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Protein
Submitted name:

Glycoside hydrolase family 16

Gene

Calkro_0121

Organism
Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHydrolaseImported

Protein family/group databases

CAZyiCBM32. Carbohydrate-Binding Module Family 32.
CBM54. Carbohydrate-Binding Module Family 54.
GH16. Glycoside Hydrolase Family 16.
GH55. Glycoside Hydrolase Family 55.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycoside hydrolase family 16Imported
Gene namesi
Ordered Locus Names:Calkro_0121Imported
OrganismiCaldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002)Imported
Taxonomic identifieri632348 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacterales Family III. Incertae SedisCaldicellulosiruptor
Proteomesi
  • UP000006835 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 25Sequence analysisAdd BLAST25
ChainiPRO_500318628526 – 2229Sequence analysisAdd BLAST2204

Structurei

3D structure databases

ProteinModelPortaliE4SCQ4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini25 – 83SLHInterPro annotationAdd BLAST59
Domaini84 – 147SLHInterPro annotationAdd BLAST64
Domaini150 – 210SLHInterPro annotationAdd BLAST61
Domaini464 – 555Fibronectin type-IIIInterPro annotationAdd BLAST92
Domaini563 – 803GH16InterPro annotationAdd BLAST241
Domaini940 – 1032Fibronectin type-IIIInterPro annotationAdd BLAST93
Domaini1038 – 1127Fibronectin type-IIIInterPro annotationAdd BLAST90
Domaini1276 – 1366Fibronectin type-IIIInterPro annotationAdd BLAST91
Domaini1371 – 1459Fibronectin type-IIIInterPro annotationAdd BLAST89
Domaini2077 – 2225F5/8 type CInterPro annotationAdd BLAST149

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

HOGENOMiHOG000166729.
OrthoDBiPOG091H03M1.

Family and domain databases

CDDicd00063. FN3. 5 hits.
Gene3Di2.160.20.10. 1 hit.
2.60.120.260. 1 hit.
2.60.40.10. 6 hits.
InterProiView protein in InterPro
IPR008999. Actin-crosslinking.
IPR013320. ConA-like_dom_sf.
IPR000421. FA58C.
IPR003961. FN3_dom.
IPR036116. FN3_sf.
IPR008979. Galactose-bd-like_sf.
IPR000757. GH16.
IPR008263. GH16_AS.
IPR013783. Ig-like_fold.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
IPR001119. SLH_dom.
PfamiView protein in Pfam
PF00754. F5_F8_type_C. 1 hit.
PF00041. fn3. 4 hits.
PF00722. Glyco_hydro_16. 1 hit.
PF00395. SLH. 3 hits.
SMARTiView protein in SMART
SM00231. FA58C. 1 hit.
SM00060. FN3. 5 hits.
SUPFAMiSSF49265. SSF49265. 3 hits.
SSF49785. SSF49785. 1 hit.
SSF49899. SSF49899. 1 hit.
SSF50405. SSF50405. 2 hits.
SSF51126. SSF51126. 3 hits.
PROSITEiView protein in PROSITE
PS50022. FA58C_3. 1 hit.
PS50853. FN3. 5 hits.
PS01034. GH16_1. 1 hit.
PS51762. GH16_2. 1 hit.
PS51272. SLH. 3 hits.

Sequencei

Sequence statusi: Complete.

