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E4R5S9 (E4R5S9_PSEPB) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Superoxide dismutase RuleBase RU000414

EC=1.15.1.1 RuleBase RU000414
Gene names
Name:sodA EMBL ADR58681.1
Ordered Locus Names:PPUBIRD1_0999 EMBL ADR58681.1
OrganismPseudomonas putida (strain BIRD-1) [Complete proteome] [HAMAP] EMBL ADR58681.1
Taxonomic identifier931281 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length203 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2.

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
   Molecular functionOxidoreductase RuleBase RU000414 EMBL ADR58681.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processsuperoxide metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

superoxide dismutase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E4R5S9 [UniParc].

Last modified February 8, 2011. Version 1.
Checksum: 61559C69FEFB2D4A

FASTA20322,617
        10         20         30         40         50         60 
MPHTLPALPY AYDALEPHID AQTMEIHHTK HHQTYVNGLN AALEGTEWAE WPVEKLVAAV 

        70         80         90        100        110        120 
KQLPENLRGA VTNHGGGHAN HSLFWTVMSP QGGGEPVGQL AQAVTAQLGG FEAFKEAFTK 

       130        140        150        160        170        180 
AALTRFGSGW AWLSVTPQKT LMVESSGNQD SPLMHGNAPI LGLDVWEHAY YLKYQNRRPE 

       190        200 
YIGAFYNVID WVEVERRYLE ALK 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome of the plant-growth promoting rhizobacteria Pseudomonas putida BIRD-1."
Matilla M.A., Pizarro P., Roca A., Fernandez M., Duque E., Molina L., van der Lelie D., Gomez M.J., Ramos J.-L.
Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BIRD-1.
[2]"Complete genome of the plant growth-promoting rhizobacterium Pseudomonas putida BIRD-1."
Matilla M.A., Pizarro-Tobias P., Roca A., Fernandez M., Duque E., Molina L., Wu X., van der Lelie D., Gomez M.J., Segura A., Ramos J.L.
J. Bacteriol. 193:1290-1290(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BIRD-1 EMBL ADR58681.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002290 Genomic DNA. Translation: ADR58681.1.
RefSeqYP_005928886.1. NC_017530.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADR58681; ADR58681; PPUBIRD1_0999.
GeneID12519233.
KEGGppb:PPUBIRD1_0999.
PATRIC45403876. VBIPsePut176522_1005.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK04564.
OMADYISAFW.

Enzyme and pathway databases

BioCycPPUT931281:GLIU-1000-MONOMER.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE4R5S9_PSEPB
AccessionPrimary (citable) accession number: E4R5S9
Entry history
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: October 16, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)