6-phosphofructokinase precursor - Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1)

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E4TIZ2 (E4TIZ2_CALNY) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 18. History...

Clusters with 100%, 90%, 50% identity |

Third-party data

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Recommended name:
6-phosphofructokinase HAMAP-Rule MF_00339
Short name=Phosphofructokinase HAMAP-Rule MF_00339
EC=2.7.1.11 HAMAP-Rule MF_00339

Alternative name(s):
Phosphohexokinase HAMAP-Rule MF_00339

Gene names

Name:	pfkA HAMAP-Rule MF_00339
Ordered Locus Names:	Calni_1216 EMBL ADR19124.1

Organism

Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) [Complete proteome] [HAMAP] EMBL ADR19124.1

Taxonomic identifier

768670 [NCBI]

Taxonomic lineage

Bacteria › Deferribacteres › Deferribacterales › Deferribacteraceae ›

Protein attributes

Sequence length	320 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate. HAMAP-Rule MF_00339 SAAS SAAS012828
Pathway	Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 3/4. HAMAP-Rule MF_00339 SAAS SAAS012828
Subcellular location	Cytoplasm By similarity HAMAP-Rule MF_00339 SAAS SAAS012828.
Sequence similarities	Belongs to the phosphofructokinase family. HAMAP-Rule MF_00339

Ontologies

Keywords
Biological process	Glycolysis HAMAP-Rule MF_00339 SAAS SAAS012828
Cellular component	Cytoplasm HAMAP-Rule MF_00339 SAAS SAAS012828
Domain	Signal EMBL ADR19124.1
Ligand	ATP-binding RuleBase RU004092 HAMAP-Rule MF_00339 SAAS SAAS012828 Magnesium HAMAP-Rule MF_00339 SAAS SAAS012828 Metal-binding HAMAP-Rule MF_00339 SAAS SAAS012828 Nucleotide-binding
Molecular function	Kinase RuleBase RU004092 HAMAP-Rule MF_00339 SAAS SAAS012828 EMBL ADR19124.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	fructose 6-phosphate metabolic process Inferred from electronic annotation. Source: InterPro glycolysis Inferred from electronic annotation. Source: HAMAP
Cellular_component	6-phosphofructokinase complex Inferred from electronic annotation. Source: InterPro
Molecular_function	6-phosphofructokinase activity Inferred from electronic annotation. Source: HAMAP ATP binding Inferred from electronic annotation. Source: UniProtKB-KW metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Signal peptide

1 – 29

Potential EMBL ADR19124.1

Chain

30 – 320

291

Potential

PRO_5000662451

Regions

Nucleotide binding

21 – 25

ATP By similarity HAMAP-Rule MF_00339

Nucleotide binding

155 – 159

ATP By similarity HAMAP-Rule MF_00339

Nucleotide binding

172 – 188

ATP By similarity HAMAP-Rule MF_00339

Sites

Active site

128

Proton acceptor By similarity HAMAP-Rule MF_00339

Metal binding

186

Magnesium; via carbonyl oxygen By similarity HAMAP-Rule MF_00339

Metal binding

188

Magnesium By similarity HAMAP-Rule MF_00339

Binding site

163

Substrate By similarity HAMAP-Rule MF_00339

Binding site

244

Substrate By similarity HAMAP-Rule MF_00339

Binding site

250

Substrate By similarity HAMAP-Rule MF_00339

Binding site

253

Substrate By similarity HAMAP-Rule MF_00339

Sequences

Sequence

Length

Mass (Da)

Tools

E4TIZ2 [UniParc].

Last modified February 8, 2011. Version 1.
Checksum: 12474B17187A3047
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FASTA

320

34,104

        10         20         30         40         50         60 
MKRIAVMTSG GDCPGMNAAI RSVVRTAIAH NLEPFGIEQG YKGLIEGKII PMSNKSVANI 

        70         80         90        100        110        120 
IQRGGTILKS ARSMEFKTDE GQRKAVNNLA ELGIEGLIII GGDGSLTGAK ILSERYGIKT 

       130        140        150        160        170        180 
IGIPGSIDND LCCTDMSIGV DTALNTIVRA VDSINDTASS HDRTFLIEVM GRNCGYLALV 

       190        200        210        220        230        240 
SAIATGAEAV LIPEVQYDIE KIIAKIKKRY EEGKSRSIII IAEGVGSAMD FGKVFGMIGG 

       250        260        270        280        290        300 
FDTRVTVLGH LQRGGSPTVF DRILATRMGT AAVEALLDGV TASMTALQKT KIELVPFKDI 

       310        320 
IGLKKPLDHK LIEIAEVLSR

« Hide

References

[1]

"The complete genome of chromosome of Calditerrivibrio nitroreducens DSM 19672."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Zeytun A., Brettin T., Detter J.C., Tapia R., Han C., Land M., Hauser L., Markowitz V.

Eisen J.A.
Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 19672.

[2]

"Complete genome sequence of Calditerrivibrio nitroreducens type strain (Yu37-1)."
Pitluck S., Sikorski J., Zeytun A., Lapidus A., Nolan M., Lucas S., Hammon N., Deshpande S., Cheng J.F., Tapia R., Han C., Goodwin L., Liolios K., Pagani I., Ivanova N., Mavromatis K., Pati A., Chen A.

Land M.
Stand. Genomic Sci. 4:54-62(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 19672 / NBRC 101217 / Yu37-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002347 Genomic DNA. Translation: ADR19124.1.
RefSeq	YP_004051287.1. NC_014758.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADR19124; ADR19124; Calni_1216.
GeneID	10009238.
KEGG	cni:Calni_1216.
PATRIC	45190187. VBICalNit163602_1297.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000248870.
KO	K00850.
OMA	EFKTVEG.
Enzyme and pathway databases
BioCyc	CNIT768670:GHD1-1240-MONOMER.
UniPathway	UPA00109; UER00182.
Family and domain databases
HAMAP	MF_00339. Phosphofructokinase.
InterPro	IPR012003. ATP_PFK_prok. IPR012828. PFKA_ATP. IPR022953. Phosphofructokinase. IPR015912. Phosphofructokinase_CS. IPR000023. Phosphofructokinase_dom. [Graphical view]
Pfam	PF00365. PFK. 1 hit. [Graphical view]
PIRSF	PIRSF000532. ATP_PFK_prok. 1 hit.
PRINTS	PR00476. PHFRCTKINASE.
SUPFAM	SSF53784. Ppfruckinase. 1 hit.
TIGRFAMs	TIGR02482. PFKA_ATP. 1 hit.
PROSITE	PS00433. PHOSPHOFRUCTOKINASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E4TIZ2_CALNY

Accession

Primary (citable) accession number: E4TIZ2

Entry history

Integrated into UniProtKB/TrEMBL:	February 8, 2011
Last sequence update:	February 8, 2011
Last modified:	May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info

Preferred order of sections

Names and origin

Protein attributes

General annotation (Comments)

Ontologies

Sequence annotation (Features)

Molecule processing

Regions

Sites

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

Entry information