ID   E4RY77_LEAB4            Unreviewed;       508 AA.
AC   E4RY77;
DT   08-FEB-2011, integrated into UniProtKB/TrEMBL.
DT   08-FEB-2011, sequence version 1.
DT   27-MAR-2024, entry version 58.
DE   SubName: Full=Lytic transglycosylase catalytic {ECO:0000313|EMBL:ADQ17288.1};
GN   OrderedLocusNames=Lbys_1580 {ECO:0000313|EMBL:ADQ17288.1};
OS   Leadbetterella byssophila (strain DSM 17132 / JCM 16389 / KACC 11308 / NBRC
OS   106382 / 4M15).
OC   Bacteria; Bacteroidota; Cytophagia; Cytophagales; Spirosomataceae;
OC   Leadbetterella.
OX   NCBI_TaxID=649349 {ECO:0000313|EMBL:ADQ17288.1, ECO:0000313|Proteomes:UP000007435};
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 17132;
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA   Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA   Teshima H., Brettin T., Detter J.C., Han C., Tapia R., Land M., Hauser L.,
RA   Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B.,
RA   Pomrenke H.G., Brambilla E., Klenk H.-P., Eisen J.A.;
RT   "The complete genome of Leadbetterella byssophila DSM 17132.";
RL   Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADQ17288.1, ECO:0000313|Proteomes:UP000007435}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 17132 / JCM 16389 / KACC 11308 / NBRC 106382 / 4M15
RC   {ECO:0000313|Proteomes:UP000007435};
RX   PubMed=21475582; DOI=10.4056/sigs.1413518;
RA   Abt B., Teshima H., Lucas S., Lapidus A., Del Rio T.G., Nolan M., Tice H.,
RA   Cheng J.F., Pitluck S., Liolios K., Pagani I., Ivanova N., Mavromatis K.,
RA   Pati A., Tapia R., Han C., Goodwin L., Chen A., Palaniappan K., Land M.,
RA   Hauser L., Chang Y.J., Jeffries C.D., Rohde M., Goker M., Tindall B.J.,
RA   Detter J.C., Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA   Klenk H.P., Kyrpides N.C.;
RT   "Complete genome sequence of Leadbetterella byssophila type strain
RT   (4M15).";
RL   Stand. Genomic Sci. 4:2-12(2011).
CC   -!- SIMILARITY: Belongs to the transglycosylase Slt family.
CC       {ECO:0000256|ARBA:ARBA00007734}.
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DR   EMBL; CP002305; ADQ17288.1; -; Genomic_DNA.
DR   RefSeq; WP_013408337.1; NC_014655.1.
DR   AlphaFoldDB; E4RY77; -.
DR   STRING; 649349.Lbys_1580; -.
DR   CAZy; CBM50; Carbohydrate-Binding Module Family 50.
DR   CAZy; GH23; Glycoside Hydrolase Family 23.
DR   KEGG; lby:Lbys_1580; -.
DR   eggNOG; COG0741; Bacteria.
DR   eggNOG; COG1388; Bacteria.
DR   HOGENOM; CLU_009520_1_0_10; -.
DR   OrthoDB; 9815002at2; -.
DR   Proteomes; UP000007435; Chromosome.
DR   GO; GO:0016020; C:membrane; IEA:InterPro.
DR   GO; GO:0008933; F:lytic transglycosylase activity; IEA:InterPro.
DR   GO; GO:0000270; P:peptidoglycan metabolic process; IEA:InterPro.
DR   CDD; cd00118; LysM; 2.
DR   CDD; cd16894; MltD-like; 1.
DR   Gene3D; 1.10.530.10; -; 1.
DR   Gene3D; 3.10.350.10; LysM domain; 2.
DR   InterPro; IPR018392; LysM_dom.
DR   InterPro; IPR036779; LysM_dom_sf.
DR   InterPro; IPR023346; Lysozyme-like_dom_sf.
DR   InterPro; IPR000189; Transglyc_AS.
DR   InterPro; IPR008258; Transglycosylase_SLT_dom_1.
DR   PANTHER; PTHR33734; LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2; 1.
DR   PANTHER; PTHR33734:SF22; MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE D; 1.
DR   Pfam; PF01476; LysM; 2.
DR   Pfam; PF01464; SLT; 1.
DR   SMART; SM00257; LysM; 2.
DR   SUPFAM; SSF54106; LysM domain; 2.
DR   SUPFAM; SSF53955; Lysozyme-like; 1.
DR   PROSITE; PS51782; LYSM; 2.
DR   PROSITE; PS00922; TRANSGLYCOSYLASE; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000007435}.
FT   DOMAIN          393..436
FT                   /note="LysM"
FT                   /evidence="ECO:0000259|PROSITE:PS51782"
FT   DOMAIN          462..506
FT                   /note="LysM"
FT                   /evidence="ECO:0000259|PROSITE:PS51782"
SQ   SEQUENCE   508 AA;  57922 MW;  C1B5DF8A1DA97B02 CRC64;
     MKLSKLFLAC SVVTVFSGGV WGQINEVEEE PVVVEEVKIS YPYQVQVIDE RDNVPFTITV
     LDPEIIKARL KSIEKTMPMV YNESVAFWLN YFTQRRPNFT KTMMEEMSYY FPIFEKILKQ
     NDMPEELKYL AILESGLNPK AVSRAKAVGL WQFMSFTGKE YGLTINEYVD ERMHPEKSTD
     AACRYLKFLN RMFNDWDLAL ASYNTGQGRI SRAMKKTGLT NYWDLHPHIP KDTRHYVPMF
     ISLAYLMNFG QDHGIVPEKE NVRPPLENIY VDSNVDLQVL ADLTQINLDE LKKYNPHLKA
     TVLPQSKYGY EIALPTTSMA YFSENRAMIL DSIGKRFRSV ETITAPQSEA VLANVIAEPT
     EEGTIIIGRP AAKQQVASNV SQEYVSVTRK VKKVHKVKRG EVLGKIASHY GVSVNDIKKW
     NNKSNTKVVV GESLAIYVDK SEKVKANSLV ANKSSDNVKQ PIIHTVRRGD TLWNISQRYE
     GVSVNDLKKW NNLKGNNVVV GQKIRIRA
//