E4TS21 (E4TS21_MARTH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ADR20772.1

Gene names

Ordered Locus Names:

Ftrac_0770 EMBL ADR20772.1

Organism

Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter tractuosus) [Complete proteome] [HAMAP] EMBL ADR20772.1

Taxonomic identifier

643867 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Cytophagia › Cytophagales › Flammeovirgaceae › Marivirga › Marivirga tractuosa

Protein attributes

Sequence length	533 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ADR20772.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E4TS21 [UniParc]. Last modified February 8, 2011. Version 1. Checksum: 165EDE93AE18BEB8	FASTA	533	61,868
	10 20 30 40 50 60 MKEFAQLITS LDQSNKTNDK VNALKNYFLS ANDQDKIWTL ALFTHRKPKR TVNTNLLKDW 70 80 90 100 110 120 VTEWTGIPEW LFQESYQVVG DLAETISLLV ASTDEGYKEV DNLLSYYIKT LISLRDKSIE 130 140 150 160 170 180 EKKKRLQSIY KELDPQERFV FTKIMTGGWR VGVSQNLITK ALSEAFDIDK SIIAHRLMGN 190 200 210 220 230 240 WSPENFTFQE LILEESKNDL ASRPYPFYLA HPIETQEIQE ELNPAEWQAE WKWDGIRGQI 250 260 270 280 290 300 IKRNDEVFIW SRGEELVTEK FPELVEMAEK LPNGAVLDGE ITAYRNGEPL SFGVLQTRIG 310 320 330 340 350 360 RKNITKNLIK KAPVVFICYD IIEHKGKDIR TKALSYRTQL LNQLLLEIDH PILLASQSIE 370 380 390 400 410 420 FSDWVELIEI RKKSRSLKTE GLMLKKKNSI YEAGRKRGSW WKWKIAPLTI DGVMIYAQKG 430 440 450 460 470 480 HGRRADLYSD YTLAVWNEDE LIPFAKAYSG LTDAEMKKVD AFVKKNTKEK FGPVRTVKPE 490 500 510 520 530 LVFEIAFEGI QVSNRHKSGI ALRFPRIKRW RQDKPISEAN KLTDLQHLLE KYG

References

[1]

"The complete genome of chromosome of Marivirga tractuosa DSM 4126." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Pagani I., Ivanova N., Ovchinnikova G., Chertkov O., Held B., Detter J.C., Han C., Tapia R., Land M., Hauser L. , Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Schroeder M., Schneider S., Klenk H.-P., Eisen J.A. Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002349 Genomic DNA. Translation: ADR20772.1.
RefSeq	YP_004052880.1. NC_014759.1.
3D structure databases
ProteinModelPortal	E4TS21.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADR20772; ADR20772; Ftrac_0770.
GeneID	10010898.
KEGG	mtt:Ftrac_0770.
PATRIC	45214769. VBIMarTra126157_0808.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000036007.
KO	K01971.
Enzyme and pathway databases
BioCyc	MTRA643867:GI2X-782-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit. SSF117018. SSF117018. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E4TS21_MARTH

Accession

Primary (citable) accession number: E4TS21

Entry history

Integrated into UniProtKB/TrEMBL:	February 8, 2011
Last sequence update:	February 8, 2011
Last modified:	May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)