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E4TAG0 (E4TAG0_RIEAD) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length814 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. SAAS SAAS009006

Sequences

Sequence LengthMass (Da)Tools
E4TAG0 [UniParc].

Last modified February 8, 2011. Version 1.
Checksum: 9FD4B39EDB4B2E6F

FASTA81492,484
        10         20         30         40         50         60 
MNYTARQIAE ITGAKLIGAG DKIIKHFAFD SRIIYSPKNT GFVAIKTKKN NGEKYIASAV 

        70         80         90        100        110        120 
EKGIELIVSE HKTLDNEHLS WLIVDDTVKF LQKLAHLHLK SHNIQTIGIT GSNGKTIVKE 

       130        140        150        160        170        180 
WLYQCLSEDI RCVKSPKSFN SQIGLPLSLL NIKPEHKVGI FEVGISEPNE MTTLETIFSP 

       190        200        210        220        230        240 
KIGVLTHIGS AHISNFKSEK HLVDEKISLF KDSESIIFNG DNILVSNKIN TLYSSKNLIS 

       250        260        270        280        290        300 
YGFNKDNNIH ISSNWKDRQQ PITVQCFDKS FSFPAQQRDE ATLSNVLAII AVMHLLEFST 

       310        320        330        340        350        360 
EKMIEKINNL KAVEMRLESV NGIKNNLIIN DSFNLDLDSL KIAFEFIKSY QKPKKSLIIT 

       370        380        390        400        410        420 
DFTEKSDADN LYQEVASLIN EQNFNKVFLI GEEISQYQHL LNTESFSFNT TNDLFSNQEF 

       430        440        450        460        470        480 
KDLENELILL KGARKFEIEQ VKTYLELQKH DTVLEVNLNN LLHNINVHKS LLKPETKIMA 

       490        500        510        520        530        540 
MVKAYSYGLG GYEIAEFLQH HHIDYLGVAV ADEGVELRKN GITVPIVVMN PEQHSYNTII 

       550        560        570        580        590        600 
EYNLEPNIYS FRVLELFHKQ LKQNGYEGRY PIHIKLETGM HRLGFKEDEI DQLKDYLNQM 

       610        620        630        640        650        660 
SVKVESIFSH LSSSDIPQEK DYTLAQCQKF DKLSQNIIKD LNYKPLRHIL NSAGITNYTY 

       670        680        690        700        710        720 
YQMDMVRIGI GMMGISASPE IQPLLNPVVA FKSVISQISE IQPNDSVSYG RRYKASKSTR 

       730        740        750        760        770        780 
IATIPVGYAD GVPRLLSNGV GYVGIKNTLC PIVGSVCMDM MMVDISDLPT KEGDEVTIFH 

       790        800        810 
EKPSLEDFAM YSQTIPYEVL TSISRRVKRV YIKD 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Riemerella anatipestifer type strain (ATCC 11845)."
Mavromatis K., Lu M., Misra M., Lapidus A., Nolan M., Lucas S., Hammon N., Deshpande S., Cheng J.F., Tapia R., Han C., Goodwin L., Pitluck S., Liolios K., Pagani I., Ivanova N., Mikhailova N., Pati A. expand/collapse author list , Chen A., Palaniappan K., Land M., Hauser L., Jeffries C.D., Detter J.C., Brambilla E.M., Rohde M., Goker M., Gronow S., Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Klenk H.P., Kyrpides N.C.
Stand. Genomic Sci. 4:144-153(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014 and DSM 15868 EMBL ADQ82320.1.
[2]"Complete Genome Sequence of Riemerella anatipestifer Reference Strain."
Wang X., Zhu D., Wang M., Cheng A., Jia R., Zhou Y., Chen Z., Luo Q., Liu F., Wang Y., Chen X.Y.
J. Bacteriol. 194:3270-3271(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 11845 EMBL AFD56323.1.
[3]"Riemerella anatipestifer ATCC 11845 Complete Genome."
Cheng A.-C., Wang M.-S., Zhu D.-K., Wang X.-J.
Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 11845 EMBL AFD56323.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002346 Genomic DNA. Translation: ADQ82320.1.
CP003388 Genomic DNA. Translation: AFD56323.1.
RefSeqYP_004045826.1. NC_014738.1.
YP_005394866.1. NC_017045.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADQ82320; ADQ82320; Riean_1160.
AFD56323; AFD56323; RA0C_1428.
GeneID10001921.
11996390.
KEGGrai:RA0C_1428.
ran:Riean_1160.
PATRIC45353060. VBIRieAna155424_1179.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000274965.
KOK01775.

Enzyme and pathway databases

BioCycRANA693978:GHF6-1191-MONOMER.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
3.40.1190.10. 1 hit.
3.40.1390.10. 1 hit.
3.90.190.20. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR004101. Mur_ligase_C.
IPR013221. Mur_ligase_cen.
IPR000713. Mur_ligase_N.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
PF01225. Mur_ligase. 1 hit.
PF08245. Mur_ligase_M. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
SSF53244. SSF53244. 1 hit.
SSF53623. SSF53623. 1 hit.
SSF63418. SSF63418. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE4TAG0_RIEAD
AccessionPrimary (citable) accession number: E4TAG0
Entry history
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: April 16, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)