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E4TS21

- E4TS21_MARTH

UniProt

E4TS21 - E4TS21_MARTH

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Ftrac_0770

Organism
Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter tractuosus)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (08 Feb 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMTRA643867:GI2X-782-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Ftrac_0770Imported
    OrganismiMarivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter tractuosus)Imported
    Taxonomic identifieri643867 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesFlammeovirgaceaeMarivirga
    ProteomesiUP000008720: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliE4TS21.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000036007.
    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E4TS21-1 [UniParc]FASTAAdd to Basket

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    MKEFAQLITS LDQSNKTNDK VNALKNYFLS ANDQDKIWTL ALFTHRKPKR    50
    TVNTNLLKDW VTEWTGIPEW LFQESYQVVG DLAETISLLV ASTDEGYKEV 100
    DNLLSYYIKT LISLRDKSIE EKKKRLQSIY KELDPQERFV FTKIMTGGWR 150
    VGVSQNLITK ALSEAFDIDK SIIAHRLMGN WSPENFTFQE LILEESKNDL 200
    ASRPYPFYLA HPIETQEIQE ELNPAEWQAE WKWDGIRGQI IKRNDEVFIW 250
    SRGEELVTEK FPELVEMAEK LPNGAVLDGE ITAYRNGEPL SFGVLQTRIG 300
    RKNITKNLIK KAPVVFICYD IIEHKGKDIR TKALSYRTQL LNQLLLEIDH 350
    PILLASQSIE FSDWVELIEI RKKSRSLKTE GLMLKKKNSI YEAGRKRGSW 400
    WKWKIAPLTI DGVMIYAQKG HGRRADLYSD YTLAVWNEDE LIPFAKAYSG 450
    LTDAEMKKVD AFVKKNTKEK FGPVRTVKPE LVFEIAFEGI QVSNRHKSGI 500
    ALRFPRIKRW RQDKPISEAN KLTDLQHLLE KYG 533
    Length:533
    Mass (Da):61,868
    Last modified:February 8, 2011 - v1
    Checksum:i165EDE93AE18BEB8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002349 Genomic DNA. Translation: ADR20772.1.
    RefSeqiYP_004052880.1. NC_014759.1.

    Genome annotation databases

    EnsemblBacteriaiADR20772; ADR20772; Ftrac_0770.
    GeneIDi10010898.
    KEGGimtt:Ftrac_0770.
    PATRICi45214769. VBIMarTra126157_0808.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002349 Genomic DNA. Translation: ADR20772.1 .
    RefSeqi YP_004052880.1. NC_014759.1.

    3D structure databases

    ProteinModelPortali E4TS21.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADR20772 ; ADR20772 ; Ftrac_0770 .
    GeneIDi 10010898.
    KEGGi mtt:Ftrac_0770.
    PATRICi 45214769. VBIMarTra126157_0808.

    Phylogenomic databases

    HOGENOMi HOG000036007.
    KOi K01971.

    Enzyme and pathway databases

    BioCyci MTRA643867:GI2X-782-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43Imported.

    Entry informationi

    Entry nameiE4TS21_MARTH
    AccessioniPrimary (citable) accession number: E4TS21
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 8, 2011
    Last sequence update: February 8, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3