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E4RYK6

- E4RYK6_LEAB4

UniProt

E4RYK6 - E4RYK6_LEAB4

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Protein
Submitted name:

2-oxoglutarate dehydrogenase, E1 subunit

Gene

Lbys_3488

Organism
Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciLBYS649349:GHFA-3541-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase, E1 subunitImported (EC:1.2.4.2Imported)
Gene namesi
Ordered Locus Names:Lbys_3488Imported
OrganismiLeadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15)Imported
Taxonomic identifieri649349 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeLeadbetterella
ProteomesiUP000007435: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE4RYK6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000259586.
KOiK00164.
OMAiGFTTAPH.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

E4RYK6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDQFSYIANG DVSAIEALYK QYLQDPSSVD KSWQFFFKGY EFNNTWGEGP
60 70 80 90 100
GKAGVSSDSL QKEREVVHLI RGYRSRGHLL SQIDPIYSKR KYNANLDLKF
110 120 130 140 150
FGLSEADYDT VFEAGVEVFG RPATLRELET FLKNVYGGKI GYEYLYIRDS
160 170 180 190 200
KVKNWLRNKV ESDYLNYKPS KEQKLRILGN LNKAVAFENF LHTKFLGKKR
210 220 230 240 250
FSLEGGESTI PALDAAIQHG AKLGVEEVVI GMAHRGRLNV LTNIMQKPYE
260 270 280 290 300
QVFNEFEENV PTLEFSDGDV KYHMGYSSQV ETVEGHRVSL KLMANPSHLE
310 320 330 340 350
TVDPVVLGYA RARADAHFKS EGTKYNSFDD IYDKILPIII HGDASLAGQG
360 370 380 390 400
VVYEVNQMSN LPGYYVGGAI HFIINNQIGF TTDNRDARSS IYSSDVAKML
410 420 430 440 450
DTPILHVNGD DAEAVVYAME LAIEFRQEFN KDIYIDMICY RKYGHNEADE
460 470 480 490 500
PKFTQPGMYE IISKHPSPRE IYIEKLKSDG TITDNDARTL KEQFDNNLQD
510 520 530 540 550
LLSKVKQNQL PYELPKLERD WAELRRSTVG DFDSSPRTGI SREEIELVGK
560 570 580 590 600
ALSTVPEGFT PIKQIEKVLE ERREIFAGKK PFNWAAAELL AYGSILAEEK
610 620 630 640 650
WVRMSGQDVQ RGTFSHRHAI LHDVKTYEAY NNLAHIKPNQ GKFEIYNSLL
660 670 680 690 700
SEYAVMGFEY GYALANPNAL VIWEAQFGDF ANGAQIMIDQ FVVAAESKWN
710 720 730 740 750
LMNGLVLLLP HGYEGQGPEH SNARPERFLQ LAGEYNIYVC NCTTPANFFH
760 770 780 790 800
MLRRQLALPF RKPCVHMSPK SMLRHPMAIS DISEFETGTS FREVIGDADA
810 820 830 840 850
DPKKVKRVLL CTGKIYYDLL KRKMDSKRED IAIIRLEQLY PLPKVQLLAE
860 870 880 890 900
LEKYAGAEQI WVQEEPLNMG YWSYLRREYP EANWDVISRK ISASPATGYT
910
KNHNEFQNKI LDKAFE
Length:916
Mass (Da):104,607
Last modified:February 8, 2011 - v1
Checksum:iABE74D2A9E1A4077
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002305 Genomic DNA. Translation: ADQ19136.1.
RefSeqiYP_003999489.1. NC_014655.1.

Genome annotation databases

EnsemblBacteriaiADQ19136; ADQ19136; Lbys_3488.
GeneIDi9957374.
KEGGilby:Lbys_3488.
PATRICi42657107. VBILeaBys116579_3583.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002305 Genomic DNA. Translation: ADQ19136.1 .
RefSeqi YP_003999489.1. NC_014655.1.

3D structure databases

ProteinModelPortali E4RYK6.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADQ19136 ; ADQ19136 ; Lbys_3488 .
GeneIDi 9957374.
KEGGi lby:Lbys_3488.
PATRICi 42657107. VBILeaBys116579_3583.

Phylogenomic databases

HOGENOMi HOG000259586.
KOi K00164.
OMAi GFTTAPH.

Enzyme and pathway databases

BioCyci LBYS649349:GHFA-3541-MONOMER.

Family and domain databases

Gene3Di 3.40.50.970. 2 hits.
InterProi IPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view ]
PANTHERi PTHR23152. PTHR23152. 1 hit.
Pfami PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view ]
PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTi SM00861. Transket_pyr. 1 hit.
[Graphical view ]
SUPFAMi SSF52518. SSF52518. 2 hits.
TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 17132.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 17132 / KACC 11308 / 4M15Imported.

Entry informationi

Entry nameiE4RYK6_LEAB4
AccessioniPrimary (citable) accession number: E4RYK6
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: October 1, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3