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E4TA86

- E4TA86_RIEAD

UniProt

E4TA86 - E4TA86_RIEAD

Protein

Superoxide dismutase [Cu-Zn]

Gene

Riean_1085

Organism
Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 33 (01 Oct 2014)
      Sequence version 1 (08 Feb 2011)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    Cofactori

    Binds 1 copper ion per subunit.UniRule annotation
    Binds 1 zinc ion per subunit.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotation

    Keywords - Ligandi

    CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

    Enzyme and pathway databases

    BioCyciRANA693978:GHF6-1116-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:Riean_1085Imported
    ORF Names:RA0C_1352Imported
    OrganismiRiemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014)Imported
    Taxonomic identifieri693978 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeRiemerella
    ProteomesiUP000008719: Chromosome, UP000010093: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2727 PotentialImportedAdd
    BLAST
    Chaini28 – 166139 PotentialImportedPRO_5000661517Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliE4TA86.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    HOGENOMiHOG000263448.
    KOiK04565.

    Family and domain databases

    Gene3Di2.60.40.200. 1 hit.
    InterProiIPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view]
    PfamiPF00080. Sod_Cu. 1 hit.
    [Graphical view]
    SUPFAMiSSF49329. SSF49329. 1 hit.
    PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    E4TA86-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKKLSLLLGS VFALTSCVTS KTYTIQSKSN TNTKGTATFT QKAKTVTLNI    50
    DVHNLTPGKH AIHIHEFGDC SAKDGSSAGG HWNPTGHHHG KWETEHFHRG 100
    DIGNLNADKN GHATLTFSTD KWCLGCKDET KNLYNKSIII HAGEDDYRTQ 150
    PTGNAGGRVG CVEIKK 166
    Length:166
    Mass (Da):18,059
    Last modified:February 8, 2011 - v1
    Checksum:i22424B8116DE1744
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002346 Genomic DNA. Translation: ADQ82246.1.
    CP003388 Genomic DNA. Translation: AFD56249.1.
    RefSeqiYP_004045752.1. NC_014738.1.
    YP_005394792.1. NC_017045.1.

    Genome annotation databases

    EnsemblBacteriaiADQ82246; ADQ82246; Riean_1085.
    AFD56249; AFD56249; RA0C_1352.
    GeneIDi10001846.
    11996314.
    KEGGirai:RA0C_1352.
    ran:Riean_1085.
    PATRICi45352901. VBIRieAna155424_1100.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002346 Genomic DNA. Translation: ADQ82246.1 .
    CP003388 Genomic DNA. Translation: AFD56249.1 .
    RefSeqi YP_004045752.1. NC_014738.1.
    YP_005394792.1. NC_017045.1.

    3D structure databases

    ProteinModelPortali E4TA86.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADQ82246 ; ADQ82246 ; Riean_1085 .
    AFD56249 ; AFD56249 ; RA0C_1352 .
    GeneIDi 10001846.
    11996314.
    KEGGi rai:RA0C_1352.
    ran:Riean_1085.
    PATRICi 45352901. VBIRieAna155424_1100.

    Phylogenomic databases

    HOGENOMi HOG000263448.
    KOi K04565.

    Enzyme and pathway databases

    BioCyci RANA693978:GHF6-1116-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.200. 1 hit.
    InterProi IPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view ]
    Pfami PF00080. Sod_Cu. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49329. SSF49329. 1 hit.
    PROSITEi PS00087. SOD_CU_ZN_1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014Imported and DSM 15868Imported.
    2. "Complete genome sequence of Riemerella anatipestifer reference strain."
      Wang X., Zhu D., Wang M., Cheng A., Jia R., Zhou Y., Chen Z., Luo Q., Liu F., Wang Y., Chen X.Y.
      J. Bacteriol. 194:3270-3271(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 11845Imported.
    3. "Riemerella anatipestifer ATCC 11845 Complete Genome."
      Cheng A.-C., Wang M.-S., Zhu D.-K., Wang X.-J.
      Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: ATCC 11845Imported.

    Entry informationi

    Entry nameiE4TA86_RIEAD
    AccessioniPrimary (citable) accession number: E4TA86
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 8, 2011
    Last sequence update: February 8, 2011
    Last modified: October 1, 2014
    This is version 33 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3