E4QD38 (E4QD38_CALH1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Restriction modification system DNA specificity domain protein EMBL ADQ07532.1

Gene names

Ordered Locus Names:

Calhy_1821

Organism

Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) [Complete proteome] [HAMAP] EMBL ADQ07532.1

Taxonomic identifier

632292 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Thermoanaerobacterales › Thermoanaerobacterales Family III. Incertae Sedis › Caldicellulosiruptor › Caldicellulosiruptor hydrothermalis

Protein attributes

Sequence length	433 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA modification Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E4QD38 [UniParc]. Last modified February 8, 2011. Version 1. Checksum: 81C790D10A3DD740	FASTA	433	49,775
	10 20 30 40 50 60 MDGMSRKNYK FKDSPLGRIP EEWEVVRLGD IAKIKTGNSN VQDAAETGDY LFFDRSGEIK 70 80 90 100 110 120 RSNRYLFDKE AVIVPGEGTE FLPKYYCGKF DLHQRAYAIF DFSSVLSGEY LFYAMHKFNR 130 140 150 160 170 180 ILANWAVGTT VKSLRLPMFE NLLLLLPPLP EQRKIAEILE TIDNAIEKTD AIIEKYKRIK 190 200 210 220 230 240 QGLMQDLLTK GVVSEGEGES ERWRLRDENI DKFKDSPLGR IPEEWKICKL DHREITIMIT 250 260 270 280 290 300 DGSHYSPQPV ENSEYYIVNI ENIINGKIEF ETCKKISPKD YKKLVSNKCN PKYGDVLFTK 310 320 330 340 350 360 DGTVGITLVF SGERNVVLLS SIAIIRPSNC LDSYYLKYSL ETEQIKKQID ILIGGSVLKR 370 380 390 400 410 420 IVLKDIKSLV IFIPPIPEQQ RIASILSQID EAIEKERAYK EKLERIKKGL MEDLLTGKVR 430 VNHLIEEENK DGN

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete sequence of Caldicellulosiruptor hydrothermalis 108." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N. , Blumer-Schuette S.E., Kelly R.M., Woyke T. Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: 108.
[2]	"Complete genome sequences for the anaerobic, extremely thermophilic plant biomass-degrading bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensensis, and Caldicellulosiruptor lactoaceticus." Blumer-Schuette S.E., Ozdemir I., Mistry D., Lucas S., Lapidus A., Cheng J.F., Goodwin L.A., Pitluck S., Land M.L., Hauser L.J., Woyke T., Mikhailova N., Pati A., Kyrpides N.C., Ivanova N., Detter J.C., Walston-Davenport K., Han S., Adams M.W., Kelly R.M. J. Bacteriol. 193:1483-1484(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 18901 / VKM B-2411 / 108.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002219 Genomic DNA. Translation: ADQ07532.1.
RefSeq	YP_003992901.1. NC_014652.1.
3D structure databases
ModBase	Search...
Protein family/group databases
REBASE	28852. S.Chy108ORF1822P.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADQ07532; ADQ07532; Calhy_1821.
GeneID	9936375.
KEGG	chd:Calhy_1821.
PATRIC	42587293. VBICalHyd101559_1909.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000218216.
KO	K01154.
OMA	PLAPYVF.
Enzyme and pathway databases
BioCyc	CHYD632292:GHA8-1867-MONOMER.
Family and domain databases
InterPro	IPR000055. Restrct_endonuc_typeI_HsdS. [Graphical view]
Pfam	PF01420. Methylase_S. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E4QD38_CALH1

Accession

Primary (citable) accession number: E4QD38

Entry history

Integrated into UniProtKB/TrEMBL:	February 8, 2011
Last sequence update:	February 8, 2011
Last modified:	May 1, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)