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E4SGZ0

- E4SGZ0_CALK2

UniProt

E4SGZ0 - E4SGZ0_CALK2

Protein
Submitted name:

Alpha amylase catalytic region

Gene

Calkro_2177

Organism
Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 1 (08 Feb 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. cation binding Source: InterPro
    2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciCKRO632348:GI5C-2229-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha amylase catalytic regionImported
    Gene namesi
    Ordered Locus Names:Calkro_2177Imported
    OrganismiCaldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002)Imported
    Taxonomic identifieri632348 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisCaldicellulosiruptor
    ProteomesiUP000006835: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 3434 PotentialImportedAdd
    BLAST
    Chaini35 – 482448 PotentialImportedPRO_5000660175Add
    BLAST

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    HOGENOMiHOG000031038.
    KOiK01176.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR015237. Alpha-amylase_C_pro.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF09154. DUF1939. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    E4SGZ0-1 [UniParc]FASTAAdd to Basket

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    MNGLFKKLSK KLTIISLIVI IVFLLTSSLS IYAGVMMQGF YWDVPAGGTW    50
    WNTLASKAYE LKYMVGGSYG INRIWFPPAY KGQGGAYSMG YDPHDYYDLG 100
    QYYQDGTTET RFGSQSELKN AISKYKSYGI SVTEDIVLNH RSGGKSEYNP 150
    KTGTNTWTDF TNTASGMCQW HWDAFHPNNY CSGDEGTFAG FPDVCYTSGP 200
    AYNDMKAWMN WLKSSTNAGF DSWRYDYVKG YGYWVVKDFN AATSPTFSVG 250
    EYWDANTSTL DWWANSSGSS VFDFALYYTL RDICNNTSGS GYLPNVFDYS 300
    KSYAAKNPFK AVTFVANHDT DEIVNDKMMA YAFILTYQGY PCIFWKDYYD 350
    YGLATGGGAS PGGWGNGIKQ LVWCREKLAA GAPNIEILKS NDGDIIIYGS 400
    KGYSTSSPGY IVVINDHPSQ WKGAWVQTSN SYLKGKTLKA YAWSSTVSGQ 450
    NVQPQNKYCD ANGWVEVWAP PRGYAVYSVD GL 482
    Length:482
    Mass (Da):53,810
    Last modified:February 8, 2011 - v1
    Checksum:i07DFDD19C5392E72
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002330 Genomic DNA. Translation: ADQ47015.1.
    RefSeqiWP_013431087.1. NC_014720.1.
    YP_004024834.1. NC_014720.1.

    Genome annotation databases

    EnsemblBacteriaiADQ47015; ADQ47015; Calkro_2177.
    GeneIDi9982156.
    KEGGickn:Calkro_2177.
    PATRICi42811421. VBICalKro6863_2292.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002330 Genomic DNA. Translation: ADQ47015.1 .
    RefSeqi WP_013431087.1. NC_014720.1.
    YP_004024834.1. NC_014720.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADQ47015 ; ADQ47015 ; Calkro_2177 .
    GeneIDi 9982156.
    KEGGi ckn:Calkro_2177.
    PATRICi 42811421. VBICalKro6863_2292.

    Phylogenomic databases

    HOGENOMi HOG000031038.
    KOi K01176.

    Enzyme and pathway databases

    BioCyci CKRO632348:GI5C-2229-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR015237. Alpha-amylase_C_pro.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF09154. DUF1939. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of Caldicellulosiruptor kronotskyensis 2002."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N., Blumer-Schuette S.E., Kelly R.M., Woyke T.
      Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 2002.
    2. "Complete genome sequences for the anaerobic, extremely thermophilic plant biomass-degrading bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensenis, and Caldicellulosiruptor lactoaceticus."
      Blumer-Schuette S.E., Ozdemir I., Mistry D., Lucas S., Lapidus A., Cheng J.F., Goodwin L.A., Pitluck S., Land M.L., Hauser L.J., Woyke T., Mikhailova N., Pati A., Kyrpides N.C., Ivanova N., Detter J.C., Walston-Davenport K., Han S., Adams M.W., Kelly R.M.
      J. Bacteriol. 193:1483-1484(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 18902 / VKM B-2412 / 2002Imported.

    Entry informationi

    Entry nameiE4SGZ0_CALK2
    AccessioniPrimary (citable) accession number: E4SGZ0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 8, 2011
    Last sequence update: February 8, 2011
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3