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E4QDP1 (E4QDP1_CALH1) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length471 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
E4QDP1 [UniParc].

Last modified February 8, 2011. Version 1.
Checksum: 8C4A598CD9B76DEC

FASTA47154,852
        10         20         30         40         50         60 
MDFIGLLIRN VFFSLMEIFK GNTIRKKLRI LSQNSRVSQE KIEDVQREEL KKLLLYCIEH 

        70         80         90        100        110        120 
VPAYKKYDYL KKEIEACPER ALKEFPILEK KEFSENRDFY LSEKADLSKC ILNRTGGSTG 

       130        140        150        160        170        180 
EPVKFYMDRE TVEWYEAARY LGLSWWGINI GDRCLMLWAS RSDIGSVKDL KSKIKERILK 

       190        200        210        220        230        240 
NRLIISSWDI NEKTINEIAK RIKKFKPLYI YAYPSAAYKL AYLLKEKGID LNLKLKGVVT 

       250        260        270        280        290        300 
TAENLYEYQR DLIQEVFKCP VINEYGARDG GIIAYQCPKS KLHLMTLTGF YEFVDIEGLE 

       310        320        330        340        350        360 
KEKRKSILVT DLHNYVMPRL RYRLGDVVTL DDEGCDCGIG FPTIKEIDGR IDEMFVTKDG 

       370        380        390        400        410        420 
QVYDSHFFNI LAREMEGVLQ YQLIQHDLEN MTLRIVKGKG FDESEVGRFV ESIKSKFGDI 

       430        440        450        460        470 
SIKIDYVNEI ECGPSGKVRY IVREYKIPAK RALFSFLKIA VSVLTIFTFD L 

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References

« Hide 'large scale' references
[1]"Complete sequence of Caldicellulosiruptor hydrothermalis 108."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N. expand/collapse author list , Blumer-Schuette S.E., Kelly R.M., Woyke T.
Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 108.
[2]"Complete genome sequences for the anaerobic, extremely thermophilic plant biomass-degrading bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensensis, and Caldicellulosiruptor lactoaceticus."
Blumer-Schuette S.E., Ozdemir I., Mistry D., Lucas S., Lapidus A., Cheng J.F., Goodwin L.A., Pitluck S., Land M.L., Hauser L.J., Woyke T., Mikhailova N., Pati A., Kyrpides N.C., Ivanova N., Detter J.C., Walston-Davenport K., Han S., Adams M.W., Kelly R.M.
J. Bacteriol. 193:1483-1484(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 18901 / VKM B-2411 / 108.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002219 Genomic DNA. Translation: ADQ06458.1.
RefSeqYP_003991827.1. NC_014652.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADQ06458; ADQ06458; Calhy_0721.
GeneID9935245.
KEGGchd:Calhy_0721.
PATRIC42584991. VBICalHyd101559_0783.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000017066.
KOK01912.
OMAINEYGAR.

Enzyme and pathway databases

BioCycCHYD632292:GHA8-737-MONOMER.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameE4QDP1_CALH1
AccessionPrimary (citable) accession number: E4QDP1
Entry history
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: May 1, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)