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E4UDS5

- E4UDS5_LIBSC

UniProt

E4UDS5 - E4UDS5_LIBSC

Protein

Elongation factor Tu

Gene

tuf

Organism
Liberibacter solanacearum (strain CLso-ZC1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 1 (08 Feb 2011)
      Previous versions | rss
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    Functioni

    This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi19 – 268GTPUniRule annotation
    Nucleotide bindingi77 – 815GTPUniRule annotation
    Nucleotide bindingi132 – 1354GTPUniRule annotation

    GO - Molecular functioni

    1. GTPase activity Source: InterPro
    2. GTP binding Source: UniProtKB-HAMAP
    3. translation elongation factor activity Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Elongation factorUniRule annotationImported

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    GTP-bindingUniRule annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciLSOL658172:GHHM-1051-MONOMER.
    LSOL658172:GHHM-1122-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Elongation factor TuUniRule annotation
    Short name:
    EF-TuUniRule annotation
    Gene namesi
    Name:tufUniRule annotation
    Ordered Locus Names:CKC_05020Imported, CKC_05375Imported
    OrganismiLiberibacter solanacearum (strain CLso-ZC1)Imported
    Taxonomic identifieri658172 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeCandidatus Liberibacter
    ProteomesiUP000007038: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotation

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily.UniRule annotation
    Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000229290.
    KOiK02358.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    HAMAPiMF_00118_B. EF_Tu_B.
    InterProiIPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view]
    PfamiPF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view]
    PRINTSiPR00315. ELONGATNFCT.
    SUPFAMiSSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEiPS00301. EFACTOR_GTP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E4UDS5-1 [UniParc]FASTAAdd to Basket

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    MAEKRFIRDK ESLGISTIGH VDHGKTTLTA AITKYYSDEQ KAYGEIDSAP    50
    EERVRGITIS TAHVHYQTAK RFYGHIDCPG HADYVKNMIT GATQADGAIL 100
    VCSAYDGPKP QTKEHILLAR QVGISSIVVY MNKVDTVDDP ELLDLVELEI 150
    RELLSYYDFP GDEVPVIRGS ALCALNGENK ELGEDSIHAL MEAVDNYIPT 200
    PSRLTDEPFL MHVESSCTIG GRGTVATGRV KRGKLVAGSD IEIIGMGGKT 250
    LKAKCTDMEM FRQKLDEAIA GDNVGLLLRG VDRADVQRGR VICAPGSIKE 300
    YSKFEASVYI LKKEEGGRHT GFLGNYRPQF FMDTADVTGK IILPPESKAV 350
    MPGDRVTLEI ELISPIAMEA NQRFSIREGG KTIGAGIVSK IIG 393
    Length:393
    Mass (Da):42,896
    Last modified:February 8, 2011 - v1
    Checksum:iA523F9DC4FF6C0D8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002371 Genomic DNA. Translation: ADR52753.1.
    CP002371 Genomic DNA. Translation: ADR52821.1.
    RefSeqiYP_004063241.1. NC_014774.1.
    YP_004063309.1. NC_014774.1.

    Genome annotation databases

    EnsemblBacteriaiADR52753; ADR52753; CKC_05020.
    ADR52821; ADR52821; CKC_05375.
    GeneIDi10034391.
    10034462.
    KEGGilso:CKC_05020.
    lso:CKC_05375.
    PATRICi45199521. VBICanLib97138_1011.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002371 Genomic DNA. Translation: ADR52753.1 .
    CP002371 Genomic DNA. Translation: ADR52821.1 .
    RefSeqi YP_004063241.1. NC_014774.1.
    YP_004063309.1. NC_014774.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADR52753 ; ADR52753 ; CKC_05020 .
    ADR52821 ; ADR52821 ; CKC_05375 .
    GeneIDi 10034391.
    10034462.
    KEGGi lso:CKC_05020.
    lso:CKC_05375.
    PATRICi 45199521. VBICanLib97138_1011.

    Phylogenomic databases

    HOGENOMi HOG000229290.
    KOi K02358.

    Enzyme and pathway databases

    BioCyci LSOL658172:GHHM-1051-MONOMER.
    LSOL658172:GHHM-1122-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    HAMAPi MF_00118_B. EF_Tu_B.
    InterProi IPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view ]
    Pfami PF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view ]
    PRINTSi PR00315. ELONGATNFCT.
    SUPFAMi SSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEi PS00301. EFACTOR_GTP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Candidatus Liberibacter solanacearum CLso-ZC1."
      Lin H., Doddapaneni H.V., Lou B., Civerolo E.L., Chen C., Duan Y., Zhou L., Glynn J.
      Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CLso-ZC1Imported.
    2. Lin H., Doddapaneni H.V., Lou B., Civerolo E.L., Chen C., Duan Y., Zhou L., Glynn J.
      Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: CLso-ZC1.
    3. "The Complete Genome Sequence of 'Candidatus Liberibacter solanacearum', the Bacterium Associated with Potato Zebra Chip Disease."
      Lin H., Lou B., Glynn J.M., Doddapaneni H., Civerolo E.L., Chen C., Duan Y., Zhou L., Vahling C.M.
      PLoS ONE 6:E19135-E19135(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: CLso-ZC1Imported.

    Entry informationi

    Entry nameiE4UDS5_LIBSC
    AccessioniPrimary (citable) accession number: E4UDS5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 8, 2011
    Last sequence update: February 8, 2011
    Last modified: October 1, 2014
    This is version 26 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3