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E4SGZ0

- E4SGZ0_CALK2

UniProt

E4SGZ0 - E4SGZ0_CALK2

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Protein
Submitted name:

Alpha amylase catalytic region

Gene

Calkro_2177

Organism
Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. cation binding Source: InterPro
  2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCKRO632348:GI5C-2229-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Calkro_2177Imported
OrganismiCaldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002)Imported
Taxonomic identifieri632348 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisCaldicellulosiruptor
ProteomesiUP000006835: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3434 PotentialImportedAdd
BLAST
Chaini35 – 482448 PotentialImportedPRO_5000660175Add
BLAST

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000031038.
KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

E4SGZ0-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MNGLFKKLSK KLTIISLIVI IVFLLTSSLS IYAGVMMQGF YWDVPAGGTW
60 70 80 90 100
WNTLASKAYE LKYMVGGSYG INRIWFPPAY KGQGGAYSMG YDPHDYYDLG
110 120 130 140 150
QYYQDGTTET RFGSQSELKN AISKYKSYGI SVTEDIVLNH RSGGKSEYNP
160 170 180 190 200
KTGTNTWTDF TNTASGMCQW HWDAFHPNNY CSGDEGTFAG FPDVCYTSGP
210 220 230 240 250
AYNDMKAWMN WLKSSTNAGF DSWRYDYVKG YGYWVVKDFN AATSPTFSVG
260 270 280 290 300
EYWDANTSTL DWWANSSGSS VFDFALYYTL RDICNNTSGS GYLPNVFDYS
310 320 330 340 350
KSYAAKNPFK AVTFVANHDT DEIVNDKMMA YAFILTYQGY PCIFWKDYYD
360 370 380 390 400
YGLATGGGAS PGGWGNGIKQ LVWCREKLAA GAPNIEILKS NDGDIIIYGS
410 420 430 440 450
KGYSTSSPGY IVVINDHPSQ WKGAWVQTSN SYLKGKTLKA YAWSSTVSGQ
460 470 480
NVQPQNKYCD ANGWVEVWAP PRGYAVYSVD GL
Length:482
Mass (Da):53,810
Last modified:February 8, 2011 - v1
Checksum:i07DFDD19C5392E72
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002330 Genomic DNA. Translation: ADQ47015.1.
RefSeqiWP_013431087.1. NC_014720.1.
YP_004024834.1. NC_014720.1.

Genome annotation databases

EnsemblBacteriaiADQ47015; ADQ47015; Calkro_2177.
GeneIDi9982156.
KEGGickn:Calkro_2177.
PATRICi42811421. VBICalKro6863_2292.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002330 Genomic DNA. Translation: ADQ47015.1 .
RefSeqi WP_013431087.1. NC_014720.1.
YP_004024834.1. NC_014720.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADQ47015 ; ADQ47015 ; Calkro_2177 .
GeneIDi 9982156.
KEGGi ckn:Calkro_2177.
PATRICi 42811421. VBICalKro6863_2292.

Phylogenomic databases

HOGENOMi HOG000031038.
KOi K01176.

Enzyme and pathway databases

BioCyci CKRO632348:GI5C-2229-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Complete sequence of Caldicellulosiruptor kronotskyensis 2002."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N., Blumer-Schuette S.E., Kelly R.M., Woyke T.
    Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 2002.
  2. "Complete genome sequences for the anaerobic, extremely thermophilic plant biomass-degrading bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensenis, and Caldicellulosiruptor lactoaceticus."
    Blumer-Schuette S.E., Ozdemir I., Mistry D., Lucas S., Lapidus A., Cheng J.F., Goodwin L.A., Pitluck S., Land M.L., Hauser L.J., Woyke T., Mikhailova N., Pati A., Kyrpides N.C., Ivanova N., Detter J.C., Walston-Davenport K., Han S., Adams M.W., Kelly R.M.
    J. Bacteriol. 193:1483-1484(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 18902 / VKM B-2412 / 2002Imported.

Entry informationi

Entry nameiE4SGZ0_CALK2
AccessioniPrimary (citable) accession number: E4SGZ0
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: October 29, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3