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E4TTM0

- E4TTM0_MARTH

UniProt

E4TTM0 - E4TTM0_MARTH

Protein
Submitted name:

D-alanine--D-alanine ligase

Gene

Ftrac_0935

Organism
Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter tractuosus)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 1 (08 Feb 2011)
      Previous versions | rss
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    Functioni

    Cell wall formation.SAAS annotation

    Catalytic activityi

    ATP + 2 D-alanine = ADP + phosphate + D-alanyl-D-alanine.SAAS annotation

    Cofactori

    Binds 2 magnesium or manganese ions per subunit.SAAS annotation

    Pathwayi

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. D-alanine-D-alanine ligase activity Source: UniProtKB-EC
    3. metal ion binding Source: UniProtKB-KW

    GO - Biological processi

    1. peptidoglycan biosynthetic process Source: UniProtKB-UniPathway
    2. regulation of cell shape Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseSAAS annotationImported

    Keywords - Biological processi

    Cell shape, Cell wall biogenesis/degradationSAAS annotation, Peptidoglycan synthesisSAAS annotation

    Keywords - Ligandi

    ATP-bindingSAAS annotation, MagnesiumSAAS annotation, ManganeseSAAS annotation, Metal-bindingSAAS annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciMTRA643867:GI2X-951-MONOMER.
    UniPathwayiUPA00219.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    D-alanine--D-alanine ligaseImported (EC:6.3.2.4Imported)
    Gene namesi
    Ordered Locus Names:Ftrac_0935Imported
    OrganismiMarivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter tractuosus)Imported
    Taxonomic identifieri643867 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesFlammeovirgaceaeMarivirga
    ProteomesiUP000008720: Chromosome

    Subcellular locationi

    Cytoplasm SAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmSAAS annotation

    Family & Domainsi

    Sequence similaritiesi

    Contains ATP-grasp domain.SAAS annotation

    Phylogenomic databases

    HOGENOMiHOG000121145.
    KOiK01921.

    Family and domain databases

    Gene3Di3.30.1490.20. 2 hits.
    3.30.470.20. 2 hits.
    3.40.50.20. 2 hits.
    HAMAPiMF_00047. Dala_Dala_lig.
    InterProiIPR011761. ATP-grasp.
    IPR013815. ATP_grasp_subdomain_1.
    IPR013816. ATP_grasp_subdomain_2.
    IPR000291. D-Ala_lig_Van_CS.
    IPR005905. D_ala_D_ala.
    IPR011095. Dala_Dala_lig_C.
    IPR011127. Dala_Dala_lig_N.
    IPR016185. PreATP-grasp_dom.
    [Graphical view]
    PANTHERiPTHR23132. PTHR23132. 1 hit.
    PfamiPF07478. Dala_Dala_lig_C. 3 hits.
    PF01820. Dala_Dala_lig_N. 2 hits.
    [Graphical view]
    SUPFAMiSSF52440. SSF52440. 2 hits.
    PROSITEiPS50975. ATP_GRASP. 2 hits.
    PS00843. DALA_DALA_LIGASE_1. 2 hits.
    PS00844. DALA_DALA_LIGASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E4TTM0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRIGIFFGGQ SREREISFAG GRTVYDNLNK SIFDAVPIFI DSKGHFVLLD    50
    WQYIYKGTIR DFYPPVNFLP KSDLPVQIYA ESLKNLSDED WDKLIAEVGQ 100
    KINPSDFKKH IDFAFLALHG PYGEDGNIQG ILEWNGIPFS GAGILPSAIG 150
    ISKIAQRQFL QQAGFEGPKS RILNQNDWNH QPHENIYQNL KKELGLPLVI 200
    KAPHQGSSIG VSILNEDDPN KFEKLVQKSF FELEITEDEW NGYSQEEKIG 250
    FIAKLVDIRE GIGLPVIAEE GMLYTPDELL EFLNNTFTAK KQSIKLKAID 300
    SENSLLIESF IEGKEFSCIV IQDENERPIA LPPTEIRKGK DVFDYRSKYL 350
    PGISRKITPI DAPQDIIEKI RSQCAALFKA LQIDVYARID GFITKEGKVF 400
    LNDPNTTSGM LPSSFFFHQA AEIGLNPSQF LSYIIRTSLQ ARLKTGKHHF 450
    ELQKMIKQLD AALEGLKKEA QKKINVGVIM GGFSTERHIS VESGRNIYEK 500
    LSSSEKYLPI PIFLSGNEDQ HELYVLPINI MLKDNADDIK DKIQNYEVHP 550
    IISQIKFESS EITEKYVGIE NIVLKKISYH DLPDIIDVTF IALHGRPGED 600
    GAVQAELEKL NIPYNGSDVE SSKITINKYD TNEILKNAGI SVADHRLVFE 650
    NKWQSNKEAE IAAIEEQLSY PLIAKPADDG CSSAVKKIKN KAELEAFAGM 700
    MFRPQAEFIE DLANILKLKK NEEFPQKNFF LLEELIEKKD AKYFLEITGG 750
    LLTHFKEDGS IEYEIFEPSE ALAGGEVLSL EEKFLAGEGQ NITPARYTPQ 800
    AENYKVVAEQ VKATLKKTAE VLNITGYARI DAFVRVYEDL SVETIIIEVN 850
    SLPGMTPATC IFHQTAINGY KPYDFIDKIL AFGTEKMKKQ TITK 894
    Length:894
    Mass (Da):100,870
    Last modified:February 8, 2011 - v1
    Checksum:i4A199DC548908161
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002349 Genomic DNA. Translation: ADR20937.1.
    RefSeqiWP_013453088.1. NC_014759.1.
    YP_004053045.1. NC_014759.1.

