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Protein
Submitted name:

Alpha amylase catalytic region

Gene

Calkro_2177

Organism
Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi139Calcium 1UniRule annotation1
Metal bindingi193Calcium 1UniRule annotation1
Active sitei226NucleophileUniRule annotation1
Active sitei251Proton donorUniRule annotation1
Metal bindingi289Calcium 3; via carbonyl oxygenUniRule annotation1
Metal bindingi394Calcium 3UniRule annotation1
Metal bindingi416Calcium 3UniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandCalciumUniRule annotation, Metal-bindingUniRule annotation

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Calkro_2177Imported
OrganismiCaldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002)Imported
Taxonomic identifieri632348 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisCaldicellulosiruptor
Proteomesi
  • UP000006835 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 35HelicalSequence analysisAdd BLAST24

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini34 – 375AamyInterPro annotationAdd BLAST342

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000031038.
KOiK01176.
OMAiRLNYNQD.
OrthoDBiPOG091H0HQ3.

Family and domain databases

InterProiView protein in InterPro
IPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006047. Glyco_hydro_13_cat_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
PIRSFiPIRSF001021. Alph-amls_thrmst. 2 hits.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

E4SGZ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNGLFKKLSK KLTIISLIVI IVFLLTSSLS IYAGVMMQGF YWDVPAGGTW
60 70 80 90 100
WNTLASKAYE LKYMVGGSYG INRIWFPPAY KGQGGAYSMG YDPHDYYDLG
110 120 130 140 150
QYYQDGTTET RFGSQSELKN AISKYKSYGI SVTEDIVLNH RSGGKSEYNP
160 170 180 190 200
KTGTNTWTDF TNTASGMCQW HWDAFHPNNY CSGDEGTFAG FPDVCYTSGP
210 220 230 240 250
AYNDMKAWMN WLKSSTNAGF DSWRYDYVKG YGYWVVKDFN AATSPTFSVG
260 270 280 290 300
EYWDANTSTL DWWANSSGSS VFDFALYYTL RDICNNTSGS GYLPNVFDYS
310 320 330 340 350
KSYAAKNPFK AVTFVANHDT DEIVNDKMMA YAFILTYQGY PCIFWKDYYD
360 370 380 390 400
YGLATGGGAS PGGWGNGIKQ LVWCREKLAA GAPNIEILKS NDGDIIIYGS
410 420 430 440 450
KGYSTSSPGY IVVINDHPSQ WKGAWVQTSN SYLKGKTLKA YAWSSTVSGQ
460 470 480
NVQPQNKYCD ANGWVEVWAP PRGYAVYSVD GL
Length:482
Mass (Da):53,810
Last modified:February 8, 2011 - v1
Checksum:i07DFDD19C5392E72
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002330 Genomic DNA. Translation: ADQ47015.1.
RefSeqiWP_013431087.1. NC_014720.1.

Genome annotation databases

EnsemblBacteriaiADQ47015; ADQ47015; Calkro_2177.
KEGGickn:Calkro_2177.
PATRICifig|632348.3.peg.2292.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiE4SGZ0_CALK2
AccessioniPrimary (citable) accession number: E4SGZ0
Entry historyiIntegrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: July 5, 2017
This is version 41 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported