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E4TAG0

- E4TAG0_RIEAD

UniProt

E4TAG0 - E4TAG0_RIEAD

Protein
Submitted name:

Alanine racemase

Gene

Riean_1160

Organism
Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (08 Feb 2011)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.SAAS annotation

    GO - Molecular functioni

    1. alanine racemase activity Source: InterPro
    2. ATP binding Source: InterPro
    3. ligase activity Source: InterPro

    GO - Biological processi

    1. alanine metabolic process Source: InterPro
    2. biosynthetic process Source: InterPro

    Keywords - Molecular functioni

    IsomeraseSAAS annotation

    Keywords - Ligandi

    Pyridoxal phosphateSAAS annotation

    Enzyme and pathway databases

    BioCyciRANA693978:GHF6-1191-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alanine racemaseImported
    Gene namesi
    Ordered Locus Names:Riean_1160Imported
    ORF Names:RA0C_1428Imported
    OrganismiRiemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014)Imported
    Taxonomic identifieri693978 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeRiemerella
    ProteomesiUP000008719: Chromosome, UP000010093: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliE4TAG0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000274965.
    KOiK01775.

    Family and domain databases

    Gene3Di2.40.37.10. 1 hit.
    3.20.20.10. 1 hit.
    3.40.1190.10. 1 hit.
    3.40.1390.10. 1 hit.
    3.90.190.20. 1 hit.
    HAMAPiMF_01201. Ala_racemase.
    InterProiIPR000821. Ala_racemase.
    IPR009006. Ala_racemase/Decarboxylase_C.
    IPR011079. Ala_racemase_C.
    IPR001608. Ala_racemase_N.
    IPR004101. Mur_ligase_C.
    IPR013221. Mur_ligase_cen.
    IPR000713. Mur_ligase_N.
    IPR029066. PLP-binding_barrel.
    [Graphical view]
    PfamiPF00842. Ala_racemase_C. 1 hit.
    PF01168. Ala_racemase_N. 1 hit.
    PF01225. Mur_ligase. 1 hit.
    PF08245. Mur_ligase_M. 1 hit.
    [Graphical view]
    PRINTSiPR00992. ALARACEMASE.
    SMARTiSM01005. Ala_racemase_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.
    SSF53244. SSF53244. 1 hit.
    SSF53623. SSF53623. 1 hit.
    SSF63418. SSF63418. 1 hit.
    TIGRFAMsiTIGR00492. alr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    E4TAG0-1 [UniParc]FASTAAdd to Basket

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    MNYTARQIAE ITGAKLIGAG DKIIKHFAFD SRIIYSPKNT GFVAIKTKKN    50
    NGEKYIASAV EKGIELIVSE HKTLDNEHLS WLIVDDTVKF LQKLAHLHLK 100
    SHNIQTIGIT GSNGKTIVKE WLYQCLSEDI RCVKSPKSFN SQIGLPLSLL 150
    NIKPEHKVGI FEVGISEPNE MTTLETIFSP KIGVLTHIGS AHISNFKSEK 200
    HLVDEKISLF KDSESIIFNG DNILVSNKIN TLYSSKNLIS YGFNKDNNIH 250
    ISSNWKDRQQ PITVQCFDKS FSFPAQQRDE ATLSNVLAII AVMHLLEFST 300
    EKMIEKINNL KAVEMRLESV NGIKNNLIIN DSFNLDLDSL KIAFEFIKSY 350
    QKPKKSLIIT DFTEKSDADN LYQEVASLIN EQNFNKVFLI GEEISQYQHL 400
    LNTESFSFNT TNDLFSNQEF KDLENELILL KGARKFEIEQ VKTYLELQKH 450
    DTVLEVNLNN LLHNINVHKS LLKPETKIMA MVKAYSYGLG GYEIAEFLQH 500
    HHIDYLGVAV ADEGVELRKN GITVPIVVMN PEQHSYNTII EYNLEPNIYS 550
    FRVLELFHKQ LKQNGYEGRY PIHIKLETGM HRLGFKEDEI DQLKDYLNQM 600
    SVKVESIFSH LSSSDIPQEK DYTLAQCQKF DKLSQNIIKD LNYKPLRHIL 650
    NSAGITNYTY YQMDMVRIGI GMMGISASPE IQPLLNPVVA FKSVISQISE 700
    IQPNDSVSYG RRYKASKSTR IATIPVGYAD GVPRLLSNGV GYVGIKNTLC 750
    PIVGSVCMDM MMVDISDLPT KEGDEVTIFH EKPSLEDFAM YSQTIPYEVL 800
    TSISRRVKRV YIKD 814
    Length:814
    Mass (Da):92,484
    Last modified:February 8, 2011 - v1
    Checksum:i9FD4B39EDB4B2E6F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002346 Genomic DNA. Translation: ADQ82320.1.
    CP003388 Genomic DNA. Translation: AFD56323.1.
    RefSeqiYP_004045826.1. NC_014738.1.
    YP_005394866.1. NC_017045.1.

