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E4P0F9 (E4P0F9_BIFBP) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length834 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
E4P0F9 [UniParc].

Last modified February 8, 2011. Version 1.
Checksum: B71938613C6AF157

FASTA83486,833
        10         20         30         40         50         60 
MVRSTKPSLL RRFGALVAAA AMLVVLPAGV STASAASDDA DMLTVTMTRT DALGDEVYVG 

        70         80         90        100        110        120 
DTLTYSFTNT NNTSSAFTAF PAESNLSGVL TTGTPNCRYE NLAGGASYPC STASHTITAD 

       130        140        150        160        170        180 
DLTAGSFTPR TVWKATSDRG GTQVLQDNIV STGDTVTVKE GKRPDPATIP TDRADGEAVR 

       190        200        210        220        230        240 
LATARQNLGT ECYRIPALAE APNGWILAAF DQRPNTAMAN GSGVKCWDAP QPNSIVQRIS 

       250        260        270        280        290        300 
KDGGKSWTPI QYVAQGKNAP ERYGYSDPSY VVDKETGEIF LFFVHSYNKG FADSQLGVDE 

       310        320        330        340        350        360 
SNRNVLHAVV VSSKDNGETW SKPRDITADI TKGYENEWKS RFATSGAGIQ LKYGKYKGRL 

       370        380        390        400        410        420 
IQQYAVGRTT GSNAAVSVYS DDHGKTWQAG NPVTGMLMDE NKVVELSDGR VMLNSRPGNG 

       430        440        450        460        470        480 
SGYRRVAISE DGGVNYGTVK NETQLPDPNN NAHITRAFPN APEGSAKAKV LLYSSPRANN 

       490        500        510        520        530        540 
EGRANGVVRI SLDDGTTWSS GKLYKEGSMA YSVITALSGA AGGGYGLLYE GAWVTGGGID 

       550        560        570        580        590        600 
SHDIMYTHIS MDWLGYLSAT ADDVTASVEE GASTVDVTVP VSNVGSVDYT GVTVTPADLP 

       610        620        630        640        650        660 
TGWSASPVNV GALASGASKD VTVTVNVPAT AKKDDVAKIV LRVTGTSAAN ANATTGFDGS 

       670        680        690        700        710        720 
ITVNVTEKSE PDPEPEPTIT GVSAVTSQAG VKVGDVFDAS KVSVTAAMSD GSSKALAAGE 

       730        740        750        760        770        780 
YSLSAVDADG KAVDLAEPFA AAGVVTVTVS VPVEGADPLT ASFTIDVAEK SADPEPKPEP 

       790        800        810        820        830 
KPEPEKPAGP KVDVPTEKPG LSKTGASTAG MSIVFVLLAL SGVAALSLRR RSVH 

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References

[1]"Genome analysis of Bifidobacterium bifidum PRL2010 reveals metabolic pathways for host-derived glycan foraging."
Turroni F., Bottacini F., Foroni E., Mulder I., Kim J.H., Zomer A., Sanchez B., Bidossi A., Ferrarini A., Giubellini V., Delledonne M., Henrissat B., Coutinho P., Oggioni M., Fitzgerald G.F., Mills D., Margolles A., Kelly D., van Sinderen D., Ventura M.
Proc. Natl. Acad. Sci. U.S.A. 107:19514-19519(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PRL2010 EMBL ADP36807.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001840 Genomic DNA. Translation: ADP36807.1.
RefSeqYP_003971844.1. NC_014638.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADP36807; ADP36807; BBPR_1794.
GeneID9889913.
KEGGbbp:BBPR_1794.
PATRIC42579374. VBIBifBif153886_1853.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000166245.
KOK01186.

Enzyme and pathway databases

BioCycBBIF702459:GHBC-1737-MONOMER.

Family and domain databases

Gene3D2.120.10.10. 1 hit.
InterProIPR018905. A-galactase_NEW3.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
PfamPF10633. NPCBM_assoc. 1 hit.
[Graphical view]
SUPFAMSSF50939. SSF50939. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE4P0F9_BIFBP
AccessionPrimary (citable) accession number: E4P0F9
Entry history
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: October 16, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)