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E4WE24

- E4WE24_RHOE1

UniProt

E4WE24 - E4WE24_RHOE1

Protein
Submitted name:

Putative ATP-dependent DNA ligase

Gene

REQ_10780

Organism
Rhodococcus equi (strain 103S) (Corynebacterium equi)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 21 (01 Oct 2014)
      Sequence version 1 (08 Feb 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciREQU685727:GHKP-1039-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative ATP-dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:REQ_10780Imported
    OrganismiRhodococcus equi (strain 103S) (Corynebacterium equi)Imported
    Taxonomic identifieri685727 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeNocardiaceaeRhodococcus
    ProteomesiUP000006892: Chromosome

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiSKGIHLY.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E4WE24-1 [UniParc]FASTAAdd to Basket

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    MPTRTIDGRR VAVSRLDKVL YPATANGPAV TKGEVIDYYE AIAPAMLPHV    50
    VDRPVTRKRW PNGVDEPSFF EKNLAASAPD WLTRHAVHHK DRAVRYPVID 100
    SAAALVWIGQ QAALEVHVPQ WRFVDGEPGP ATRLVFDLDP GDGVGLAECA 150
    RVAAAVRDLV ASLGWTAYPV TSGSKGIHVY VPLDRTLAPG GASTVARKVA 200
    TSLEQLHPDL VTATMAKSVR AGRVFVDWSQ NNAAKTTIAP YSLRGRAAPT 250
    VAAPRTWDEL EDPGLRHLRF DEVLDRFRRD GDLIADLDPR MDALTEYRRK 300
    RDADRTPEPI PQTAAEGGEG NSFVIQEHHA RRLHYDFRLE RDGVMVSWAV 350
    PRGLPTSSKE NRLAVHTEDH PLEYASFAGS IPKGEYGGGT VSIWDAGTYE 400
    PEKWRDDEVI VRLSGQRAQG RYALIRTEGD QWLMHLMKDD GGATDLPRGL 450
    APMLATAGTL DGLEPEQWAF EGKWDGIRLI VEFDGTTVRL RGRAGNDVTE 500
    RYPALQALAA ALDGHRVVLD GEVVSLDSHG NTSFPALQAG GVPQFRAFDI 550
    LYLDGVSLLR KRYDDRRRIL DALAAATVGL DVPPQLTGSV ADVRAQSKDL 600
    EGVVAKRRDS IYLPGRRGTA WIKTKNWLTQ EVVIGGWRRG RGAREAGIGS 650
    LLLGVPDKAG LRYVGRVGTG FSERERERLI ELLGPLERES SPFAGEVPDV 700
    DRDTVWVTPS VVGEVRYRER TDAGRLRHPA WRGLRDDKSP DDVRIE 746
    Length:746
    Mass (Da):82,267
    Last modified:February 8, 2011 - v1
    Checksum:i5AB60441B72DB5AF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN563149 Genomic DNA. Translation: CBH47178.1.
    RefSeqiYP_004005863.1. NC_014659.1.

    Genome annotation databases

    EnsemblBacteriaiCBH47178; CBH47178; REQ_10780.
    GeneIDi9963974.
    KEGGireq:REQ_10780.
    PATRICi42659553. VBIRhoEqu141084_1076.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN563149 Genomic DNA. Translation: CBH47178.1 .
    RefSeqi YP_004005863.1. NC_014659.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBH47178 ; CBH47178 ; REQ_10780 .
    GeneIDi 9963974.
    KEGGi req:REQ_10780.
    PATRICi 42659553. VBIRhoEqu141084_1076.

    Phylogenomic databases

    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi SKGIHLY.

    Enzyme and pathway databases

    BioCyci REQU685727:GHKP-1039-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 103SImported.

    Entry informationi

    Entry nameiE4WE24_RHOE1
    AccessioniPrimary (citable) accession number: E4WE24
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 8, 2011
    Last sequence update: February 8, 2011
    Last modified: October 1, 2014
    This is version 21 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3