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Protein
Submitted name:

Putative ATP-dependent DNA ligase

Gene

REQ_10780

Organism
Rhodococcus hoagii (strain 103S) (Rhodococcus equi)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciREQU685727:G1GVL-1057-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:REQ_10780Imported
OrganismiRhodococcus hoagii (strain 103S) (Rhodococcus equi)Imported
Taxonomic identifieri685727 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesNocardiaceaeRhodococcus
Proteomesi
  • UP000006892 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi685727.REQ_10780

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini545 – 657DNA_LIGASE_A3InterPro annotationAdd BLAST113

Phylogenomic databases

eggNOGiENOG4105DQE Bacteria
COG1793 LUCA
COG3285 LUCA
HOGENOMiHOG000222509
KOiK01971
OrthoDBiPOG091H0AZ9

Family and domain databases

CDDicd04863 MtLigD_Pol_like, 1 hit
InterProiView protein in InterPro
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR014146 LigD_ligase_dom
IPR014144 LigD_PE_domain
IPR014145 LigD_pol_dom
IPR033649 MtLigD_Pol-like
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF13298 LigD_N, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR02777 LigD_PE_dom, 1 hit
TIGR02778 ligD_pol, 1 hit
TIGR02779 NHEJ_ligase_lig, 1 hit
PROSITEiView protein in PROSITE
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

E4WE24-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPTRTIDGRR VAVSRLDKVL YPATANGPAV TKGEVIDYYE AIAPAMLPHV
60 70 80 90 100
VDRPVTRKRW PNGVDEPSFF EKNLAASAPD WLTRHAVHHK DRAVRYPVID
110 120 130 140 150
SAAALVWIGQ QAALEVHVPQ WRFVDGEPGP ATRLVFDLDP GDGVGLAECA
160 170 180 190 200
RVAAAVRDLV ASLGWTAYPV TSGSKGIHVY VPLDRTLAPG GASTVARKVA
210 220 230 240 250
TSLEQLHPDL VTATMAKSVR AGRVFVDWSQ NNAAKTTIAP YSLRGRAAPT
260 270 280 290 300
VAAPRTWDEL EDPGLRHLRF DEVLDRFRRD GDLIADLDPR MDALTEYRRK
310 320 330 340 350
RDADRTPEPI PQTAAEGGEG NSFVIQEHHA RRLHYDFRLE RDGVMVSWAV
360 370 380 390 400
PRGLPTSSKE NRLAVHTEDH PLEYASFAGS IPKGEYGGGT VSIWDAGTYE
410 420 430 440 450
PEKWRDDEVI VRLSGQRAQG RYALIRTEGD QWLMHLMKDD GGATDLPRGL
460 470 480 490 500
APMLATAGTL DGLEPEQWAF EGKWDGIRLI VEFDGTTVRL RGRAGNDVTE
510 520 530 540 550
RYPALQALAA ALDGHRVVLD GEVVSLDSHG NTSFPALQAG GVPQFRAFDI
560 570 580 590 600
LYLDGVSLLR KRYDDRRRIL DALAAATVGL DVPPQLTGSV ADVRAQSKDL
610 620 630 640 650
EGVVAKRRDS IYLPGRRGTA WIKTKNWLTQ EVVIGGWRRG RGAREAGIGS
660 670 680 690 700
LLLGVPDKAG LRYVGRVGTG FSERERERLI ELLGPLERES SPFAGEVPDV
710 720 730 740
DRDTVWVTPS VVGEVRYRER TDAGRLRHPA WRGLRDDKSP DDVRIE
Length:746
Mass (Da):82,267
Last modified:February 8, 2011 - v1
Checksum:i5AB60441B72DB5AF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN563149 Genomic DNA Translation: CBH47178.1
RefSeqiWP_013415123.1, NC_014659.1

Genome annotation databases

EnsemblBacteriaiCBH47178; CBH47178; REQ_10780
GeneIDi32492768
KEGGireq:REQ_10780

Similar proteinsi

Entry informationi

Entry nameiE4WE24_RHOH1
AccessioniPrimary (citable) accession number: E4WE24
Entry historyiIntegrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: March 28, 2018
This is version 43 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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