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E4RYK6

- E4RYK6_LEAB4

UniProt

E4RYK6 - E4RYK6_LEAB4

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Protein
Submitted name: 2-oxoglutarate dehydrogenase, E1 subunit
Gene
Lbys_3488
Organism
Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciLBYS649349:GHFA-3541-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase, E1 subunitImported (EC:1.2.4.2Imported)
Gene namesi
Ordered Locus Names:Lbys_3488Imported
OrganismiLeadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15)Imported
Taxonomic identifieri649349 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeLeadbetterella
ProteomesiUP000007435: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE4RYK6.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000259586.
KOiK00164.
OMAiGFTTAPH.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

E4RYK6-1 [UniParc]FASTAAdd to Basket

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MDQFSYIANG DVSAIEALYK QYLQDPSSVD KSWQFFFKGY EFNNTWGEGP    50
GKAGVSSDSL QKEREVVHLI RGYRSRGHLL SQIDPIYSKR KYNANLDLKF 100
FGLSEADYDT VFEAGVEVFG RPATLRELET FLKNVYGGKI GYEYLYIRDS 150
KVKNWLRNKV ESDYLNYKPS KEQKLRILGN LNKAVAFENF LHTKFLGKKR 200
FSLEGGESTI PALDAAIQHG AKLGVEEVVI GMAHRGRLNV LTNIMQKPYE 250
QVFNEFEENV PTLEFSDGDV KYHMGYSSQV ETVEGHRVSL KLMANPSHLE 300
TVDPVVLGYA RARADAHFKS EGTKYNSFDD IYDKILPIII HGDASLAGQG 350
VVYEVNQMSN LPGYYVGGAI HFIINNQIGF TTDNRDARSS IYSSDVAKML 400
DTPILHVNGD DAEAVVYAME LAIEFRQEFN KDIYIDMICY RKYGHNEADE 450
PKFTQPGMYE IISKHPSPRE IYIEKLKSDG TITDNDARTL KEQFDNNLQD 500
LLSKVKQNQL PYELPKLERD WAELRRSTVG DFDSSPRTGI SREEIELVGK 550
ALSTVPEGFT PIKQIEKVLE ERREIFAGKK PFNWAAAELL AYGSILAEEK 600
WVRMSGQDVQ RGTFSHRHAI LHDVKTYEAY NNLAHIKPNQ GKFEIYNSLL 650
SEYAVMGFEY GYALANPNAL VIWEAQFGDF ANGAQIMIDQ FVVAAESKWN 700
LMNGLVLLLP HGYEGQGPEH SNARPERFLQ LAGEYNIYVC NCTTPANFFH 750
MLRRQLALPF RKPCVHMSPK SMLRHPMAIS DISEFETGTS FREVIGDADA 800
DPKKVKRVLL CTGKIYYDLL KRKMDSKRED IAIIRLEQLY PLPKVQLLAE 850
LEKYAGAEQI WVQEEPLNMG YWSYLRREYP EANWDVISRK ISASPATGYT 900
KNHNEFQNKI LDKAFE 916
Length:916
Mass (Da):104,607
Last modified:February 8, 2011 - v1
Checksum:iABE74D2A9E1A4077
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002305 Genomic DNA. Translation: ADQ19136.1.
RefSeqiYP_003999489.1. NC_014655.1.

Genome annotation databases

EnsemblBacteriaiADQ19136; ADQ19136; Lbys_3488.
GeneIDi9957374.
KEGGilby:Lbys_3488.
PATRICi42657107. VBILeaBys116579_3583.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002305 Genomic DNA. Translation: ADQ19136.1 .
RefSeqi YP_003999489.1. NC_014655.1.

3D structure databases

ProteinModelPortali E4RYK6.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADQ19136 ; ADQ19136 ; Lbys_3488 .
GeneIDi 9957374.
KEGGi lby:Lbys_3488.
PATRICi 42657107. VBILeaBys116579_3583.

Phylogenomic databases

HOGENOMi HOG000259586.
KOi K00164.
OMAi GFTTAPH.

Enzyme and pathway databases

BioCyci LBYS649349:GHFA-3541-MONOMER.

Family and domain databases

Gene3Di 3.40.50.970. 2 hits.
InterProi IPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view ]
PANTHERi PTHR23152. PTHR23152. 1 hit.
Pfami PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view ]
PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTi SM00861. Transket_pyr. 1 hit.
[Graphical view ]
SUPFAMi SSF52518. SSF52518. 2 hits.
TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 17132.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 17132 / KACC 11308 / 4M15.

Entry informationi

Entry nameiE4RYK6_LEAB4
AccessioniPrimary (citable) accession number: E4RYK6
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: June 11, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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