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E4RGI5

- E4RGI5_PSEPB

UniProt

E4RGI5 - E4RGI5_PSEPB

Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Pseudomonas putida (strain BIRD-1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (08 Feb 2011)
      Previous versions | rss
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    Functioni

    Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

    Catalytic activityi

    Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

    Cofactori

    Magnesium.UniRule annotationSAAS annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei137 – 1371UniRule annotation
    Active sitei542 – 5421UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbon fixation Source: UniProtKB-HAMAP
    2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
    3. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbon dioxide fixationUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, PyruvateImported

    Enzyme and pathway databases

    BioCyciPPUT931281:GLIU-4001-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
    Short name:
    PEPCUniRule annotation
    Short name:
    PEPCaseUniRule annotation
    Gene namesi
    Name:ppcUniRule annotation
    Ordered Locus Names:PPUBIRD1_4054Imported
    OrganismiPseudomonas putida (strain BIRD-1)Imported
    Taxonomic identifieri931281 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000008715: Chromosome

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PEPCase type 1 family.UniRule annotation

    Phylogenomic databases

    KOiK01595.
    OMAiISCQHYR.

    Family and domain databases

    HAMAPiMF_00595. PEPcase_type1.
    InterProiIPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF00311. PEPcase. 1 hit.
    [Graphical view]
    PRINTSiPR00150. PEPCARBXLASE.
    SUPFAMiSSF51621. SSF51621. 1 hit.
    PROSITEiPS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E4RGI5-1 [UniParc]FASTAAdd to Basket

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    MTDIDVRLRE DVHVLGELLG ETIRQQHGDA FLQKIEDIRH SAKADRRGPG    50
    EQLSSTLADL AEEDLLPVAR AFNQFLNLAN MAEQYQLIRR RNADQPEPFE 100
    AQVLPELLGR LKQAGHSNDA LARQLAKLDI QLVLTAHPTE VARRTLIQKY 150
    DAIAGQLAAQ DHRDLTSAER QQVRERLRRL IAEAWHTEEI RRTRPTPVDE 200
    AKWGFAVIEH SLWHAIPSHL RKVDKALLEA TGLRLPLEAA PIRFASWMGG 250
    DRDGNPNVTA AVTREVLLLA RWMAADLFLR DIDALAAELS MQQANDALRK 300
    QVGDSAEPYR AVLKRLRDRL RATRAWAHSA LTSNQPADAD VLVDNRELIA 350
    PLELCYQSLH ECGMGVIAEG PLLDCLRRAV TFGLFLGRLD VRQDAARHRD 400
    ALTEITDYLG LGRYADWDEE QRIAFLQAEL KNRRPLLPAH FKPQADTAEV 450
    LATCREVAAA PAASLGSYVI SMAGAASDVL AVQLLLKEAG LTRPMRVVPL 500
    FETLADLDNA GPVMQRLLGL PGYRAGLRGP QEVMIGYSDS AKDAGTTAAA 550
    WAQYRAQENL VRICAEHQVE LLLFHGRGGT VGRGGGPAHA AILSQPPGSV 600
    AGRLRTTEQG EMIRFKFGLP GIAEQNLNLY LAAVLEATLL PPPPPQPAWR 650
    EVMDQLAADG VQAYRRVVRE NPDFVEYFRQ STPEQELGRL PLGSRPAKRR 700
    AGGIESLRAI PWIFGWTQTR LMLPAWLGWE TALTNALARG QGELLAQMRE 750
    QWPFFRTRID MLEMVLAKAD AQIAEAYDER LVQPHLRPLG AHLRDLLSQS 800
    CQVVLGLTGQ PVLLAHSPET LEFISLRNTY LDPLHRLQAE LLARSRSREA 850
    ALDSPLEQAL LVTVAGIAAG LRNTG 875
    Length:875
    Mass (Da):97,044
    Last modified:February 8, 2011 - v1
    Checksum:i59AAF4C076AB8EE0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002290 Genomic DNA. Translation: ADR61636.1.
    RefSeqiYP_005931841.1. NC_017530.1.

    Genome annotation databases

    EnsemblBacteriaiADR61636; ADR61636; PPUBIRD1_4054.
    GeneIDi12522234.
    KEGGippb:PPUBIRD1_4054.
    PATRICi45410190. VBIPsePut176522_4090.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002290 Genomic DNA. Translation: ADR61636.1 .
    RefSeqi YP_005931841.1. NC_017530.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADR61636 ; ADR61636 ; PPUBIRD1_4054 .
    GeneIDi 12522234.
    KEGGi ppb:PPUBIRD1_4054.
    PATRICi 45410190. VBIPsePut176522_4090.

    Phylogenomic databases

    KOi K01595.
    OMAi ISCQHYR.

    Enzyme and pathway databases

    BioCyci PPUT931281:GLIU-4001-MONOMER.

    Family and domain databases

    HAMAPi MF_00595. PEPcase_type1.
    InterProi IPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF00311. PEPcase. 1 hit.
    [Graphical view ]
    PRINTSi PR00150. PEPCARBXLASE.
    SUPFAMi SSF51621. SSF51621. 1 hit.
    PROSITEi PS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome of the plant-growth promoting rhizobacteria Pseudomonas putida BIRD-1."
      Matilla M.A., Pizarro P., Roca A., Fernandez M., Duque E., Molina L., van der Lelie D., Gomez M.J., Ramos J.-L.
      Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BIRD-1.
    2. "Complete genome of the plant growth-promoting rhizobacterium Pseudomonas putida BIRD-1."
      Matilla M.A., Pizarro-Tobias P., Roca A., Fernandez M., Duque E., Molina L., Wu X., van der Lelie D., Gomez M.J., Segura A., Ramos J.L.
      J. Bacteriol. 193:1290-1290(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BIRD-1Imported.

    Entry informationi

    Entry nameiE4RGI5_PSEPB
    AccessioniPrimary (citable) accession number: E4RGI5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 8, 2011
    Last sequence update: February 8, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3