    Genome annotation databases

    EnsemblBacteriaiADQ82320; ADQ82320; Riean_1160.
    AFD56323; AFD56323; RA0C_1428.
    GeneIDi10001921.
    11996390.
    KEGGirai:RA0C_1428.
    ran:Riean_1160.
    PATRICi45353060. VBIRieAna155424_1179.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002346 Genomic DNA. Translation: ADQ82320.1 .
    CP003388 Genomic DNA. Translation: AFD56323.1 .
    RefSeqi YP_004045826.1. NC_014738.1.
    YP_005394866.1. NC_017045.1.

    3D structure databases

    ProteinModelPortali E4TAG0.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADQ82320 ; ADQ82320 ; Riean_1160 .
    AFD56323 ; AFD56323 ; RA0C_1428 .
    GeneIDi 10001921.
    11996390.
    KEGGi rai:RA0C_1428.
    ran:Riean_1160.
    PATRICi 45353060. VBIRieAna155424_1179.

    Phylogenomic databases

    HOGENOMi HOG000274965.
    KOi K01775.

    Enzyme and pathway databases

    BioCyci RANA693978:GHF6-1191-MONOMER.

    Family and domain databases

    Gene3Di 2.40.37.10. 1 hit.
    3.20.20.10. 1 hit.
    3.40.1190.10. 1 hit.
    3.40.1390.10. 1 hit.
    3.90.190.20. 1 hit.
    HAMAPi MF_01201. Ala_racemase.
    InterProi IPR000821. Ala_racemase.
    IPR009006. Ala_racemase/Decarboxylase_C.
    IPR011079. Ala_racemase_C.
    IPR001608. Ala_racemase_N.
    IPR004101. Mur_ligase_C.
    IPR013221. Mur_ligase_cen.
    IPR000713. Mur_ligase_N.
    IPR029066. PLP-binding_barrel.
    [Graphical view ]
    Pfami PF00842. Ala_racemase_C. 1 hit.
    PF01168. Ala_racemase_N. 1 hit.
    PF01225. Mur_ligase. 1 hit.
    PF08245. Mur_ligase_M. 1 hit.
    [Graphical view ]
    PRINTSi PR00992. ALARACEMASE.
    SMARTi SM01005. Ala_racemase_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.
    SSF53244. SSF53244. 1 hit.
    SSF53623. SSF53623. 1 hit.
    SSF63418. SSF63418. 1 hit.
    TIGRFAMsi TIGR00492. alr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014Imported and DSM 15868Imported.
    2. "Complete genome sequence of Riemerella anatipestifer reference strain."
      Wang X., Zhu D., Wang M., Cheng A., Jia R., Zhou Y., Chen Z., Luo Q., Liu F., Wang Y., Chen X.Y.
      J. Bacteriol. 194:3270-3271(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 11845Imported.
    3. "Riemerella anatipestifer ATCC 11845 Complete Genome."
      Cheng A.-C., Wang M.-S., Zhu D.-K., Wang X.-J.
      Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: ATCC 11845Imported.

    Entry informationi

    Entry nameiE4TAG0_RIEAD
    AccessioniPrimary (citable) accession number: E4TAG0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 8, 2011
    Last sequence update: February 8, 2011
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3