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E4RY77

- E4RY77_LEAB4

UniProt

E4RY77 - E4RY77_LEAB4

Protein
Submitted name:

Lytic transglycosylase catalytic

Gene

Lbys_1580

Organism
Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 24 (01 Oct 2014)
      Sequence version 1 (08 Feb 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. lytic transglycosylase activity Source: InterPro

    GO - Biological processi

    1. peptidoglycan metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciLBYS649349:GHFA-1601-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Lytic transglycosylase catalyticImported
    Gene namesi
    Ordered Locus Names:Lbys_1580Imported
    OrganismiLeadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15)Imported
    Taxonomic identifieri649349 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeLeadbetterella
    ProteomesiUP000007435: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. membrane Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2222 PotentialImportedAdd
    BLAST
    Chaini23 – 508486 PotentialImportedPRO_5000659587Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliE4RY77.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    HOGENOMiHOG000109501.
    KOiK08307.
    OMAiWAGYNAG.

    Family and domain databases

    Gene3Di3.10.350.10. 2 hits.
    InterProiIPR018392. LysM_dom.
    IPR023346. Lysozyme-like_dom.
    IPR008258. TGlycosylase-like_SLT.
    IPR000189. Transglyc_AS.
    [Graphical view]
    PfamiPF01476. LysM. 2 hits.
    PF01464. SLT. 1 hit.
    [Graphical view]
    SMARTiSM00257. LysM. 2 hits.
    [Graphical view]
    SUPFAMiSSF53955. SSF53955. 1 hit.
    SSF54106. SSF54106. 2 hits.
    PROSITEiPS00922. TRANSGLYCOSYLASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    E4RY77-1 [UniParc]FASTAAdd to Basket

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    MKLSKLFLAC SVVTVFSGGV WGQINEVEEE PVVVEEVKIS YPYQVQVIDE    50
    RDNVPFTITV LDPEIIKARL KSIEKTMPMV YNESVAFWLN YFTQRRPNFT 100
    KTMMEEMSYY FPIFEKILKQ NDMPEELKYL AILESGLNPK AVSRAKAVGL 150
    WQFMSFTGKE YGLTINEYVD ERMHPEKSTD AACRYLKFLN RMFNDWDLAL 200
    ASYNTGQGRI SRAMKKTGLT NYWDLHPHIP KDTRHYVPMF ISLAYLMNFG 250
    QDHGIVPEKE NVRPPLENIY VDSNVDLQVL ADLTQINLDE LKKYNPHLKA 300
    TVLPQSKYGY EIALPTTSMA YFSENRAMIL DSIGKRFRSV ETITAPQSEA 350
    VLANVIAEPT EEGTIIIGRP AAKQQVASNV SQEYVSVTRK VKKVHKVKRG 400
    EVLGKIASHY GVSVNDIKKW NNKSNTKVVV GESLAIYVDK SEKVKANSLV 450
    ANKSSDNVKQ PIIHTVRRGD TLWNISQRYE GVSVNDLKKW NNLKGNNVVV 500
    GQKIRIRA 508
    Length:508
    Mass (Da):57,922
    Last modified:February 8, 2011 - v1
    Checksum:iC1B5DF8A1DA97B02
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002305 Genomic DNA. Translation: ADQ17288.1.
    RefSeqiWP_013408337.1. NC_014655.1.
    YP_003997641.1. NC_014655.1.

    Genome annotation databases

    EnsemblBacteriaiADQ17288; ADQ17288; Lbys_1580.
    GeneIDi9955434.
    KEGGilby:Lbys_1580.
    PATRICi42653127. VBILeaBys116579_1620.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002305 Genomic DNA. Translation: ADQ17288.1 .
    RefSeqi WP_013408337.1. NC_014655.1.
    YP_003997641.1. NC_014655.1.

    3D structure databases

    ProteinModelPortali E4RY77.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADQ17288 ; ADQ17288 ; Lbys_1580 .
    GeneIDi 9955434.
    KEGGi lby:Lbys_1580.
    PATRICi 42653127. VBILeaBys116579_1620.

    Phylogenomic databases

    HOGENOMi HOG000109501.
    KOi K08307.
    OMAi WAGYNAG.

    Enzyme and pathway databases

    BioCyci LBYS649349:GHFA-1601-MONOMER.

    Family and domain databases

    Gene3Di 3.10.350.10. 2 hits.
    InterProi IPR018392. LysM_dom.
    IPR023346. Lysozyme-like_dom.
    IPR008258. TGlycosylase-like_SLT.
    IPR000189. Transglyc_AS.
    [Graphical view ]
    Pfami PF01476. LysM. 2 hits.
    PF01464. SLT. 1 hit.
    [Graphical view ]
    SMARTi SM00257. LysM. 2 hits.
    [Graphical view ]
    SUPFAMi SSF53955. SSF53955. 1 hit.
    SSF54106. SSF54106. 2 hits.
    PROSITEi PS00922. TRANSGLYCOSYLASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 17132.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 17132 / KACC 11308 / 4M15Imported.

    Entry informationi

    Entry nameiE4RY77_LEAB4
    AccessioniPrimary (citable) accession number: E4RY77
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 8, 2011
    Last sequence update: February 8, 2011
    Last modified: October 1, 2014
    This is version 24 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3