    Genome annotation databases

    EnsemblBacteriaiADR20937; ADR20937; Ftrac_0935.
    GeneIDi10011067.
    KEGGimtt:Ftrac_0935.
    PATRICi45215113. VBIMarTra126157_0974.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002349 Genomic DNA. Translation: ADR20937.1 .
    RefSeqi WP_013453088.1. NC_014759.1.
    YP_004053045.1. NC_014759.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADR20937 ; ADR20937 ; Ftrac_0935 .
    GeneIDi 10011067.
    KEGGi mtt:Ftrac_0935.
    PATRICi 45215113. VBIMarTra126157_0974.

    Phylogenomic databases

    HOGENOMi HOG000121145.
    KOi K01921.

    Enzyme and pathway databases

    UniPathwayi UPA00219 .
    BioCyci MTRA643867:GI2X-951-MONOMER.

    Family and domain databases

    Gene3Di 3.30.1490.20. 2 hits.
    3.30.470.20. 2 hits.
    3.40.50.20. 2 hits.
    HAMAPi MF_00047. Dala_Dala_lig.
    InterProi IPR011761. ATP-grasp.
    IPR013815. ATP_grasp_subdomain_1.
    IPR013816. ATP_grasp_subdomain_2.
    IPR000291. D-Ala_lig_Van_CS.
    IPR005905. D_ala_D_ala.
    IPR011095. Dala_Dala_lig_C.
    IPR011127. Dala_Dala_lig_N.
    IPR016185. PreATP-grasp_dom.
    [Graphical view ]
    PANTHERi PTHR23132. PTHR23132. 1 hit.
    Pfami PF07478. Dala_Dala_lig_C. 3 hits.
    PF01820. Dala_Dala_lig_N. 2 hits.
    [Graphical view ]
    SUPFAMi SSF52440. SSF52440. 2 hits.
    PROSITEi PS50975. ATP_GRASP. 2 hits.
    PS00843. DALA_DALA_LIGASE_1. 2 hits.
    PS00844. DALA_DALA_LIGASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43Imported.

    Entry informationi

    Entry nameiE4TTM0_MARTH
    AccessioniPrimary (citable) accession number: E4TTM0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 8, 2011
    Last sequence update: February 8, 2011
    Last modified: October 1, 2014
    This is version 26 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3