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E4R2W3 (E4R2W3_BIFLM) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length518 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
E4R2W3 [UniParc].

Last modified February 8, 2011. Version 1.
Checksum: 92E8C058E5FC1B7F

FASTA51857,775
        10         20         30         40         50         60 
MSVSVFAERL RNAMNSRGLK QVDLVHAAEH RGVKMGKSHI SQYVAGKTMP REDVLEFLAS 

        70         80         90        100        110        120 
ELDVDTNWLR GEESTTQLNS DASNSVTDGE HAATPLAMGA AKPQTDSEIP VGRRRTFGKS 

       130        140        150        160        170        180 
HKLDNVLYDV RGPVADEAMR MEANGTHILK LNIGNPAPFG FRTPDEVVYD MAHQLTDTEG 

       190        200        210        220        230        240 
YSPSKGLFSA RKAIMQYAQL KNIPNVTIDD IYTGNGVSEL INLSMSALLD TGDEVLVPSP 

       250        260        270        280        290        300 
DYPLWTACVN LAGGTAVHYL CDEQSEWYPD IDDIRSKITS NTKAIVIINP NNPTGALYPK 

       310        320        330        340        350        360 
EVLQQIVDIA REHQLIIFSD EIYDRLVMDG LQHISIASMA PDLFCVTFSG LSKSHMIAGY 

       370        380        390        400        410        420 
RIGWMILSGN KRIAKDYIEG LNMLANMRMC SNVPAQSVVQ TALGGHQSVN DYIVPGGRVH 

       430        440        450        460        470        480 
DQRDLVYDML NQIPGITAVK PKAAFYIFPK IDVKRFNIHS DEQFALDLLH DKHILISHGG 

       490        500        510 
AFNWHRPDHF RVVYLPRMGM LRETMGEISD FFSYYWQS 

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References

[1]"Complete genome sequence of Bifidobacterium longum subsp. longum BBMN68, a new strain from a healthy chinese centenarian."
Hao Y., Huang D., Guo H., Xiao M., An H., Zhao L., Zuo F., Zhang B., Hu S., Song S., Chen S., Ren F.
J. Bacteriol. 193:787-788(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BBMN68 EMBL ADQ03119.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002286 Genomic DNA. Translation: ADQ03119.1.
RefSeqYP_004000014.1. NC_014656.1.

3D structure databases

ProteinModelPortalE4R2W3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADQ03119; ADQ03119; BBMN68_404.
GeneID9958808.
KEGGblb:BBMN68_404.
PATRIC42580342. VBIBifLon171405_0418.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000223042.
KOK14260.

Enzyme and pathway databases

BioCycBLON890402:GJ8K-408-MONOMER.

Family and domain databases

Gene3D1.10.260.40. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004839. Aminotransferase_I/II.
IPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SMARTSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMSSF47413. SSF47413. 1 hit.
SSF53383. SSF53383. 1 hit.
PROSITEPS50943. HTH_CROC1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE4R2W3_BIFLM
AccessionPrimary (citable) accession number: E4R2W3
Entry history
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: October 16, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)