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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Pseudomonas putida (strain BIRD-1)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei137 – 1371UniRule annotation
Active sitei542 – 5421UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciPPUT931281:GLIU-4001-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotationSAAS annotation (EC:4.1.1.31UniRule annotationSAAS annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:PPUBIRD1_4054Imported
OrganismiPseudomonas putida (strain BIRD-1)Imported
Taxonomic identifieri931281 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000008715: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

KOiK01595.
OMAiCGMGVIA.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E4RGI5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTDIDVRLRE DVHVLGELLG ETIRQQHGDA FLQKIEDIRH SAKADRRGPG
60 70 80 90 100
EQLSSTLADL AEEDLLPVAR AFNQFLNLAN MAEQYQLIRR RNADQPEPFE
110 120 130 140 150
AQVLPELLGR LKQAGHSNDA LARQLAKLDI QLVLTAHPTE VARRTLIQKY
160 170 180 190 200
DAIAGQLAAQ DHRDLTSAER QQVRERLRRL IAEAWHTEEI RRTRPTPVDE
210 220 230 240 250
AKWGFAVIEH SLWHAIPSHL RKVDKALLEA TGLRLPLEAA PIRFASWMGG
260 270 280 290 300
DRDGNPNVTA AVTREVLLLA RWMAADLFLR DIDALAAELS MQQANDALRK
310 320 330 340 350
QVGDSAEPYR AVLKRLRDRL RATRAWAHSA LTSNQPADAD VLVDNRELIA
360 370 380 390 400
PLELCYQSLH ECGMGVIAEG PLLDCLRRAV TFGLFLGRLD VRQDAARHRD
410 420 430 440 450
ALTEITDYLG LGRYADWDEE QRIAFLQAEL KNRRPLLPAH FKPQADTAEV
460 470 480 490 500
LATCREVAAA PAASLGSYVI SMAGAASDVL AVQLLLKEAG LTRPMRVVPL
510 520 530 540 550
FETLADLDNA GPVMQRLLGL PGYRAGLRGP QEVMIGYSDS AKDAGTTAAA
560 570 580 590 600
WAQYRAQENL VRICAEHQVE LLLFHGRGGT VGRGGGPAHA AILSQPPGSV
610 620 630 640 650
AGRLRTTEQG EMIRFKFGLP GIAEQNLNLY LAAVLEATLL PPPPPQPAWR
660 670 680 690 700
EVMDQLAADG VQAYRRVVRE NPDFVEYFRQ STPEQELGRL PLGSRPAKRR
710 720 730 740 750
AGGIESLRAI PWIFGWTQTR LMLPAWLGWE TALTNALARG QGELLAQMRE
760 770 780 790 800
QWPFFRTRID MLEMVLAKAD AQIAEAYDER LVQPHLRPLG AHLRDLLSQS
810 820 830 840 850
CQVVLGLTGQ PVLLAHSPET LEFISLRNTY LDPLHRLQAE LLARSRSREA
860 870
ALDSPLEQAL LVTVAGIAAG LRNTG
Length:875
Mass (Da):97,044
Last modified:February 8, 2011 - v1
Checksum:i59AAF4C076AB8EE0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002290 Genomic DNA. Translation: ADR61636.1.
RefSeqiYP_005931841.1. NC_017530.1.

Genome annotation databases

EnsemblBacteriaiADR61636; ADR61636; PPUBIRD1_4054.
GeneIDi12522234.
KEGGippb:PPUBIRD1_4054.
PATRICi45410190. VBIPsePut176522_4090.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002290 Genomic DNA. Translation: ADR61636.1.
RefSeqiYP_005931841.1. NC_017530.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADR61636; ADR61636; PPUBIRD1_4054.
GeneIDi12522234.
KEGGippb:PPUBIRD1_4054.
PATRICi45410190. VBIPsePut176522_4090.

Phylogenomic databases

KOiK01595.
OMAiCGMGVIA.

Enzyme and pathway databases

BioCyciPPUT931281:GLIU-4001-MONOMER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome of the plant-growth promoting rhizobacteria Pseudomonas putida BIRD-1."
    Matilla M.A., Pizarro P., Roca A., Fernandez M., Duque E., Molina L., van der Lelie D., Gomez M.J., Ramos J.-L.
    Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BIRD-1.
  2. "Complete genome of the plant growth-promoting rhizobacterium Pseudomonas putida BIRD-1."
    Matilla M.A., Pizarro-Tobias P., Roca A., Fernandez M., Duque E., Molina L., Wu X., van der Lelie D., Gomez M.J., Segura A., Ramos J.L.
    J. Bacteriol. 193:1290-1290(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BIRD-1Imported.

Entry informationi

Entry nameiE4RGI5_PSEPB
AccessioniPrimary (citable) accession number: E4RGI5
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: February 4, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.