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E4UDS5

- E4UDS5_LIBSC

UniProt

E4UDS5 - E4UDS5_LIBSC

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Protein

Elongation factor Tu

Gene
tuf, CKC_05020, CKC_05375
Organism
Liberibacter solanacearum (strain CLso-ZC1)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi19 – 268GTP By similarityUniRule annotation
Nucleotide bindingi77 – 815GTP By similarityUniRule annotation
Nucleotide bindingi132 – 1354GTP By similarityUniRule annotation

GO - Molecular functioni

  1. GTPase activity Source: InterPro
  2. GTP binding Source: UniProtKB-HAMAP
  3. translation elongation factor activity Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotationImported

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciLSOL658172:GHHM-1051-MONOMER.
LSOL658172:GHHM-1122-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Short name:
EF-TuUniRule annotation
Gene namesi
Name:tufUniRule annotation
Ordered Locus Names:CKC_05020Imported, CKC_05375Imported
OrganismiLiberibacter solanacearum (strain CLso-ZC1)Imported
Taxonomic identifieri658172 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeCandidatus Liberibacter
ProteomesiUP000007038: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000229290.
KOiK02358.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E4UDS5-1 [UniParc]FASTAAdd to Basket

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MAEKRFIRDK ESLGISTIGH VDHGKTTLTA AITKYYSDEQ KAYGEIDSAP    50
EERVRGITIS TAHVHYQTAK RFYGHIDCPG HADYVKNMIT GATQADGAIL 100
VCSAYDGPKP QTKEHILLAR QVGISSIVVY MNKVDTVDDP ELLDLVELEI 150
RELLSYYDFP GDEVPVIRGS ALCALNGENK ELGEDSIHAL MEAVDNYIPT 200
PSRLTDEPFL MHVESSCTIG GRGTVATGRV KRGKLVAGSD IEIIGMGGKT 250
LKAKCTDMEM FRQKLDEAIA GDNVGLLLRG VDRADVQRGR VICAPGSIKE 300
YSKFEASVYI LKKEEGGRHT GFLGNYRPQF FMDTADVTGK IILPPESKAV 350
MPGDRVTLEI ELISPIAMEA NQRFSIREGG KTIGAGIVSK IIG 393
Length:393
Mass (Da):42,896
Last modified:February 8, 2011 - v1
Checksum:iA523F9DC4FF6C0D8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002371 Genomic DNA. Translation: ADR52753.1.
CP002371 Genomic DNA. Translation: ADR52821.1.
RefSeqiYP_004063241.1. NC_014774.1.
YP_004063309.1. NC_014774.1.

Genome annotation databases

EnsemblBacteriaiADR52753; ADR52753; CKC_05020.
ADR52821; ADR52821; CKC_05375.
GeneIDi10034391.
10034462.
KEGGilso:CKC_05020.
lso:CKC_05375.
PATRICi45199521. VBICanLib97138_1011.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002371 Genomic DNA. Translation: ADR52753.1 .
CP002371 Genomic DNA. Translation: ADR52821.1 .
RefSeqi YP_004063241.1. NC_014774.1.
YP_004063309.1. NC_014774.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADR52753 ; ADR52753 ; CKC_05020 .
ADR52821 ; ADR52821 ; CKC_05375 .
GeneIDi 10034391.
10034462.
KEGGi lso:CKC_05020.
lso:CKC_05375.
PATRICi 45199521. VBICanLib97138_1011.

Phylogenomic databases

HOGENOMi HOG000229290.
KOi K02358.

Enzyme and pathway databases

BioCyci LSOL658172:GHHM-1051-MONOMER.
LSOL658172:GHHM-1122-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00118_B. EF_Tu_B.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEi PS00301. EFACTOR_GTP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of Candidatus Liberibacter solanacearum CLso-ZC1."
    Lin H., Doddapaneni H.V., Lou B., Civerolo E.L., Chen C., Duan Y., Zhou L., Glynn J.
    Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CLso-ZC1.
  2. Lin H., Doddapaneni H.V., Lou B., Civerolo E.L., Chen C., Duan Y., Zhou L., Glynn J.
    Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CLso-ZC1.
  3. "The Complete Genome Sequence of 'Candidatus Liberibacter solanacearum', the Bacterium Associated with Potato Zebra Chip Disease."
    Lin H., Lou B., Glynn J.M., Doddapaneni H., Civerolo E.L., Chen C., Duan Y., Zhou L., Vahling C.M.
    PLoS ONE 6:E19135-E19135(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CLso-ZC1Imported.

Entry informationi

Entry nameiE4UDS5_LIBSC
AccessioniPrimary (citable) accession number: E4UDS5
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: June 11, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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