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Protein
Submitted name:

ATP dependent DNA ligase

Gene

HP15_3457

Organism
Marinobacter adhaerens (strain HP15)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMADH225937:GLG5-3515-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:HP15_3457Imported
OrganismiMarinobacter adhaerens (strain HP15)Imported
Taxonomic identifieri225937 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeMarinobacter
ProteomesiUP000007077 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK10747.
OMAiVRGYWDG.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E4PFF0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPFRLFSAAL PVLISLLFSS VAVAKQPELT LANVYQKGMP LDGYWVSEKL
60 70 80 90 100
DGVRAYWTGE RFLSRGGHEY RAPGWFTRGF PARPLDGELW MGRGRFAELS
110 120 130 140 150
GAVRQVVPDD NDWRRIRFMV FDLPDKEATF DQRLARLRVL IQEVESPYMA
160 170 180 190 200
LVDQQRASTH EKLMQRLDKM VDGGAEGLML KLGASHYRSG RSDDLLKVKQ
210 220 230 240 250
YQDAEAVVVH HLPGKGKYEG LMGSLLVELD DGRRFRIGTG FSDSERASPP
260 270 280
RPGTTITFKH YGLTATGLPR FASFLRIRND EPAR
Length:284
Mass (Da):32,120
Last modified:February 8, 2011 - v1
Checksum:i7D179334A2B90F14
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001978 Genomic DNA. Translation: ADP99221.1.
RefSeqiYP_005887149.1. NC_017506.1.

Genome annotation databases

EnsemblBacteriaiADP99221; ADP99221; HP15_3457.
KEGGimad:HP15_3457.
PATRICi43119181. VBIMarBac104501_3483.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001978 Genomic DNA. Translation: ADP99221.1.
RefSeqiYP_005887149.1. NC_017506.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADP99221; ADP99221; HP15_3457.
KEGGimad:HP15_3457.
PATRICi43119181. VBIMarBac104501_3483.

Phylogenomic databases

KOiK10747.
OMAiVRGYWDG.

Enzyme and pathway databases

BioCyciMADH225937:GLG5-3515-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Marinobacter adhaerens type strain (HP15)."
    Gaerdes A.A.M., Kaeppel E., Shezad A., Seebah S., Teeling H., Yarza P., Gloeckner F.O., Ullrich M.S.
    Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HP15Imported.

Entry informationi

Entry nameiE4PFF0_MARAH
AccessioniPrimary (citable) accession number: E4PFF0
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: April 1, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.