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Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

HP15_3342

Organism
Marinobacter adhaerens (strain HP15)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciMADH225937:GLG5-3400-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxal-dependent decarboxylaseImported
Gene namesi
Ordered Locus Names:HP15_3342Imported
OrganismiMarinobacter adhaerens (strain HP15)Imported
Taxonomic identifieri225937 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeMarinobacter
ProteomesiUP000007077 Componenti: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.
OMAiALGAFCS.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

E4PRK9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTGKKKSAQA SVEAMYRVFT VPEAPESTLS RIDQNISRNL AGFLQEHIVA
60 70 80 90 100
VERDLSDVEK DFSDYSIPEK PVFVSEQAQF LLDKLVANSV HTASPAFIGH
110 120 130 140 150
MTSALPYFML PLSKIMIALN QNLVKTETSK AFTPMERQVL GMIHRLVYQE
160 170 180 190 200
DGAFYRKWMH DPRYALGAMC SGGTVANLTA LWVARNRAFP AEGSFRGLHQ
210 220 230 240 250
EGLFRALKYY GYEGAAIVVS RRGHYSLRKA ADVLGLGRES LIPVDTDDEN
260 270 280 290 300
RINTDALRDK CLELQRQKIK VMAICGVAGT TETGNVDPLD AMADIAREFG
310 320 330 340 350
AHFHVDAAWG GPTLFSRTYK HLLRGIEKAD SVTFDAHKQL YVPMGVGLVV
360 370 380 390 400
FRDPSLASAV EHHAQYIIRK GSRDLGSTTL EGSRPGMSML IHSGLKILAR
410 420 430 440 450
EGYEILIDQG IDKAKTFAEM IEAEPDFELV TRPELNILTY RYCPENVQEA
460 470 480 490 500
LACADPLQAE KLNTCLNRIT KFIQKTQRER GKAFVSRTRL EPARYYNFPC
510 520 530 540 550
IVFRVVLANP LTTKEILADI LSEQRELSRD EGIEDEISIL HQMADAVLKQ

AAPNARQA
Length:558
Mass (Da):62,358
Last modified:February 8, 2011 - v1
Checksum:iD0B33DFA4D6A09F3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001978 Genomic DNA. Translation: ADP99106.1.
RefSeqiWP_014578527.1. NC_017506.1.
YP_005887034.1. NC_017506.1.

Genome annotation databases

EnsemblBacteriaiADP99106; ADP99106; HP15_3342.
KEGGimad:HP15_3342.
PATRICi43118951. VBIMarBac104501_3368.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001978 Genomic DNA. Translation: ADP99106.1.
RefSeqiWP_014578527.1. NC_017506.1.
YP_005887034.1. NC_017506.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADP99106; ADP99106; HP15_3342.
KEGGimad:HP15_3342.
PATRICi43118951. VBIMarBac104501_3368.

Phylogenomic databases

KOiK01580.
OMAiALGAFCS.

Enzyme and pathway databases

BioCyciMADH225937:GLG5-3400-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Marinobacter adhaerens type strain (HP15)."
    Gaerdes A.A.M., Kaeppel E., Shezad A., Seebah S., Teeling H., Yarza P., Gloeckner F.O., Ullrich M.S.
    Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HP15Imported.

Entry informationi

Entry nameiE4PRK9_MARAH
AccessioniPrimary (citable) accession number: E4PRK9
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: May 27, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.