E4R2W3 (E4R2W3_BIFLM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative transcriptional regulator EMBL ADQ03119.1

Gene names

Ordered Locus Names:

BBMN68_404 EMBL ADQ03119.1

Organism

Bifidobacterium longum subsp. longum (strain BBMN68) [Complete proteome] [HAMAP]

Taxonomic identifier

890402 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Bifidobacteriales › Bifidobacteriaceae › Bifidobacterium › Bifidobacterium longum › Bifidobacterium longum subsp. longum

Protein attributes

Sequence length	518 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular_function	catalytic activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E4R2W3 [UniParc]. Last modified February 8, 2011. Version 1. Checksum: 92E8C058E5FC1B7F	FASTA	518	57,775
	10 20 30 40 50 60 MSVSVFAERL RNAMNSRGLK QVDLVHAAEH RGVKMGKSHI SQYVAGKTMP REDVLEFLAS 70 80 90 100 110 120 ELDVDTNWLR GEESTTQLNS DASNSVTDGE HAATPLAMGA AKPQTDSEIP VGRRRTFGKS 130 140 150 160 170 180 HKLDNVLYDV RGPVADEAMR MEANGTHILK LNIGNPAPFG FRTPDEVVYD MAHQLTDTEG 190 200 210 220 230 240 YSPSKGLFSA RKAIMQYAQL KNIPNVTIDD IYTGNGVSEL INLSMSALLD TGDEVLVPSP 250 260 270 280 290 300 DYPLWTACVN LAGGTAVHYL CDEQSEWYPD IDDIRSKITS NTKAIVIINP NNPTGALYPK 310 320 330 340 350 360 EVLQQIVDIA REHQLIIFSD EIYDRLVMDG LQHISIASMA PDLFCVTFSG LSKSHMIAGY 370 380 390 400 410 420 RIGWMILSGN KRIAKDYIEG LNMLANMRMC SNVPAQSVVQ TALGGHQSVN DYIVPGGRVH 430 440 450 460 470 480 DQRDLVYDML NQIPGITAVK PKAAFYIFPK IDVKRFNIHS DEQFALDLLH DKHILISHGG 490 500 510 AFNWHRPDHF RVVYLPRMGM LRETMGEISD FFSYYWQS

References

[1]

"Complete genome sequence of Bifidobacterium longum subsp. longum BBMN68, a new strain from a healthy chinese centenarian." Hao Y., Huang D., Guo H., Xiao M., An H., Zhao L., Zuo F., Zhang B., Hu S., Song S., Chen S., Ren F. J. Bacteriol. 193:787-788(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BBMN68 EMBL ADQ03119.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002286 Genomic DNA. Translation: ADQ03119.1.
RefSeq	YP_004000014.1. NC_014656.1.
3D structure databases
ProteinModelPortal	E4R2W3.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADQ03119; ADQ03119; BBMN68_404.
GeneID	9958808.
KEGG	blb:BBMN68_404.
PATRIC	42580342. VBIBifLon171405_0418.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000223042.
KO	K14260.
Enzyme and pathway databases
BioCyc	BLON890402:GJ8K-408-MONOMER.
Family and domain databases
Gene3D	1.10.260.40. 1 hit. 3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR004839. Aminotransferase_I/II. IPR001387. HTH. IPR010982. Lambda_DNA-bd_dom. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Pfam	PF00155. Aminotran_1_2. 1 hit. [Graphical view]
SMART	SM00530. HTH_XRE. 1 hit. [Graphical view]
SUPFAM	SSF47413. Lambda_like_DNA. 1 hit. SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS50943. HTH_CROC1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E4R2W3_BIFLM

Accession

Primary (citable) accession number: E4R2W3

Entry history

Integrated into UniProtKB/TrEMBL:	February 8, 2011
Last sequence update:	February 8, 2011
Last modified:	May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)