDL VTATMAKSVR AGRVFVDWSQ NNAAKTTIAP YSLRGRAAPT 250
VAAPRTWDEL EDPGLRHLRF DEVLDRFRRD GDLIADLDPR MDALTEYRRK 300
RDADRTPEPI PQTAAEGGEG NSFVIQEHHA RRLHYDFRLE RDGVMVSWAV 350
PRGLPTSSKE NRLAVHTEDH PLEYASFAGS IPKGEYGGGT VSIWDAGTYE 400
PEKWRDDEVI VRLSGQRAQG RYALIRTEGD QWLMHLMKDD GGATDLPRGL 450
APMLATAGTL DGLEPEQWAF EGKWDGIRLI VEFDGTTVRL RGRAGNDVTE 500
RYPALQALAA ALDGHRVVLD GEVVSLDSHG NTSFPALQAG GVPQFRAFDI 550
LYLDGVSLLR KRYDDRRRIL DALAAATVGL DVPPQLTGSV ADVRAQSKDL 600
EGVVAKRRDS IYLPGRRGTA WIKTKNWLTQ EVVIGGWRRG RGAREAGIGS 650
LLLGVPDKAG LRYVGRVGTG FSERERERLI ELLGPLERES SPFAGEVPDV 700
DRDTVWVTPS VVGEVRYRER TDAGRLRHPA WRGLRDDKSP DDVRIE 746
Length:746
Mass (Da):82,267
Last modified:February 8, 2011 - v1
Checksum:i5AB60441B72DB5AF
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FN563149 Genomic DNA. Translation: CBH47178.1.
RefSeqiYP_004005863.1. NC_014659.1.

Genome annotation databases

EnsemblBacteriaiCBH47178; CBH47178; REQ_10780.
GeneIDi9963974.
KEGGireq:REQ_10780.
PATRICi42659553. VBIRhoEqu141084_1076.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FN563149 Genomic DNA. Translation: CBH47178.1 .
RefSeqi YP_004005863.1. NC_014659.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBH47178 ; CBH47178 ; REQ_10780 .
GeneIDi 9963974.
KEGGi req:REQ_10780.
PATRICi 42659553. VBIRhoEqu141084_1076.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.
OMAi SKGIHLY.

Enzyme and pathway databases

BioCyci REQU685727:GHKP-1039-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 103S.

Entry informationi

Entry nameiE4WE24_RHOE1
AccessioniPrimary (citable) accession number: E4WE24
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: April 16, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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