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E4Q7N4 (E4Q7N4_CALH1) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length239 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ABC transporter superfamily. RuleBase RU000684

Sequences

Sequence LengthMass (Da)Tools
E4Q7N4 [UniParc].

Last modified February 8, 2011. Version 1.
Checksum: 9777C4E0C50C9C92

FASTA23926,890
        10         20         30         40         50         60 
MVKFINVSKR YPNGVLALTN INLTIEKGEF VFLVGSSGAG KSTIVKLLLK EIDPTEGEII 

        70         80         90        100        110        120 
VGEYKLTQLP KREIPYYRRK IGIVFQDFRL LPNKTVYENV EFAMQITGAP AKIIRRQVPY 

       130        140        150        160        170        180 
VLSLVGLAHK AKCYPHELSG GEQQRVALAR AIVNKPNLLV ADEPTGNLDP DTSWEIMRLL 

       190        200        210        220        230 
EDINKRGTTV LVATHAKEIV DSMRKRVVAI DCGRIVKDQP KGVYSYESSD NQVLLQRWI 

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References

« Hide 'large scale' references
[1]"Complete sequence of Caldicellulosiruptor hydrothermalis 108."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Chang Y.-J., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N. expand/collapse author list , Blumer-Schuette S.E., Kelly R.M., Woyke T.
Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 108.
[2]"Complete genome sequences for the anaerobic, extremely thermophilic plant biomass-degrading bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensensis, and Caldicellulosiruptor lactoaceticus."
Blumer-Schuette S.E., Ozdemir I., Mistry D., Lucas S., Lapidus A., Cheng J.F., Goodwin L.A., Pitluck S., Land M.L., Hauser L.J., Woyke T., Mikhailova N., Pati A., Kyrpides N.C., Ivanova N., Detter J.C., Walston-Davenport K., Han S., Adams M.W., Kelly R.M.
J. Bacteriol. 193:1483-1484(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 18901 / VKM B-2411 / 108.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002219 Genomic DNA. Translation: ADQ06674.1.
RefSeqYP_003992043.1. NC_014652.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADQ06674; ADQ06674; Calhy_0945.
GeneID9935476.
KEGGchd:Calhy_0945.
PATRIC42585470. VBICalHyd101559_1018.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK09812.
OMAWKVPSLR.

Enzyme and pathway databases

BioCycCHYD632292:GHA8-968-MONOMER.

Family and domain databases

InterProIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR005286. Cell_div_FtsE_ATP-bd.
[Graphical view]
PfamPF00005. ABC_tran. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
[Graphical view]
TIGRFAMsTIGR02673. FtsE. 1 hit.
PROSITEPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE4Q7N4_CALH1
AccessionPrimary (citable) accession number: E4Q7N4
Entry history
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)