E4NV87 (E4NV87_HALBP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Chitinase EMBL ADQ69076.1

Gene names

Ordered Locus Names:	Hbor_35560 EMBL ADQ69076.1
ORF Names:	C499_06175 EMBL ELY29422.1

Encoded on

Plasmid pHBOR02 Ref.1 Ref.2 EMBL ADQ69076.1

Organism

Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) [Complete proteome] [HAMAP]

Taxonomic identifier

469382 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Halobacteria › Halobacteriales › Halobacteriaceae › Halogeometricum › Halogeometricum borinquense

Protein attributes

Sequence length	540 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ADQ69076.1
Technical term	Complete proteome Plasmid EMBL ADQ69076.1
Gene Ontology (GO)
Biological_process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro chitin catabolic process Inferred from electronic annotation. Source: InterPro
Cellular_component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular_function	carbohydrate binding Inferred from electronic annotation. Source: InterPro chitinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 27	27	Potential EMBL ADQ69076.1
	Chain	28 – 540	513	Potential EMBL ADQ69076.1		PRO_5000657804

Sequences

	Sequence		Length	Mass (Da)
	E4NV87 [UniParc]. Last modified February 8, 2011. Version 1. Checksum: 7F97A9FA24D66C04	FASTA	540	59,813
	10 20 30 40 50 60 MKQSRRDYLR NTSALFALLG GAGTAAAAET LPKWDPEATY TGGDRVTHDG YIWEAKWWTR 70 80 90 100 110 120 GTEPTTDASV WKQIKPVDDG GDGPKASFTV SDLVINPGET VEFDASGSGD TATQFDWDFG 130 140 150 160 170 180 DGTTGSGEVV SHTYESAGEY TVTLTVTDDS GATGSTTKVV TASDGGMPTD KRVVGYYMQW 190 200 210 220 230 240 AQWDREYTPG DIPLDKVTHV NYAFLTVKQD GSVAYINENA AMRVLKPESW HDHKGFNELV 250 260 270 280 290 300 DDPTTKFLFS IGGWNDSKYF SNAAETEASR QRFAKTAVEI MREHNFDGLD IDWEYPGGGG 310 320 330 340 350 360 KSGNIVRDGD KKRYSDLLAA VRAELDAAEE EDGQEYLLTT ALSADPKKNE GLDHQRNTGL 370 380 390 400 410 420 LDFVNVMTYD FHGAFDDYTN HQSPLYFKEN DPSPRAEDFN VDAAMTYWAN TAFDSSQLSM 430 440 450 460 470 480 GLPFYGRSFG NVASSDNGGL YQSFEGSPDG TWGQDNGIME FWDINQNLEP SSEYEYYWDD 490 500 510 520 530 540 TAKVPWIYSD SSDVLVSYDN PKSIGLKTDY AVDNDIGGMM FWAFSGDKNE VLLDTLLEHL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of Halogeometricum borinquense type strain (PR3)." Malfatti S., Tindall B.J., Schneider S., Fahnrich R., Lapidus A., Labuttii K., Copeland A., Glavina Del Rio T., Nolan M., Chen F., Lucas S., Tice H., Cheng J.F., Bruce D., Goodwin L., Pitluck S., Anderson I., Pati A. , Ivanova N., Mavromatis K., Chen A., Palaniappan K., D'haeseleer P., Goker M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P., Chain P. Stand. Genomic Sci. 1:150-159(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700274 / DSM 11551 / JCM 10706 / PR3.
[2]	"The complete plasmid2 of Halogeometricum borinquense DSM 11551." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Mikhailova N., Anderson I., Brettin T., Detter J.C., Han C., Larimer F., Land M. , Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindal B., Klenk H.-P., Eisen J.A. Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	Becker E.A., Seitzer P., Tritt A., Larsen D., Yao A., Wu D., Darling A., Eisen J.A., Facciotti M.T. Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: DSM 11551 EMBL ELY29422.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001692 Genomic DNA. Translation: ADQ69076.1. AOHT01000017 Genomic DNA. Translation: ELY29422.1.
RefSeq	YP_004038212.1. NC_014731.1.
3D structure databases
ProteinModelPortal	E4NV87.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADQ69076; ADQ69076; Hbor_35560.
GeneID	9988869.
KEGG	hbo:Hbor_35560.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000038265.
KO	K01183.
Family and domain databases
Gene3D	2.10.10.20. 1 hit. 2.60.40.670. 1 hit. 3.20.20.80. 2 hits.
InterPro	IPR003610. CBM_fam5/12. IPR011583. Chitinase_II. IPR001223. Glyco_hydro18cat. IPR001579. Glyco_hydro_18_chit_AS. IPR013781. Glyco_hydro_catalytic_dom. IPR017853. Glycoside_hydrolase_SF. IPR022409. PKD/Chitinase_dom. IPR000601. PKD_dom. IPR006311. TAT_signal. [Graphical view]
Pfam	PF02839. CBM_5_12. 1 hit. PF00704. Glyco_hydro_18. 1 hit. PF00801. PKD. 1 hit. [Graphical view]
SMART	SM00495. ChtBD3. 1 hit. SM00636. Glyco_18. 1 hit. SM00089. PKD. 1 hit. [Graphical view]
SUPFAM	SSF51055. CBM_5_12. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit. SSF49299. PKD. 1 hit.
PROSITE	PS01095. CHITINASE_18. 1 hit. PS50093. PKD. 1 hit. PS51318. TAT. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E4NV87_HALBP

Accession

Primary (citable) accession number: E4NV87

Entry history

Integrated into UniProtKB/TrEMBL:	February 8, 2011
Last sequence update:	February 8, 2011
Last modified:	May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)