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E4TA86

- E4TA86_RIEAD

UniProt

E4TA86 - E4TA86_RIEAD

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Protein

Superoxide dismutase [Cu-Zn]

Gene

Riean_1085

Organism
Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Protein has several cofactor binding sites:
  • Note: Binds 1 copper ion per subunit.UniRule annotation
  • Note: Binds 1 zinc ion per subunit.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Enzyme and pathway databases

BioCyciRANA693978:GHF6-1116-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Riean_1085Imported
ORF Names:RA0C_1352Imported
OrganismiRiemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014)Imported
Taxonomic identifieri693978 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeRiemerella
ProteomesiUP000008719: Chromosome, UP000010093: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2727 PotentialImportedAdd
BLAST
Chaini28 – 166139 PotentialImportedPRO_5000661517Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliE4TA86.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000263448.
KOiK04565.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

E4TA86-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKKLSLLLGS VFALTSCVTS KTYTIQSKSN TNTKGTATFT QKAKTVTLNI
60 70 80 90 100
DVHNLTPGKH AIHIHEFGDC SAKDGSSAGG HWNPTGHHHG KWETEHFHRG
110 120 130 140 150
DIGNLNADKN GHATLTFSTD KWCLGCKDET KNLYNKSIII HAGEDDYRTQ
160
PTGNAGGRVG CVEIKK
Length:166
Mass (Da):18,059
Last modified:February 8, 2011 - v1
Checksum:i22424B8116DE1744
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002346 Genomic DNA. Translation: ADQ82246.1.
CP003388 Genomic DNA. Translation: AFD56249.1.
RefSeqiYP_004045752.1. NC_014738.1.
YP_005394792.1. NC_017045.1.

Genome annotation databases

EnsemblBacteriaiADQ82246; ADQ82246; Riean_1085.
AFD56249; AFD56249; RA0C_1352.
GeneIDi10001846.
11996314.
KEGGirai:RA0C_1352.
ran:Riean_1085.
PATRICi45352901. VBIRieAna155424_1100.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002346 Genomic DNA. Translation: ADQ82246.1 .
CP003388 Genomic DNA. Translation: AFD56249.1 .
RefSeqi YP_004045752.1. NC_014738.1.
YP_005394792.1. NC_017045.1.

3D structure databases

ProteinModelPortali E4TA86.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADQ82246 ; ADQ82246 ; Riean_1085 .
AFD56249 ; AFD56249 ; RA0C_1352 .
GeneIDi 10001846.
11996314.
KEGGi rai:RA0C_1352.
ran:Riean_1085.
PATRICi 45352901. VBIRieAna155424_1100.

Phylogenomic databases

HOGENOMi HOG000263448.
KOi K04565.

Enzyme and pathway databases

BioCyci RANA693978:GHF6-1116-MONOMER.

Family and domain databases

Gene3Di 2.60.40.200. 1 hit.
InterProi IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view ]
Pfami PF00080. Sod_Cu. 1 hit.
[Graphical view ]
SUPFAMi SSF49329. SSF49329. 1 hit.
PROSITEi PS00087. SOD_CU_ZN_1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 11845 / DSM 15868 / JCM 9532 / NCTC 11014Imported and DSM 15868Imported.
  2. "Complete genome sequence of Riemerella anatipestifer reference strain."
    Wang X., Zhu D., Wang M., Cheng A., Jia R., Zhou Y., Chen Z., Luo Q., Liu F., Wang Y., Chen X.Y.
    J. Bacteriol. 194:3270-3271(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 11845Imported.
  3. "Riemerella anatipestifer ATCC 11845 Complete Genome."
    Cheng A.-C., Wang M.-S., Zhu D.-K., Wang X.-J.
    Submitted (SEP-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC 11845Imported.

Entry informationi

Entry nameiE4TA86_RIEAD
AccessioniPrimary (citable) accession number: E4TA86
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: November 26, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3