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Protein
Submitted name:

Lytic transglycosylase catalytic

Gene

Lbys_1580

Organism
Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciLBYS649349:GHFA-1601-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Lytic transglycosylase catalyticImported
Gene namesi
Ordered Locus Names:Lbys_1580Imported
OrganismiLeadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15)Imported
Taxonomic identifieri649349 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeLeadbetterella
ProteomesiUP000007435 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2222 PotentialImportedAdd
BLAST
Chaini23 – 508486 PotentialImportedPRO_5000659587Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi649349.Lbys_1580.

Structurei

3D structure databases

ProteinModelPortaliE4RY77.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000109501.
KOiK08307.
OMAiTIYPRKP.

Family and domain databases

Gene3Di3.10.350.10. 2 hits.
InterProiIPR018392. LysM_dom.
IPR023346. Lysozyme-like_dom.
IPR008258. TGlycosylase-like_SLT.
IPR000189. Transglyc_AS.
[Graphical view]
PfamiPF01476. LysM. 2 hits.
PF01464. SLT. 1 hit.
[Graphical view]
SMARTiSM00257. LysM. 2 hits.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF54106. SSF54106. 2 hits.
PROSITEiPS00922. TRANSGLYCOSYLASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

E4RY77-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLSKLFLAC SVVTVFSGGV WGQINEVEEE PVVVEEVKIS YPYQVQVIDE
60 70 80 90 100
RDNVPFTITV LDPEIIKARL KSIEKTMPMV YNESVAFWLN YFTQRRPNFT
110 120 130 140 150
KTMMEEMSYY FPIFEKILKQ NDMPEELKYL AILESGLNPK AVSRAKAVGL
160 170 180 190 200
WQFMSFTGKE YGLTINEYVD ERMHPEKSTD AACRYLKFLN RMFNDWDLAL
210 220 230 240 250
ASYNTGQGRI SRAMKKTGLT NYWDLHPHIP KDTRHYVPMF ISLAYLMNFG
260 270 280 290 300
QDHGIVPEKE NVRPPLENIY VDSNVDLQVL ADLTQINLDE LKKYNPHLKA
310 320 330 340 350
TVLPQSKYGY EIALPTTSMA YFSENRAMIL DSIGKRFRSV ETITAPQSEA
360 370 380 390 400
VLANVIAEPT EEGTIIIGRP AAKQQVASNV SQEYVSVTRK VKKVHKVKRG
410 420 430 440 450
EVLGKIASHY GVSVNDIKKW NNKSNTKVVV GESLAIYVDK SEKVKANSLV
460 470 480 490 500
ANKSSDNVKQ PIIHTVRRGD TLWNISQRYE GVSVNDLKKW NNLKGNNVVV

GQKIRIRA
Length:508
Mass (Da):57,922
Last modified:February 8, 2011 - v1
Checksum:iC1B5DF8A1DA97B02
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002305 Genomic DNA. Translation: ADQ17288.1.
RefSeqiWP_013408337.1. NC_014655.1.

Genome annotation databases

EnsemblBacteriaiADQ17288; ADQ17288; Lbys_1580.
KEGGilby:Lbys_1580.
PATRICi42653127. VBILeaBys116579_1620.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002305 Genomic DNA. Translation: ADQ17288.1.
RefSeqiWP_013408337.1. NC_014655.1.

3D structure databases

ProteinModelPortaliE4RY77.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi649349.Lbys_1580.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADQ17288; ADQ17288; Lbys_1580.
KEGGilby:Lbys_1580.
PATRICi42653127. VBILeaBys116579_1620.

Phylogenomic databases

HOGENOMiHOG000109501.
KOiK08307.
OMAiTIYPRKP.

Enzyme and pathway databases

BioCyciLBYS649349:GHFA-1601-MONOMER.

Family and domain databases

Gene3Di3.10.350.10. 2 hits.
InterProiIPR018392. LysM_dom.
IPR023346. Lysozyme-like_dom.
IPR008258. TGlycosylase-like_SLT.
IPR000189. Transglyc_AS.
[Graphical view]
PfamiPF01476. LysM. 2 hits.
PF01464. SLT. 1 hit.
[Graphical view]
SMARTiSM00257. LysM. 2 hits.
[Graphical view]
SUPFAMiSSF53955. SSF53955. 1 hit.
SSF54106. SSF54106. 2 hits.
PROSITEiPS00922. TRANSGLYCOSYLASE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 17132.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 17132 / KACC 11308 / 4M15Imported.

Entry informationi

Entry nameiE4RY77_LEAB4
AccessioniPrimary (citable) accession number: E4RY77
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: July 22, 2015
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.