Skip Header

Contribute Send feedback
Read comments (?) or add your own

E4TA86 (E4TA86_RIEAD) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Superoxide dismutase [Cu-Zn] RuleBase RU000393
EC=1.15.1.1 RuleBase RU000393
Gene names
Ordered Locus Names:Riean_1085 EMBL ADQ82246.1
ORF Names:RA0C_1352 EMBL AFD56249.1
OrganismRiemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014) [Complete proteome] [HAMAP] EMBL ADQ82246.1
Taxonomic identifier693978 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Riemerella ›

Protein attributes

Sequence length166 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000393

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000393

Cofactor

Binds 1 copper ion per subunit By similarity. RuleBase RU000393

Binds 1 zinc ion per subunit By similarity. RuleBase RU000393

Sequence similarities

Belongs to the Cu-Zn superoxide dismutase family. RuleBase RU000393

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2727 Potential EMBL ADQ82246.1
Chain28 – 166139 Potential EMBL ADQ82246.1
PRO_5000661517

Sequences

Sequence LengthMass (Da)Tools
E4TA86 [UniParc].

Last modified February 8, 2011. Version 1.
Checksum: 22424B8116DE1744

FASTA16618,059
        10         20         30         40         50         60 
MKKLSLLLGS VFALTSCVTS KTYTIQSKSN TNTKGTATFT QKAKTVTLNI DVHNLTPGKH 

        70         80         90        100        110        120 
AIHIHEFGDC SAKDGSSAGG HWNPTGHHHG KWETEHFHRG DIGNLNADKN GHATLTFSTD 

       130        140        150        160 
KWCLGCKDET KNLYNKSIII HAGEDDYRTQ PTGNAGGRVG CVEIKK

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of Riemerella anatipestifer type strain (ATCC 11845)."
Mavromatis K., Lu M., Misra M., Lapidus A., Nolan M., Lucas S., Hammon N., Deshpande S., Cheng J.F., Tapia R., Han C., Goodwin L., Pitluck S., Liolios K., Pagani I., Ivanova N., Mikhailova N., Pati A. expand/collapse author list , Chen A., Palaniappan K., Land M., Hauser L., Jeffries C.D., Detter J.C., Brambilla E.M., Rohde M., Goker M., Gronow S., Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Klenk H.P., Kyrpides N.C.
Stand. Genomic Sci. 4:144-153(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014 and DSM 15868 EMBL ADQ82246.1.
[2]"Complete Genome Sequence of Riemerella anatipestifer Reference Strain."
Wang X., Zhu D., Wang M., Cheng A., Jia R., Zhou Y., Chen Z., Luo Q., Liu F., Wang Y., Chen X.Y.
J. Bacteriol. 194:3270-3271(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 11845 EMBL AFD56249.1.
[3]"Riemerella anatipestifer ATCC 11845 Complete Genome."
Cheng A.-C., Wang M.-S., Zhu D.-K., Wang X.-J.
Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 11845 EMBL AFD56249.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002346 Genomic DNA. Translation: ADQ82246.1.
CP003388 Genomic DNA. Translation: AFD56249.1.
RefSeqYP_004045752.1. NC_014738.1.
YP_005394792.1. NC_017045.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADQ82246; ADQ82246; Riean_1085.
AFD56249; AFD56249; RA0C_1352.
GeneID10001846.
11996314.
KEGGrai:RA0C_1352.
ran:Riean_1085.
PATRIC45352901. VBIRieAna155424_1100.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000263448.
KOK04565.

Enzyme and pathway databases

BioCycRANA693978:GHF6-1116-MONOMER.

Family and domain databases

Gene3D2.60.40.200. 1 hit.
InterProIPR024134. SOD_Cu/Zn_/chaperones.
IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PANTHERPTHR10003. PTHR10003. 1 hit.
PfamPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMSSF49329. SOD_Cu_Zn. 1 hit.
PROSITEPS00087. SOD_CU_ZN_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE4TA86_RIEAD
AccessionPrimary (citable) accession number: E4TA86
Entry history
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: May 29, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info