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E4R2W3

- E4R2W3_BIFLM

UniProt

E4R2W3 - E4R2W3_BIFLM

Protein
Submitted name:

Putative transcriptional regulator

Gene

BBMN68_404

Organism
Bifidobacterium longum subsp. longum (strain BBMN68)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (08 Feb 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. catalytic activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro
    3. sequence-specific DNA binding Source: InterPro

    GO - Biological processi

    1. biosynthetic process Source: InterPro

    Enzyme and pathway databases

    BioCyciBLON890402:GJ8K-408-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative transcriptional regulatorImported
    Gene namesi
    Ordered Locus Names:BBMN68_404Imported
    OrganismiBifidobacterium longum subsp. longum (strain BBMN68)Imported
    Taxonomic identifieri890402 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
    ProteomesiUP000006891: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliE4R2W3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000223042.
    KOiK14260.

    Family and domain databases

    Gene3Di1.10.260.40. 1 hit.
    3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR004839. Aminotransferase_I/II.
    IPR001387. Cro/C1-type_HTH.
    IPR010982. Lambda_DNA-bd_dom.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00155. Aminotran_1_2. 1 hit.
    [Graphical view]
    SMARTiSM00530. HTH_XRE. 1 hit.
    [Graphical view]
    SUPFAMiSSF47413. SSF47413. 1 hit.
    SSF53383. SSF53383. 1 hit.
    PROSITEiPS50943. HTH_CROC1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E4R2W3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSVSVFAERL RNAMNSRGLK QVDLVHAAEH RGVKMGKSHI SQYVAGKTMP    50
    REDVLEFLAS ELDVDTNWLR GEESTTQLNS DASNSVTDGE HAATPLAMGA 100
    AKPQTDSEIP VGRRRTFGKS HKLDNVLYDV RGPVADEAMR MEANGTHILK 150
    LNIGNPAPFG FRTPDEVVYD MAHQLTDTEG YSPSKGLFSA RKAIMQYAQL 200
    KNIPNVTIDD IYTGNGVSEL INLSMSALLD TGDEVLVPSP DYPLWTACVN 250
    LAGGTAVHYL CDEQSEWYPD IDDIRSKITS NTKAIVIINP NNPTGALYPK 300
    EVLQQIVDIA REHQLIIFSD EIYDRLVMDG LQHISIASMA PDLFCVTFSG 350
    LSKSHMIAGY RIGWMILSGN KRIAKDYIEG LNMLANMRMC SNVPAQSVVQ 400
    TALGGHQSVN DYIVPGGRVH DQRDLVYDML NQIPGITAVK PKAAFYIFPK 450
    IDVKRFNIHS DEQFALDLLH DKHILISHGG AFNWHRPDHF RVVYLPRMGM 500
    LRETMGEISD FFSYYWQS 518
    Length:518
    Mass (Da):57,775
    Last modified:February 8, 2011 - v1
    Checksum:i92E8C058E5FC1B7F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002286 Genomic DNA. Translation: ADQ03119.1.
    RefSeqiYP_004000014.1. NC_014656.1.

    Genome annotation databases

    EnsemblBacteriaiADQ03119; ADQ03119; BBMN68_404.
    GeneIDi9958808.
    KEGGiblb:BBMN68_404.
    PATRICi42580342. VBIBifLon171405_0418.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002286 Genomic DNA. Translation: ADQ03119.1 .
    RefSeqi YP_004000014.1. NC_014656.1.

    3D structure databases

    ProteinModelPortali E4R2W3.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADQ03119 ; ADQ03119 ; BBMN68_404 .
    GeneIDi 9958808.
    KEGGi blb:BBMN68_404.
    PATRICi 42580342. VBIBifLon171405_0418.

    Phylogenomic databases

    HOGENOMi HOG000223042.
    KOi K14260.

    Enzyme and pathway databases

    BioCyci BLON890402:GJ8K-408-MONOMER.

    Family and domain databases

    Gene3Di 1.10.260.40. 1 hit.
    3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR004839. Aminotransferase_I/II.
    IPR001387. Cro/C1-type_HTH.
    IPR010982. Lambda_DNA-bd_dom.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00155. Aminotran_1_2. 1 hit.
    [Graphical view ]
    SMARTi SM00530. HTH_XRE. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47413. SSF47413. 1 hit.
    SSF53383. SSF53383. 1 hit.
    PROSITEi PS50943. HTH_CROC1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Bifidobacterium longum subsp. longum BBMN68, a new strain from a healthy chinese centenarian."
      Hao Y., Huang D., Guo H., Xiao M., An H., Zhao L., Zuo F., Zhang B., Hu S., Song S., Chen S., Ren F.
      J. Bacteriol. 193:787-788(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BBMN68Imported.

    Entry informationi

    Entry nameiE4R2W3_BIFLM
    AccessioniPrimary (citable) accession number: E4R2W3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 8, 2011
    Last sequence update: February 8, 2011
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3