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E4SGZ0

- E4SGZ0_CALK2

UniProt

E4SGZ0 - E4SGZ0_CALK2

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Protein
Submitted name:

Alpha amylase catalytic region

Gene
Calkro_2177
Organism
Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. cation binding Source: InterPro
  2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCKRO632348:GI5C-2229-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Calkro_2177Imported
OrganismiCaldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002)Imported
Taxonomic identifieri632348 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisCaldicellulosiruptor
ProteomesiUP000006835: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3434 PredictedImportedAdd
BLAST
Chaini35 – 482448 PredictedImportedPRO_5000660175Add
BLAST

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000031038.
KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

E4SGZ0-1 [UniParc]FASTAAdd to Basket

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MNGLFKKLSK KLTIISLIVI IVFLLTSSLS IYAGVMMQGF YWDVPAGGTW    50
WNTLASKAYE LKYMVGGSYG INRIWFPPAY KGQGGAYSMG YDPHDYYDLG 100
QYYQDGTTET RFGSQSELKN AISKYKSYGI SVTEDIVLNH RSGGKSEYNP 150
KTGTNTWTDF TNTASGMCQW HWDAFHPNNY CSGDEGTFAG FPDVCYTSGP 200
AYNDMKAWMN WLKSSTNAGF DSWRYDYVKG YGYWVVKDFN AATSPTFSVG 250
EYWDANTSTL DWWANSSGSS VFDFALYYTL RDICNNTSGS GYLPNVFDYS 300
KSYAAKNPFK AVTFVANHDT DEIVNDKMMA YAFILTYQGY PCIFWKDYYD 350
YGLATGGGAS PGGWGNGIKQ LVWCREKLAA GAPNIEILKS NDGDIIIYGS 400
KGYSTSSPGY IVVINDHPSQ WKGAWVQTSN SYLKGKTLKA YAWSSTVSGQ 450
NVQPQNKYCD ANGWVEVWAP PRGYAVYSVD GL 482
Length:482
Mass (Da):53,810
Last modified:February 8, 2011 - v1
Checksum:i07DFDD19C5392E72
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002330 Genomic DNA. Translation: ADQ47015.1.
RefSeqiWP_013431087.1. NC_014720.1.
YP_004024834.1. NC_014720.1.

Genome annotation databases

EnsemblBacteriaiADQ47015; ADQ47015; Calkro_2177.
GeneIDi9982156.
KEGGickn:Calkro_2177.
PATRICi42811421. VBICalKro6863_2292.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002330 Genomic DNA. Translation: ADQ47015.1 .
RefSeqi WP_013431087.1. NC_014720.1.
YP_004024834.1. NC_014720.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADQ47015 ; ADQ47015 ; Calkro_2177 .
GeneIDi 9982156.
KEGGi ckn:Calkro_2177.
PATRICi 42811421. VBICalKro6863_2292.

Phylogenomic databases

HOGENOMi HOG000031038.
KOi K01176.

Enzyme and pathway databases

BioCyci CKRO632348:GI5C-2229-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Complete sequence of Caldicellulosiruptor kronotskyensis 2002."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N., Blumer-Schuette S.E., Kelly R.M., Woyke T.
    Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 2002.
  2. "Complete genome sequences for the anaerobic, extremely thermophilic plant biomass-degrading bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensensis, and Caldicellulosiruptor lactoaceticus."
    Blumer-Schuette S.E., Ozdemir I., Mistry D., Lucas S., Lapidus A., Cheng J.F., Goodwin L.A., Pitluck S., Land M.L., Hauser L.J., Woyke T., Mikhailova N., Pati A., Kyrpides N.C., Ivanova N., Detter J.C., Walston-Davenport K., Han S., Adams M.W., Kelly R.M.
    J. Bacteriol. 193:1483-1484(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 18902 / VKM B-2412 / 2002.

Entry informationi

Entry nameiE4SGZ0_CALK2
AccessioniPrimary (citable) accession number: E4SGZ0
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: September 3, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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