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E4TAG1 (E4TAG1_RIEAD) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length195 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. SAAS SAAS020634 RuleBase RU000544 HAMAP-Rule MF_00124

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124.

Sequence similarities

Belongs to the thymidine kinase family. RuleBase RU004165 HAMAP-Rule MF_00124

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding21 – 288ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding93 – 964ATP By similarity HAMAP-Rule MF_00124

Sites

Active site941Proton acceptor By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
E4TAG1 [UniParc].

Last modified February 8, 2011. Version 1.
Checksum: D328D93CBBA44DE3

FASTA19521,906
        10         20         30         40         50         60 
MFLENTINHA KQSGWMEVIC GSMFSGKTEE LIRRLRRAEM AGLNVEIFKP KLDTRYSEED 

        70         80         90        100        110        120 
VVSHNRNKIR STAVDTPNEI LLLGSNCDVV GIDEAQFFDQ GIVEVANQLA NNGVRVVIAG 

       130        140        150        160        170        180 
LDMDFKGRPF GPMPYLMATA EYVTKVHAIC KRTGNLANYS MRTSTSQDLV ELGETESYEA 

       190 
VSRRVFVDEF LNKKS 

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References

« Hide 'large scale' references
[1]"Complete genome sequence of Riemerella anatipestifer type strain (ATCC 11845)."
Mavromatis K., Lu M., Misra M., Lapidus A., Nolan M., Lucas S., Hammon N., Deshpande S., Cheng J.F., Tapia R., Han C., Goodwin L., Pitluck S., Liolios K., Pagani I., Ivanova N., Mikhailova N., Pati A. expand/collapse author list , Chen A., Palaniappan K., Land M., Hauser L., Jeffries C.D., Detter J.C., Brambilla E.M., Rohde M., Goker M., Gronow S., Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Klenk H.P., Kyrpides N.C.
Stand. Genomic Sci. 4:144-153(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014 and DSM 15868 EMBL ADQ82321.1.
[2]"Complete Genome Sequence of Riemerella anatipestifer Reference Strain."
Wang X., Zhu D., Wang M., Cheng A., Jia R., Zhou Y., Chen Z., Luo Q., Liu F., Wang Y., Chen X.Y.
J. Bacteriol. 194:3270-3271(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 11845 EMBL AFD56324.1.
[3]"Riemerella anatipestifer ATCC 11845 Complete Genome."
Cheng A.-C., Wang M.-S., Zhu D.-K., Wang X.-J.
Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 11845 EMBL AFD56324.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002346 Genomic DNA. Translation: ADQ82321.1.
CP003388 Genomic DNA. Translation: AFD56324.1.
RefSeqYP_004045827.1. NC_014738.1.
YP_005394867.1. NC_017045.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADQ82321; ADQ82321; Riean_1161.
AFD56324; AFD56324; RA0C_1429.
GeneID10001922.
11996391.
KEGGrai:RA0C_1429.
ran:Riean_1161.
PATRIC45353062. VBIRieAna155424_1180.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000076390.
KOK00857.

Enzyme and pathway databases

BioCycRANA693978:GHF6-1192-MONOMER.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE4TAG1_RIEAD
AccessionPrimary (citable) accession number: E4TAG1
Entry history
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: June 11, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)