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E4NYC0 (E4NYC0_BIFBP) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:BBPR_1403 EMBL ADP36447.1
OrganismBifidobacterium bifidum (strain PRL2010) [Complete proteome] [HAMAP] EMBL ADP36447.1
Taxonomic identifier702459 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium

Protein attributes

Sequence length288 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

isomerase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E4NYC0 [UniParc].

Last modified February 8, 2011. Version 1.
Checksum: 54A9FC47F619965A

FASTA28831,680
        10         20         30         40         50         60 
MITTFTIRNV ANEDGAAQIS DFGAHVLSWT PAGGHPAVWQ PKAVYLGKPI RGGVPVVLPW 

        70         80         90        100        110        120 
FALGFEHGEI AGKKPKHGFA RTTVWHVDED ATDDRRIRYT LSDADATPEL LAQLHSGASP 

       130        140        150        160        170        180 
RFHAVYDIEV GKELTMTLTI TNDGTEPLRY ETALHTHFHV GDLTQVSLHG LEGSDYLDAT 

       190        200        210        220        230        240 
VAGYPPRVQP DEPVTFDGTT VDRIYYSTDT LRLDDPAWDR VIVIEAHGTK QTVTWNPGTA 

       250        260        270        280 
ADTEIGDMQP GEWRDFVAIE AAACREYAIE LAPGESHALT QRISVENR 

« Hide

References

[1]"Genome analysis of Bifidobacterium bifidum PRL2010 reveals metabolic pathways for host-derived glycan foraging."
Turroni F., Bottacini F., Foroni E., Mulder I., Kim J.H., Zomer A., Sanchez B., Bidossi A., Ferrarini A., Giubellini V., Delledonne M., Henrissat B., Coutinho P., Oggioni M., Fitzgerald G.F., Mills D., Margolles A., Kelly D., van Sinderen D., Ventura M.
Proc. Natl. Acad. Sci. U.S.A. 107:19514-19519(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PRL2010 EMBL ADP36447.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001840 Genomic DNA. Translation: ADP36447.1.
RefSeqYP_003971484.1. NC_014638.1.

3D structure databases

ProteinModelPortalE4NYC0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADP36447; ADP36447; BBPR_1403.
GeneID9889532.
KEGGbbp:BBPR_1403.
PATRIC42578542. VBIBifBif153886_1452.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000283048.
KOK01792.

Enzyme and pathway databases

BioCycBBIF702459:GHBC-1356-MONOMER.

Family and domain databases

Gene3D2.70.98.10. 1 hit.
InterProIPR008183. Aldose_1/G6P_1-epimerase.
IPR025532. G6P_1-epimerase.
IPR011013. Gal_mutarotase_SF_dom.
IPR014718. Glyco_hydro-type_carb-bd_sub.
[Graphical view]
PfamPF01263. Aldose_epim. 1 hit.
[Graphical view]
PIRSFPIRSF016020. PHexose_mutarotase. 1 hit.
SUPFAMSSF74650. SSF74650. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE4NYC0_BIFBP
AccessionPrimary (citable) accession number: E4NYC0
Entry history
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: October 16, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)