E4R5S9 (E4R5S9_PSEPB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase RuleBase RU000414
EC=1.15.1.1 RuleBase RU000414

Gene names

Name:	sodA EMBL ADR58681.1
Ordered Locus Names:	PPUBIRD1_0999 EMBL ADR58681.1

Organism

Pseudomonas putida (strain BIRD-1) [Complete proteome] [HAMAP] EMBL ADR58681.1

Taxonomic identifier

931281 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas putida group › Pseudomonas putida

Protein attributes

Sequence length	203 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414
Sequence similarities	Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU000414 EMBL ADR58681.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E4R5S9 [UniParc]. Last modified February 8, 2011. Version 1. Checksum: 61559C69FEFB2D4A	FASTA	203	22,617
	10 20 30 40 50 60 MPHTLPALPY AYDALEPHID AQTMEIHHTK HHQTYVNGLN AALEGTEWAE WPVEKLVAAV 70 80 90 100 110 120 KQLPENLRGA VTNHGGGHAN HSLFWTVMSP QGGGEPVGQL AQAVTAQLGG FEAFKEAFTK 130 140 150 160 170 180 AALTRFGSGW AWLSVTPQKT LMVESSGNQD SPLMHGNAPI LGLDVWEHAY YLKYQNRRPE 190 200 YIGAFYNVID WVEVERRYLE ALK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome of the plant-growth promoting rhizobacteria Pseudomonas putida BIRD-1." Matilla M.A., Pizarro P., Roca A., Fernandez M., Duque E., Molina L., van der Lelie D., Gomez M.J., Ramos J.-L. Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: BIRD-1.
[2]	"Complete genome of the plant growth-promoting rhizobacterium Pseudomonas putida BIRD-1." Matilla M.A., Pizarro-Tobias P., Roca A., Fernandez M., Duque E., Molina L., Wu X., van der Lelie D., Gomez M.J., Segura A., Ramos J.L. J. Bacteriol. 193:1290-1290(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BIRD-1 EMBL ADR58681.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002290 Genomic DNA. Translation: ADR58681.1.
RefSeq	YP_005928886.1. NC_017530.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADR58681; ADR58681; PPUBIRD1_0999.
GeneID	12519233.
KEGG	ppb:PPUBIRD1_0999.
PATRIC	45403876. VBIPsePut176522_1005.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K04564.
Enzyme and pathway databases
BioCyc	PPUT931281:GLIU-1000-MONOMER.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019833. Mn/Fe_SOD_BS. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view]
PIRSF	PIRSF000349. SODismutase. 1 hit.
PRINTS	PR01703. MNSODISMTASE.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
PROSITE	PS00088. SOD_MN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E4R5S9_PSEPB

Accession

Primary (citable) accession number: E4R5S9

Entry history

Integrated into UniProtKB/TrEMBL:	February 8, 2011
Last sequence update:	February 8, 2011
Last modified:	May 29, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)