E4NPX6 (E4NPX6_HALBP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribulose 1,5-bisphosphate carboxylase large subunit EMBL ADQ67721.1

Submitted name:
Ribulose bisophosphate carboxylase EMBL ELY23598.1
EC=4.1.1.39 EMBL ELY23598.1

Gene names

Name:	rbcL EMBL ELY23598.1
Ordered Locus Names:	Hbor_21570 EMBL ADQ67721.1
ORF Names:	C499_17644 EMBL ELY23598.1

Organism

Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) [Complete proteome] [HAMAP]

Taxonomic identifier

469382 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Halobacteria › Halobacteriales › Halobacteriaceae › Halogeometricum › Halogeometricum borinquense

Protein attributes

Sequence length	420 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
Molecular function	Lyase EMBL ELY23598.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: InterPro
Molecular_function	magnesium ion binding Inferred from electronic annotation. Source: InterPro ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E4NPX6 [UniParc]. Last modified February 8, 2011. Version 1. Checksum: 4CF3B80193853A63	FASTA	420	44,775
	10 20 30 40 50 60 MAGITYEDFL DLSYEPDESD LVCTFRIAPA EGMDVEAAAS RVASESSNGT WAALPTGEGF 70 80 90 100 110 120 TDMGATTFDI RGSDDSAEVD VAYPAGLFEP GSMPQILSCI AGNIMGMKAV DTIRLADCQW 130 140 150 160 170 180 PEALVSSFAG PQFGSSVREE IFGIEEDRPI LATVPKPKVG LSTDRHAEVG YEAWLGGVDL 190 200 210 220 230 240 LKDDENLTDQ SFNPYHDRLV ESLALRDDAE DETGEKKSYL INVTADTNTM LERVDLAAEE 250 260 270 280 290 300 GCEYVMVDVI TTGWAAVQTV RERCEDHGIA IHAHRAMHAA FDRLENHGVS MRVLAQISRL 310 320 330 340 350 360 CGVDQLHTGT AGLGKLANED TVGINDWMRS ELYGLNDVLP VASGGLHPGL IPDLLDATGT 370 380 390 400 410 420 NVCVQAGGGI HGHPDGTRAG AAALRAAVDG YAAGKSLEES ADDSPELATA IDEWGTETPR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of Halogeometricum borinquense type strain (PR3)." Malfatti S., Tindall B.J., Schneider S., Fahnrich R., Lapidus A., Labuttii K., Copeland A., Glavina Del Rio T., Nolan M., Chen F., Lucas S., Tice H., Cheng J.F., Bruce D., Goodwin L., Pitluck S., Anderson I., Pati A. , Ivanova N., Mavromatis K., Chen A., Palaniappan K., D'haeseleer P., Goker M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P., Chain P. Stand. Genomic Sci. 1:150-159(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700274 / DSM 11551 / JCM 10706 / PR3.
[2]	"The complete chromome of Halogeometricum borinquense DSM 11551." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Mikhailova N., Anderson I., Brettin T., Detter J.C., Han C., Larimer F., Land M. , Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindal B., Klenk H.-P., Eisen J.A. Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	Becker E.A., Seitzer P., Tritt A., Larsen D., Yao A., Wu D., Darling A., Eisen J.A., Facciotti M.T. Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: DSM 11551 EMBL ELY23598.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001690 Genomic DNA. Translation: ADQ67721.1. AOHT01000051 Genomic DNA. Translation: ELY23598.1.
RefSeq	YP_004037166.1. NC_014729.1.
3D structure databases
ProteinModelPortal	E4NPX6.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADQ67721; ADQ67721; Hbor_21570.
GeneID	9993976.
KEGG	hbo:Hbor_21570.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000230831.
KO	K01601.
Family and domain databases
Gene3D	3.20.20.110. 1 hit. 3.30.70.150. 1 hit.
InterPro	IPR017712. RuBisCO_III. IPR000685. RuBisCO_lsu_C. IPR017443. RuBisCO_lsu_fd_N. IPR017444. RuBisCO_lsu_N. [Graphical view]
Pfam	PF00016. RuBisCO_large. 1 hit. PF02788. RuBisCO_large_N. 1 hit. [Graphical view]
SUPFAM	SSF51649. RuBisCO_large. 1 hit. SSF54966. RuBisCO_large. 1 hit.
TIGRFAMs	TIGR03326. rubisco_III. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E4NPX6_HALBP

Accession

Primary (citable) accession number: E4NPX6

Entry history

Integrated into UniProtKB/TrEMBL:	February 8, 2011
Last sequence update:	February 8, 2011
Last modified:	May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)