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E4TDW4

- E4TDW4_RIEAD

UniProt

E4TDW4 - E4TDW4_RIEAD

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Protein
Submitted name:

Type II site-specific deoxyribonuclease

Gene
Riean_1818, RA0C_0017
Organism
Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA restriction-modification system Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciRANA693978:GHF6-1868-MONOMER.

Protein family/group databases

REBASEi46596. Ran15868CORF16P.

Names & Taxonomyi

Protein namesi
Submitted name:
Type II site-specific deoxyribonucleaseImported (EC:3.1.21.4Imported)
Submitted name:
Type ii site-specific deoxyribonucleaseImported
Gene namesi
Ordered Locus Names:Riean_1818Imported
ORF Names:RA0C_0017Imported
OrganismiRiemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014)Imported
Taxonomic identifieri693978 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeRiemerella
ProteomesiUP000010093: Chromosome, UP000008719: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000244578.
KOiK01155.

Family and domain databases

InterProiIPR011335. Restrct_endonuc-II-like.
IPR021191. Restrct_endonuc_II_DpmII.
IPR007637. Restrct_endonuc_II_DpmII-like.
[Graphical view]
PfamiPF04556. DpnII. 1 hit.
[Graphical view]
PIRSFiPIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
SUPFAMiSSF52980. SSF52980. 1 hit.

Sequencei

Sequence statusi: Complete.

E4TDW4-1 [UniParc]FASTAAdd to Basket

« Hide

MSEQFKIFLS QLSETNATLD YFADFKKIRN NVNKIAIKLN QLNYLIGKEN    50
LKEAVIELYE ENSKVFEVLD ILIAIRKNKN AKTFNNKGEI VLLDTYFTSP 100
ELILEYIEET GLAEVFRNKD VTNLVDYVFG IEVGLDTNAR KNRGGDNMSK 150
AVSLIFDKAG VFYKKEVNNT IFPEIISLGA DVKRFDFVIK TKKKTYLIET 200
NYYNSGGSKL NETARSYSDV APKINLYEGY EFVWITDGQG WFSAKNKLEE 250
AYNIIPSLYN LITLEDFIKK IQEETVIEF 279
Length:279
Mass (Da):32,137
Last modified:February 8, 2011 - v1
Checksum:iD1D54513F1E774BE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002346 Genomic DNA. Translation: ADQ82973.1.
CP003388 Genomic DNA. Translation: AFD55042.1.
RefSeqiYP_004046479.1. NC_014738.1.
YP_005393585.1. NC_017045.1.

Genome annotation databases

EnsemblBacteriaiADQ82973; ADQ82973; Riean_1818.
AFD55042; AFD55042; RA0C_0017.
GeneIDi10002598.
11996443.
KEGGirai:RA0C_0017.
ran:Riean_1818.
PATRICi45354452. VBIRieAna155424_1855.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002346 Genomic DNA. Translation: ADQ82973.1 .
CP003388 Genomic DNA. Translation: AFD55042.1 .
RefSeqi YP_004046479.1. NC_014738.1.
YP_005393585.1. NC_017045.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein family/group databases

REBASEi 46596. Ran15868CORF16P.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADQ82973 ; ADQ82973 ; Riean_1818 .
AFD55042 ; AFD55042 ; RA0C_0017 .
GeneIDi 10002598.
11996443.
KEGGi rai:RA0C_0017.
ran:Riean_1818.
PATRICi 45354452. VBIRieAna155424_1855.

Phylogenomic databases

HOGENOMi HOG000244578.
KOi K01155.

Enzyme and pathway databases

BioCyci RANA693978:GHF6-1868-MONOMER.

Family and domain databases

InterProi IPR011335. Restrct_endonuc-II-like.
IPR021191. Restrct_endonuc_II_DpmII.
IPR007637. Restrct_endonuc_II_DpmII-like.
[Graphical view ]
Pfami PF04556. DpnII. 1 hit.
[Graphical view ]
PIRSFi PIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
SUPFAMi SSF52980. SSF52980. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014 and DSM 15868Imported.
  2. "Complete Genome Sequence of Riemerella anatipestifer Reference Strain."
    Wang X., Zhu D., Wang M., Cheng A., Jia R., Zhou Y., Chen Z., Luo Q., Liu F., Wang Y., Chen X.Y.
    J. Bacteriol. 194:3270-3271(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 11845Imported.
  3. "Riemerella anatipestifer ATCC 11845 Complete Genome."
    Cheng A.-C., Wang M.-S., Zhu D.-K., Wang X.-J.
    Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC 11845Imported.

Entry informationi

Entry nameiE4TDW4_RIEAD
AccessioniPrimary (citable) accession number: E4TDW4
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: April 16, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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