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E4SYG6 (E4SYG6_LACDN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding20 – 278GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding82 – 865GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding137 – 1404GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
E4SYG6 [UniParc].

Last modified February 8, 2011. Version 1.
Checksum: 7E480B843F956711

FASTA39643,357
        10         20         30         40         50         60 
MAEKEHYVRT KPHVNIGTIG HVDHGKTTLT AAITTVLAKK GLAQAEDYSQ IDAAPEEKER 

        70         80         90        100        110        120 
GITINTAHVE YETEKRHYAH MDAPGHADYI KNMITGAAQM DGAILVVAAT DGPMPQTREH 

       130        140        150        160        170        180 
ILLARQVGVN YIVVFLNKCD LVDDPELIDL VEMEVRDLLS EYGYPGDDVP VVRGSALKAL 

       190        200        210        220        230        240 
EGDEEAQKKI EELMDVVDEY IPTPERETDK PFLMPVEDVF TITGRGTVAS GRIDRGTVKV 

       250        260        270        280        290        300 
GDSVEIVGLV EKVLTSVVTG LEMFHKTLDL GEAGDNVGVL LRGVDRDQIV RGQVLAAPGS 

       310        320        330        340        350        360 
IKTHKTFKGQ VYILSKDEGG RHTPFFSDYR PQFYFHTTDI TGEIELPEGT EMVMPGDNTE 

       370        380        390 
FSVTLIKPAA IEVGTKFTIR EGGRTVGAGQ VTEIDD 

« Hide

References

[1]"Complete genome sequence of Lactobacillus delbrueckii subsp. bulgaricus strain ND02."
Chen W., Zhang H., Sun Z., Chen X., Guo Z., Wang J., Wu L., Zhang X., Zhou Z., Sun T., Wang L., Meng H.
Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ND02.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002341 Genomic DNA. Translation: ADQ60759.1.
RefSeqYP_004033736.1. NC_014727.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADQ60759; ADQ60759; LDBND_0712.
GeneID9990373.
KEGGlde:LDBND_0712.
PATRIC43080746. VBILacDel160915_0712.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000229290.
KOK02358.
OMAVTPHTEF.

Enzyme and pathway databases

BioCycLDEL767455:GHXE-731-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE4SYG6_LACDN
AccessionPrimary (citable) accession number: E4SYG6
Entry history
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: April 16, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)