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E4R2W3

- E4R2W3_BIFLM

UniProt

E4R2W3 - E4R2W3_BIFLM

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Protein
Submitted name:

Putative transcriptional regulator

Gene
BBMN68_404
Organism
Bifidobacterium longum subsp. longum (strain BBMN68)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro
  3. sequence-specific DNA binding Source: InterPro

GO - Biological processi

  1. biosynthetic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciBLON890402:GJ8K-408-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative transcriptional regulatorImported
Gene namesi
Ordered Locus Names:BBMN68_404Imported
OrganismiBifidobacterium longum subsp. longum (strain BBMN68)Imported
Taxonomic identifieri890402 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
ProteomesiUP000006891: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE4R2W3.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000223042.
KOiK14260.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SMARTiSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53383. SSF53383. 1 hit.
PROSITEiPS50943. HTH_CROC1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E4R2W3-1 [UniParc]FASTAAdd to Basket

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MSVSVFAERL RNAMNSRGLK QVDLVHAAEH RGVKMGKSHI SQYVAGKTMP    50
REDVLEFLAS ELDVDTNWLR GEESTTQLNS DASNSVTDGE HAATPLAMGA 100
AKPQTDSEIP VGRRRTFGKS HKLDNVLYDV RGPVADEAMR MEANGTHILK 150
LNIGNPAPFG FRTPDEVVYD MAHQLTDTEG YSPSKGLFSA RKAIMQYAQL 200
KNIPNVTIDD IYTGNGVSEL INLSMSALLD TGDEVLVPSP DYPLWTACVN 250
LAGGTAVHYL CDEQSEWYPD IDDIRSKITS NTKAIVIINP NNPTGALYPK 300
EVLQQIVDIA REHQLIIFSD EIYDRLVMDG LQHISIASMA PDLFCVTFSG 350
LSKSHMIAGY RIGWMILSGN KRIAKDYIEG LNMLANMRMC SNVPAQSVVQ 400
TALGGHQSVN DYIVPGGRVH DQRDLVYDML NQIPGITAVK PKAAFYIFPK 450
IDVKRFNIHS DEQFALDLLH DKHILISHGG AFNWHRPDHF RVVYLPRMGM 500
LRETMGEISD FFSYYWQS 518
Length:518
Mass (Da):57,775
Last modified:February 8, 2011 - v1
Checksum:i92E8C058E5FC1B7F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002286 Genomic DNA. Translation: ADQ03119.1.
RefSeqiYP_004000014.1. NC_014656.1.

Genome annotation databases

EnsemblBacteriaiADQ03119; ADQ03119; BBMN68_404.
GeneIDi9958808.
KEGGiblb:BBMN68_404.
PATRICi42580342. VBIBifLon171405_0418.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002286 Genomic DNA. Translation: ADQ03119.1 .
RefSeqi YP_004000014.1. NC_014656.1.

3D structure databases

ProteinModelPortali E4R2W3.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADQ03119 ; ADQ03119 ; BBMN68_404 .
GeneIDi 9958808.
KEGGi blb:BBMN68_404.
PATRICi 42580342. VBIBifLon171405_0418.

Phylogenomic databases

HOGENOMi HOG000223042.
KOi K14260.

Enzyme and pathway databases

BioCyci BLON890402:GJ8K-408-MONOMER.

Family and domain databases

Gene3Di 1.10.260.40. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR004839. Aminotransferase_I/II.
IPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00155. Aminotran_1_2. 1 hit.
[Graphical view ]
SMARTi SM00530. HTH_XRE. 1 hit.
[Graphical view ]
SUPFAMi SSF47413. SSF47413. 1 hit.
SSF53383. SSF53383. 1 hit.
PROSITEi PS50943. HTH_CROC1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Bifidobacterium longum subsp. longum BBMN68, a new strain from a healthy chinese centenarian."
    Hao Y., Huang D., Guo H., Xiao M., An H., Zhao L., Zuo F., Zhang B., Hu S., Song S., Chen S., Ren F.
    J. Bacteriol. 193:787-788(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BBMN68Imported.

Entry informationi

Entry nameiE4R2W3_BIFLM
AccessioniPrimary (citable) accession number: E4R2W3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: October 16, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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