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E4QHU6 (E4QHU6_METS6) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tufB EMBL ADQ83490.1
Synonyms:tuf HAMAP-Rule MF_00118
Ordered Locus Names:MPQ_0305 EMBL ADQ83490.1
OrganismMethylovorus sp. (strain MP688) [Complete proteome] [HAMAP] EMBL ADQ83490.1
Taxonomic identifier887061 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaMethylophilalesMethylophilaceaeMethylovorus

Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
E4QHU6 [UniParc].

Last modified February 8, 2011. Version 1.
Checksum: 6235B4D6F15BE665

FASTA39642,781
        10         20         30         40         50         60 
MAKGKFERTK PHVNVGTIGH VDHGKTTLTA AITTILSKKF GGEAKAYDQI DAAPEEKARG 

        70         80         90        100        110        120 
ITINTAHVEY ETATRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI 

       130        140        150        160        170        180 
LLARQVGVPY IVVFMNKADM VDDAELLELV EMEIRELLSK YDFPGDDIPV IKGSALKALE 

       190        200        210        220        230        240 
GDQSEIGEPA IFRLADALDS YIPTPERAVD GTFLMPVEDV FSISGRGTVV TGRIERGIVK 

       250        260        270        280        290        300 
VGDEIEIVGI KPTLKTTCTG VEMFRKLLDQ GQAGDNVGVL LRGTKREEVE RGQVLAKTGS 

       310        320        330        340        350        360 
IKPHTKFSAE IYVLGKDEGG RHTPFFNGYR PQFYFRTTDV TGAVELPAGT EMVMPGDNVS 

       370        380        390 
ITVALIAPIA MEDGLRFAIR EGGRTVGAGV VAKIIE 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of the PQQ high-production bacteria Methylovorus sp. MP688."
Xiong X., Wang J., Zhang W., Yang L., Zhi J., Wang X., Cui Y., Dong F., Li M., Yang Y., Du B.
Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: MP688.
[2]"Complete genome sequence of the bacterium Methylovorus sp. strain MP688, a high-level producer of pyrroloquinolone quinone."
Xiong X.H., Zhi J.J., Yang L., Wang J.H., Zhao Y., Wang X., Cui Y.J., Dong F., Li M.X., Yang Y.X., Wei N., An J.J., Du B.H., Liang L., Zhang J.S., Zhou W., Cheng S.F., He T. expand/collapse author list , Wang L., Chen H.P., Liu D.S., Zhang W.C.
J. Bacteriol. 193:1012-1013(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MP688 EMBL ADQ83490.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002252 Genomic DNA. Translation: ADQ83490.1.
RefSeqYP_004038726.1. NC_014733.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADQ83490; ADQ83490; MPQ_0305.
GeneID9995143.
KEGGmep:MPQ_0305.
PATRIC45262874. VBIMetSp170262_0289.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000229290.
KOK02358.
OMAERKPHIN.

Enzyme and pathway databases

BioCycMSP887061:GHJT-305-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE4QHU6_METS6
AccessionPrimary (citable) accession number: E4QHU6
Entry history
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: June 11, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)