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E4TS21

- E4TS21_MARTH

UniProt

E4TS21 - E4TS21_MARTH

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Protein
Submitted name:

ATP dependent DNA ligase

Gene
Ftrac_0770
Organism
Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter tractuosus)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMTRA643867:GI2X-782-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Ftrac_0770Imported
OrganismiMarivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter tractuosus)Imported
Taxonomic identifieri643867 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesFlammeovirgaceaeMarivirga
ProteomesiUP000008720: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE4TS21.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000036007.
KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E4TS21-1 [UniParc]FASTAAdd to Basket

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MKEFAQLITS LDQSNKTNDK VNALKNYFLS ANDQDKIWTL ALFTHRKPKR    50
TVNTNLLKDW VTEWTGIPEW LFQESYQVVG DLAETISLLV ASTDEGYKEV 100
DNLLSYYIKT LISLRDKSIE EKKKRLQSIY KELDPQERFV FTKIMTGGWR 150
VGVSQNLITK ALSEAFDIDK SIIAHRLMGN WSPENFTFQE LILEESKNDL 200
ASRPYPFYLA HPIETQEIQE ELNPAEWQAE WKWDGIRGQI IKRNDEVFIW 250
SRGEELVTEK FPELVEMAEK LPNGAVLDGE ITAYRNGEPL SFGVLQTRIG 300
RKNITKNLIK KAPVVFICYD IIEHKGKDIR TKALSYRTQL LNQLLLEIDH 350
PILLASQSIE FSDWVELIEI RKKSRSLKTE GLMLKKKNSI YEAGRKRGSW 400
WKWKIAPLTI DGVMIYAQKG HGRRADLYSD YTLAVWNEDE LIPFAKAYSG 450
LTDAEMKKVD AFVKKNTKEK FGPVRTVKPE LVFEIAFEGI QVSNRHKSGI 500
ALRFPRIKRW RQDKPISEAN KLTDLQHLLE KYG 533
Length:533
Mass (Da):61,868
Last modified:February 8, 2011 - v1
Checksum:i165EDE93AE18BEB8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002349 Genomic DNA. Translation: ADR20772.1.
RefSeqiYP_004052880.1. NC_014759.1.

Genome annotation databases

EnsemblBacteriaiADR20772; ADR20772; Ftrac_0770.
GeneIDi10010898.
KEGGimtt:Ftrac_0770.
PATRICi45214769. VBIMarTra126157_0808.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002349 Genomic DNA. Translation: ADR20772.1 .
RefSeqi YP_004052880.1. NC_014759.1.

3D structure databases

ProteinModelPortali E4TS21.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADR20772 ; ADR20772 ; Ftrac_0770 .
GeneIDi 10010898.
KEGGi mtt:Ftrac_0770.
PATRICi 45214769. VBIMarTra126157_0808.

Phylogenomic databases

HOGENOMi HOG000036007.
KOi K01971.

Enzyme and pathway databases

BioCyci MTRA643867:GI2X-782-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43.

Entry informationi

Entry nameiE4TS21_MARTH
AccessioniPrimary (citable) accession number: E4TS21
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: October 16, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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