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E4RYK6

- E4RYK6_LEAB4

UniProt

E4RYK6 - E4RYK6_LEAB4

Protein
Submitted name:

2-oxoglutarate dehydrogenase, E1 subunit

Gene

Lbys_3488

Organism
Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 25 (01 Oct 2014)
      Sequence version 1 (08 Feb 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
    2. thiamine pyrophosphate binding Source: InterPro

    GO - Biological processi

    1. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    OxidoreductaseImported

    Enzyme and pathway databases

    BioCyciLBYS649349:GHFA-3541-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    2-oxoglutarate dehydrogenase, E1 subunitImported (EC:1.2.4.2Imported)
    Gene namesi
    Ordered Locus Names:Lbys_3488Imported
    OrganismiLeadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15)Imported
    Taxonomic identifieri649349 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeLeadbetterella
    ProteomesiUP000007435: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliE4RYK6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000259586.
    KOiK00164.
    OMAiGFTTAPH.

    Family and domain databases

    Gene3Di3.40.50.970. 2 hits.
    InterProiIPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view]
    PANTHERiPTHR23152. PTHR23152. 1 hit.
    PfamiPF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTiSM00861. Transket_pyr. 1 hit.
    [Graphical view]
    SUPFAMiSSF52518. SSF52518. 2 hits.
    TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    E4RYK6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDQFSYIANG DVSAIEALYK QYLQDPSSVD KSWQFFFKGY EFNNTWGEGP    50
    GKAGVSSDSL QKEREVVHLI RGYRSRGHLL SQIDPIYSKR KYNANLDLKF 100
    FGLSEADYDT VFEAGVEVFG RPATLRELET FLKNVYGGKI GYEYLYIRDS 150
    KVKNWLRNKV ESDYLNYKPS KEQKLRILGN LNKAVAFENF LHTKFLGKKR 200
    FSLEGGESTI PALDAAIQHG AKLGVEEVVI GMAHRGRLNV LTNIMQKPYE 250
    QVFNEFEENV PTLEFSDGDV KYHMGYSSQV ETVEGHRVSL KLMANPSHLE 300
    TVDPVVLGYA RARADAHFKS EGTKYNSFDD IYDKILPIII HGDASLAGQG 350
    VVYEVNQMSN LPGYYVGGAI HFIINNQIGF TTDNRDARSS IYSSDVAKML 400
    DTPILHVNGD DAEAVVYAME LAIEFRQEFN KDIYIDMICY RKYGHNEADE 450
    PKFTQPGMYE IISKHPSPRE IYIEKLKSDG TITDNDARTL KEQFDNNLQD 500
    LLSKVKQNQL PYELPKLERD WAELRRSTVG DFDSSPRTGI SREEIELVGK 550
    ALSTVPEGFT PIKQIEKVLE ERREIFAGKK PFNWAAAELL AYGSILAEEK 600
    WVRMSGQDVQ RGTFSHRHAI LHDVKTYEAY NNLAHIKPNQ GKFEIYNSLL 650
    SEYAVMGFEY GYALANPNAL VIWEAQFGDF ANGAQIMIDQ FVVAAESKWN 700
    LMNGLVLLLP HGYEGQGPEH SNARPERFLQ LAGEYNIYVC NCTTPANFFH 750
    MLRRQLALPF RKPCVHMSPK SMLRHPMAIS DISEFETGTS FREVIGDADA 800
    DPKKVKRVLL CTGKIYYDLL KRKMDSKRED IAIIRLEQLY PLPKVQLLAE 850
    LEKYAGAEQI WVQEEPLNMG YWSYLRREYP EANWDVISRK ISASPATGYT 900
    KNHNEFQNKI LDKAFE 916
    Length:916
    Mass (Da):104,607
    Last modified:February 8, 2011 - v1
    Checksum:iABE74D2A9E1A4077
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002305 Genomic DNA. Translation: ADQ19136.1.
    RefSeqiYP_003999489.1. NC_014655.1.

    Genome annotation databases

    EnsemblBacteriaiADQ19136; ADQ19136; Lbys_3488.
    GeneIDi9957374.
    KEGGilby:Lbys_3488.
    PATRICi42657107. VBILeaBys116579_3583.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002305 Genomic DNA. Translation: ADQ19136.1 .
    RefSeqi YP_003999489.1. NC_014655.1.

    3D structure databases

    ProteinModelPortali E4RYK6.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADQ19136 ; ADQ19136 ; Lbys_3488 .
    GeneIDi 9957374.
    KEGGi lby:Lbys_3488.
    PATRICi 42657107. VBILeaBys116579_3583.

    Phylogenomic databases

    HOGENOMi HOG000259586.
    KOi K00164.
    OMAi GFTTAPH.

    Enzyme and pathway databases

    BioCyci LBYS649349:GHFA-3541-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.970. 2 hits.
    InterProi IPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view ]
    PANTHERi PTHR23152. PTHR23152. 1 hit.
    Pfami PF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTi SM00861. Transket_pyr. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52518. SSF52518. 2 hits.
    TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 17132.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 17132 / KACC 11308 / 4M15Imported.

    Entry informationi

    Entry nameiE4RYK6_LEAB4
    AccessioniPrimary (citable) accession number: E4RYK6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 8, 2011
    Last sequence update: February 8, 2011
    Last modified: October 1, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3