E4PRK9 (E4PRK9_MARAH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pyridoxal-dependent decarboxylase EMBL ADP99106.1

Gene names

Ordered Locus Names:

HP15_3342 EMBL ADP99106.1

Organism

Marinobacter adhaerens (strain HP15) [Complete proteome] [HAMAP] EMBL ADP99106.1

Taxonomic identifier

225937 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Alteromonadaceae › Marinobacter › Marinobacter adhaerens

Protein attributes

Sequence length	558 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carboxylic acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	carboxy-lyase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E4PRK9 [UniParc]. Last modified February 8, 2011. Version 1. Checksum: D0B33DFA4D6A09F3	FASTA	558	62,358
	10 20 30 40 50 60 MTGKKKSAQA SVEAMYRVFT VPEAPESTLS RIDQNISRNL AGFLQEHIVA VERDLSDVEK 70 80 90 100 110 120 DFSDYSIPEK PVFVSEQAQF LLDKLVANSV HTASPAFIGH MTSALPYFML PLSKIMIALN 130 140 150 160 170 180 QNLVKTETSK AFTPMERQVL GMIHRLVYQE DGAFYRKWMH DPRYALGAMC SGGTVANLTA 190 200 210 220 230 240 LWVARNRAFP AEGSFRGLHQ EGLFRALKYY GYEGAAIVVS RRGHYSLRKA ADVLGLGRES 250 260 270 280 290 300 LIPVDTDDEN RINTDALRDK CLELQRQKIK VMAICGVAGT TETGNVDPLD AMADIAREFG 310 320 330 340 350 360 AHFHVDAAWG GPTLFSRTYK HLLRGIEKAD SVTFDAHKQL YVPMGVGLVV FRDPSLASAV 370 380 390 400 410 420 EHHAQYIIRK GSRDLGSTTL EGSRPGMSML IHSGLKILAR EGYEILIDQG IDKAKTFAEM 430 440 450 460 470 480 IEAEPDFELV TRPELNILTY RYCPENVQEA LACADPLQAE KLNTCLNRIT KFIQKTQRER 490 500 510 520 530 540 GKAFVSRTRL EPARYYNFPC IVFRVVLANP LTTKEILADI LSEQRELSRD EGIEDEISIL 550 HQMADAVLKQ AAPNARQA

References

[1]

"Complete genome sequence of Marinobacter adhaerens type strain (HP15)." Gaerdes A.A.M., Kaeppel E., Shezad A., Seebah S., Teeling H., Yarza P., Gloeckner F.O., Ullrich M.S. Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HP15.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001978 Genomic DNA. Translation: ADP99106.1.
RefSeq	YP_005887034.1. NC_017506.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADP99106; ADP99106; HP15_3342.
GeneID	12404213.
KEGG	mad:HP15_3342.
PATRIC	43118951. VBIMarBac104501_3368.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01580.
OMA	CHFHVDA.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR022517. Asp_decarboxylase_pyridox. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E4PRK9_MARAH

Accession

Primary (citable) accession number: E4PRK9

Entry history

Integrated into UniProtKB/TrEMBL:	February 8, 2011
Last sequence update:	February 8, 2011
Last modified:	May 1, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)