E4SCQ4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNFSRFISLV LVFALILSFF APASAQTNTR NDISGHWAAG ELTKWISKGI
60 70 80 90 100
LQGYPDGTIR PDKSITRAEF VMLLDRIFKF VDKANLSFAD VSTNSWYADA
110 120 130 140 150
VAKATAVGAI IGDTNGKFRP NDPISRTEAA VILSRIFNLE ATNESVLDKF
160 170 180 190 200
SDSDKIPSWG KEALSAMIEK GYMKGRSGNV IAPNSPLTRA EFVKLIDKIV
210 220 230 240 250
GELVTTEGTR TGNVAGNLVV NTKNVTLKNM VIDGDLYLTQ GVAEGAVQLE
260 270 280 290 300
NVVVKGRTII KGGGEIVIDN SSIADKLFVE KMKGNKRIIA SGSTEIKSVE
310 320 330 340 350
LGCAATLQED KISGKGIQTV RVLPTVSSMQ EINLHGDFEL ISLEAANAKV
360 370 380 390 400
NITKGLIKTF EVKSTATNSS IQVGNEAKIE KLTVNAKVEV KGQGVIQNAK
410 420 430 440 450
INVSGVTMER KPANVETAPG VTLNVVSKEE ADKKTSGNTG ESISQGPAII
460 470 480 490 500
TLPVTTPVLT SPQAPTGLNI KSISTNSIEL NWLPVNGASY YNVYRAFSSA
510 520 530 540 550
GPYKKINTTA IQSTTYTDTN LIAGTAYYYK VSAVNEYGES KLSEAVVATT
560 570 580 590 600
QTAPEGWKLV WSDEFNATPA PGVDENKWTY EIGGGGWGNN ELQYYTNSIK
610 620 630 640 650
NVYIEQDPDN PNNGFLVIKA IKEDYKGYHY TSGRIKTAGK FEFTYGRVEM
660 670 680 690 700
RAKLPYGQGI WPAFWMLGSN INTVGWPNCG EIDIMEFVGK TPTRIYGTIH
710 720 730 740 750
GPGYSGDNSI GAWHEYPKGF TDDFHTYAIE WEPNVIRWYF DGELYQVRTV
760 770 780 790 800
SDLVGKTWVF DHDFYIILNL AIGGNWPGSP DASTVFPQKF VIDYVRVFQR
810 820 830 840 850
ESGEYPAAQY RNLIQIKSIG NGKFVCADKY NGDYLYANRS SAGRWEMFEL
860 870 880 890 900
KDLGNGKVAL ISLLNYKYVS VYGENNSLIP NKESVGLSET FHVVDNGDGT
910 920 930 940 950
KSLKSMINGK YVTIASNSLL TATAETIGEN EKFTFIDCSP PSSPAEVNAT
960 970 980 990 1000
STSNYSVSLS WSPVERATGY NIYRSENSSG PYTKVNATAI TSTTYTDSDV
1010 1020 1030 1040 1050
DAGKTYYYKV SAVNEYGESA LSQAVSATTP VMTTVPAPPT GLMMVSSTED
1060 1070 1080 1090 1100
SIELSWMPVK GALYYNIYRS ATSNGPFEKI NQEGIQNTSY KDTNLNPGSV
1110 1120 1130 1140 1150
YYYKVSAVNS IGESELSEAL FATTTGYGIV TSGTTTKYYS YIIALANSKI
1160 1170 1180 1190 1200
VHADSTSTPL TASANEATTD SELFEIIFKS DGGVGFASKS LNKLVCADTL
1210 1220 1230 1240 1250
NNNNYKLIPR TNYSTTPGGW ETFFIEPQGD GTVAIKANNG GKYVTVDPVT
1260 1270 1280 1290 1300
GILAATSSTV GKNEKFIIVT PQAAGAPGNL TITKTLYNSV SLSWTAPLAS
1310 1320 1330 1340 1350
VITGYNVYRS TTSGGPYTKV NDTLLTSHSY TDTKVSAGTT YYYVVAAVNA
1360 1370 1380 1390 1400
RGEAYSNEVT TTTLNGPLAA VPTGLDIVSS TANSITLTWN EALGAEGYNI
1410 1420 1430 1440 1450
YRSTSRFGKY VKINSTPILS TTYTDENLDR TSYYYRVTAV NENGETDLSE
1460 1470 1480 1490 1500
PISLEMKLFG PNVYIFDPAD DISLVQKVCS DIFAQMERAH FSSDGNGLFN
1510 1520 1530 1540 1550
NRYALLFKPG TYNISLKVGF YTQVAGLGRL PDDTTIQSMT VDAKWKPNNN
1560 1570 1580 1590 1600
ATQNFWRSAE NLAVNSNTMW AVSQAAPLRR VHIRGNLTLH DSGGWSSGGF
1610 1620 1630 1640 1650
LADSKIDGTV YSGSQQQWFS RNDTWGSWNG QVWNMVFVGV DNPPAGTWPA
1660 1670 1680 1690 1700
TKYTTVDQTP IVREKPFLYI DESGNYFVFV PDLKTNSKGI SWSNGMGAGR
1710 1720 1730 1740 1750
SIPLSEFYVA RPETDTAATI NAALEQGKHL LLTPGIYHLT EPIHVTKPNT
1760 1770 1780 1790 1800
VVLGLGFATV VSDNGVTPML IDDVDGVIVA GIIFDAGPVE SKALLQIGTA
1810 1820 1830 1840 1850
GSSADHSANP VCISDVFFRV GGPHLGKTEA CLVINSNNVI GDDLWIWRAD
1860 1870 1880 1890 1900
HGYGVGWDQN TAKNGLIVNG NDVTMYGLMV EHFQEYQTLW NGNGGRTYFY
1910 1920 1930 1940 1950
QSEIPYDVPY QESWMSNNGT VKGYASYKVA DMVTSHEAWG LGIYSYFRDA
1960 1970 1980 1990 2000
DVDLDRAIEV PNHPNVKIHN ACTVMLAGYP GILHVINNTG DPVMVAGQRA
2010 2020 2030 2040 2050
EVTEYCNNVD QPVIVPSTGY YETPQVVTIT CPTEGATIIY TLDGSTPSRT
2060 2070 2080 2090 2100
NGIVYTGPFT VPLGITTIKA MAYKDGMNDS YIAISTLYIG VLSLNKPATA
2110 2120 2130 2140 2150
SSVATNNPGN TPDKAVDGNL NTRWESAYSD PQWITIDLGT VCSINTIEIT
2160 2170 2180 2190 2200
WYSANSYAKD FKIQVSNDNS TWTDVYSVTN LTLSSPYISK INFSSPVTGR
2210 2220
YVRMYGTRRS ASYGYSIKEF VVFGTVAEQ
Length:2,229
Mass (Da):242,510
Last modified:February 8, 2011 - v1
Checksum:i83FBEEF4F14DA35D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002330 Genomic DNA. Translation: ADQ45037.1.
RefSeqiWP_013429194.1. NC_014720.1.

Genome annotation databases

EnsemblBacteriaiADQ45037; ADQ45037; Calkro_0121.
KEGGickn:Calkro_0121.
PATRICifig|632348.3.peg.125.

Similar proteinsi

Entry informationi

Entry nameiE4SCQ4_CALK2
AccessioniPrimary (citable) accession number: E4SCQ4
Entry historyiIntegrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: November 22, 2017
This is version 48 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported