Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

E4TDW4

- E4TDW4_RIEAD

UniProt

E4TDW4 - E4TDW4_RIEAD

Protein
Submitted name:

Type II site-specific deoxyribonuclease

Gene

Riean_1818

Organism
Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 25 (01 Oct 2014)
      Sequence version 1 (08 Feb 2011)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. DNA binding Source: InterPro
    2. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA restriction-modification system Source: InterPro

    Keywords - Molecular functioni

    HydrolaseImported

    Enzyme and pathway databases

    BioCyciRANA693978:GHF6-1868-MONOMER.

    Protein family/group databases

    REBASEi46596. Ran15868CORF16P.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Type II site-specific deoxyribonucleaseImported (EC:3.1.21.4Imported)
    Submitted name:
    Type ii site-specific deoxyribonucleaseImported
    Gene namesi
    Ordered Locus Names:Riean_1818Imported
    ORF Names:RA0C_0017Imported
    OrganismiRiemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014)Imported
    Taxonomic identifieri693978 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeRiemerella
    ProteomesiUP000008719: Chromosome, UP000010093: Chromosome

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000244578.
    KOiK01155.

    Family and domain databases

    InterProiIPR011335. Restrct_endonuc-II-like.
    IPR021191. Restrct_endonuc_II_DpmII.
    IPR007637. Restrct_endonuc_II_DpmII-like.
    [Graphical view]
    PfamiPF04556. DpnII. 1 hit.
    [Graphical view]
    PIRSFiPIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
    SUPFAMiSSF52980. SSF52980. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    E4TDW4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSEQFKIFLS QLSETNATLD YFADFKKIRN NVNKIAIKLN QLNYLIGKEN    50
    LKEAVIELYE ENSKVFEVLD ILIAIRKNKN AKTFNNKGEI VLLDTYFTSP 100
    ELILEYIEET GLAEVFRNKD VTNLVDYVFG IEVGLDTNAR KNRGGDNMSK 150
    AVSLIFDKAG VFYKKEVNNT IFPEIISLGA DVKRFDFVIK TKKKTYLIET 200
    NYYNSGGSKL NETARSYSDV APKINLYEGY EFVWITDGQG WFSAKNKLEE 250
    AYNIIPSLYN LITLEDFIKK IQEETVIEF 279
    Length:279
    Mass (Da):32,137
    Last modified:February 8, 2011 - v1
    Checksum:iD1D54513F1E774BE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002346 Genomic DNA. Translation: ADQ82973.1.
    CP003388 Genomic DNA. Translation: AFD55042.1.
    RefSeqiYP_004046479.1. NC_014738.1.
    YP_005393585.1. NC_017045.1.

    Genome annotation databases

    EnsemblBacteriaiADQ82973; ADQ82973; Riean_1818.
    AFD55042; AFD55042; RA0C_0017.
    GeneIDi10002598.
    11996443.
    KEGGirai:RA0C_0017.
    ran:Riean_1818.
    PATRICi45354452. VBIRieAna155424_1855.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002346 Genomic DNA. Translation: ADQ82973.1 .
    CP003388 Genomic DNA. Translation: AFD55042.1 .
    RefSeqi YP_004046479.1. NC_014738.1.
    YP_005393585.1. NC_017045.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    REBASEi 46596. Ran15868CORF16P.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADQ82973 ; ADQ82973 ; Riean_1818 .
    AFD55042 ; AFD55042 ; RA0C_0017 .
    GeneIDi 10002598.
    11996443.
    KEGGi rai:RA0C_0017.
    ran:Riean_1818.
    PATRICi 45354452. VBIRieAna155424_1855.

    Phylogenomic databases

    HOGENOMi HOG000244578.
    KOi K01155.

    Enzyme and pathway databases

    BioCyci RANA693978:GHF6-1868-MONOMER.

    Family and domain databases

    InterProi IPR011335. Restrct_endonuc-II-like.
    IPR021191. Restrct_endonuc_II_DpmII.
    IPR007637. Restrct_endonuc_II_DpmII-like.
    [Graphical view ]
    Pfami PF04556. DpnII. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
    SUPFAMi SSF52980. SSF52980. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014Imported and DSM 15868Imported.
    2. "Complete genome sequence of Riemerella anatipestifer reference strain."
      Wang X., Zhu D., Wang M., Cheng A., Jia R., Zhou Y., Chen Z., Luo Q., Liu F., Wang Y., Chen X.Y.
      J. Bacteriol. 194:3270-3271(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 11845Imported.
    3. "Riemerella anatipestifer ATCC 11845 Complete Genome."
      Cheng A.-C., Wang M.-S., Zhu D.-K., Wang X.-J.
      Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: ATCC 11845Imported.

    Entry informationi

    Entry nameiE4TDW4_RIEAD
    AccessioniPrimary (citable) accession number: E4TDW4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 8, 2011
    Last sequence update: February 8, 2011
    Last modified: October 1, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3