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Protein

Alpha-amylase

Gene

KSE_23300

Organism
Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro
  3. starch binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciKSET452652:GJFD-2313-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:KSE_23300Imported
OrganismiKitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae)Imported
Taxonomic identifieri452652 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeKitasatospora
ProteomesiUP000007076 Componenti: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.
OMAiGQNIFVV.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR005085. CBM_fam25.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR006311. TAT_signal.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
PF03423. CBM_25. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMiSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51166. CBM20. 1 hit.
PS51318. TAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E4NAB8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPTSAPTRRR RLAAAGTALA ALGLSVGAGF ALAPTATATP PGGKDVTATL
60 70 80 90 100
FEWKFDSVAK ACTDTLGPKG YGFVEVSPAE EHVQGSQWWT SYQPVSYKIA
110 120 130 140 150
GRLGDRASFR NMVAACHAAG VKVIADAVVN HMSAGSGTGT GGTNYTKYTY
160 170 180 190 200
PGYYQDQDFH SCRTSISNYG DRSNVQNCEL VGLSDLNTGS AYVQQTIADY
210 220 230 240 250
LSDLLTLGVD GFRIDAAKHI AASDLAAIKS KVSNPNAYWV QEVIYGAGEA
260 270 280 290 300
VQPGEYTGTG DVDEFRSATW LKSAFNGGRI SDLQSWGSGL LGSAQARTFV
310 320 330 340 350
DNWDTERNGS TLTYKYGSAY TLANVFMLAN PYGSPNVYSG YAFSGNDDGP
360 370 380 390 400
PNGGTVNACY QDGWNCTHAW RQVANMVGFR NAVAGTGLTN WWSNGNNAIG
410 420 430 440 450
FGRGDKGYVA INRESGAITQ TFQTSLPAGV YCDVQHGDPV NGGGCTGPTH
460 470 480 490 500
TVGTDGRFTA TVGAGDAVAL YVGAGGGSAA TPTPTPSASA SASASATGTG
510 520 530 540 550
NSATVFYSTN RNWSAYDLHY APTGGSWTTV PGVAMDAACT GWVKKTVALG
560 570 580 590 600
GATGLTATFN NGNGTWDNNG GNNYPLGAGN VTVKDGAVGS GDPCATASAS
610 620 630 640 650
ASASASPSAT AAPSVGTGAS FAVNATTVVG QNIYVVGDAA ELGGWDTSKA
660 670 680 690 700
LPLSAAAYPV WKLDAALNPG TAIQYKYVRK DAAGNVTWES GANRTATVPA
710
SGKVVLNDTW RG
Length:712
Mass (Da):73,132
Last modified:February 8, 2011 - v1
Checksum:i1F0B6CD6C11DF81B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP010968 Genomic DNA. Translation: BAJ28149.1.
RefSeqiWP_014135465.1. NC_016109.1.
YP_004904105.1. NC_016109.1.

Genome annotation databases

EnsemblBacteriaiBAJ28149; BAJ28149; KSE_23300.
KEGGiksk:KSE_23300.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP010968 Genomic DNA. Translation: BAJ28149.1.
RefSeqiWP_014135465.1. NC_016109.1.
YP_004904105.1. NC_016109.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAJ28149; BAJ28149; KSE_23300.
KEGGiksk:KSE_23300.

Phylogenomic databases

KOiK01176.
OMAiGQNIFVV.

Enzyme and pathway databases

BioCyciKSET452652:GJFD-2313-MONOMER.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR005085. CBM_fam25.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR006311. TAT_signal.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
PF03423. CBM_25. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMiSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51166. CBM20. 1 hit.
PS51318. TAT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054Imported.

Entry informationi

Entry nameiE4NAB8_KITSK
AccessioniPrimary (citable) accession number: E4NAB8
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: April 1, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.