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E4PFF0 (E4PFF0_MARAH) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
ATP dependent DNA ligase EMBL ADP99221.1
EC=6.5.1.1 EMBL ADP99221.1
Gene names
Ordered Locus Names:HP15_3457 EMBL ADP99221.1
OrganismMarinobacter adhaerens (strain HP15) [Complete proteome] [HAMAP] EMBL ADP99221.1
Taxonomic identifier225937 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Alteromonadaceae › Marinobacter ›

Protein attributes

Sequence length284 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ADP99221.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E4PFF0 [UniParc].

Last modified February 8, 2011. Version 1.
Checksum: 7D179334A2B90F14

FASTA28432,120
        10         20         30         40         50         60 
MPFRLFSAAL PVLISLLFSS VAVAKQPELT LANVYQKGMP LDGYWVSEKL DGVRAYWTGE 

        70         80         90        100        110        120 
RFLSRGGHEY RAPGWFTRGF PARPLDGELW MGRGRFAELS GAVRQVVPDD NDWRRIRFMV 

       130        140        150        160        170        180 
FDLPDKEATF DQRLARLRVL IQEVESPYMA LVDQQRASTH EKLMQRLDKM VDGGAEGLML 

       190        200        210        220        230        240 
KLGASHYRSG RSDDLLKVKQ YQDAEAVVVH HLPGKGKYEG LMGSLLVELD DGRRFRIGTG 

       250        260        270        280 
FSDSERASPP RPGTTITFKH YGLTATGLPR FASFLRIRND EPAR

« Hide

References

[1]"Complete genome sequence of Marinobacter adhaerens type strain (HP15)."
Gaerdes A.A.M., Kaeppel E., Shezad A., Seebah S., Teeling H., Yarza P., Gloeckner F.O., Ullrich M.S.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HP15.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001978 Genomic DNA. Translation: ADP99221.1.
RefSeqYP_005887149.1. NC_017506.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADP99221; ADP99221; HP15_3457.
GeneID12403152.
KEGGmad:HP15_3457.
PATRIC43119181. VBIMarBac104501_3483.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMAVRGYWDG.

Enzyme and pathway databases

BioCycMADH225937:GLG5-3515-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE4PFF0_MARAH
AccessionPrimary (citable) accession number: E4PFF0
Entry history
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: May 29, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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